RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 WNK1Q9H4A3 2382 aa3.01□□□□□ -1.93
PRKD3-210ENST00000494667 MMP24-AS1A0A0U1RRL7 71 aa3.01□□□□□ -1.93
PRKD3-210ENST00000494667 PRB1P04280 392 aa3.01□□□□□ -1.93
PRKD3-210ENST00000494667 KHDC1LQ5JSQ8 128 aa3.01□□□□□ -1.93
PRKD3-210ENST00000494667 PRR26Q8N8Z3 221 aa3□□□□□ -1.93
PRKD3-210ENST00000494667 DEFB130BP0DP73 79 aa3□□□□□ -1.93
PRKD3-210ENST00000494667 DEFB130AP0DP74 79 aa3□□□□□ -1.93
PRKD3-210ENST00000494667 CEP290O15078 2479 aa3□□□□□ -1.93
PRKD3-210ENST00000494667 HRES1P13985 223 aa3□□□□□ -1.93
PRKD3-210ENST00000494667 ZDBF2Q9HCK1 2354 aa3□□□□□ -1.93
PRKD3-210ENST00000494667 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3□□□□□ -1.939e-9■■■■□ 26.2
PRKD3-210ENST00000494667 COL6A6A6NMZ7 2263 aa3□□□□□ -1.93
PRKD3-210ENST00000494667 SERTAD4-AS1Q5TG53 156 aa3□□□□□ -1.93
PRKD3-210ENST00000494667 DMXL1Q9Y485 3027 aa2.99□□□□□ -1.93
PRKD3-210ENST00000494667 TPRP12270 2363 aaKnown RBP2.99□□□□□ -1.93
PRKD3-210ENST00000494667 A0A096LPF7 62 aa2.99□□□□□ -1.93
PRKD3-210ENST00000494667 WFDC13Q8IUB5 93 aa2.99□□□□□ -1.93
PRKD3-210ENST00000494667 DEFB105AQ8NG35 78 aa2.98□□□□□ -1.93
PRKD3-210ENST00000494667 RP1L1Q8IWN7 2480 aaPredicted RBP2.98□□□□□ -1.93
PRKD3-210ENST00000494667 SORL1Q92673 2214 aa2.98□□□□□ -1.93
PRKD3-210ENST00000494667 NBPF19A0A087WUL8 3843 aa2.98□□□□□ -1.93
PRKD3-210ENST00000494667 H0Y9J4 135 aa2.98□□□□□ -1.93
PRKD3-210ENST00000494667 KRTAP7-1Q8IUC3 87 aa2.98□□□□□ -1.93
PRKD3-210ENST00000494667 IGKV2-24A0A0C4DH68 120 aa2.97□□□□□ -1.93
PRKD3-210ENST00000494667 SPAG11AQ6PDA7 123 aa2.97□□□□□ -1.93
PRKD3-210ENST00000494667 WFDC10BQ8IUB3 73 aa2.97□□□□□ -1.93
PRKD3-210ENST00000494667 DNAH1Q9P2D7 4330 aa2.97□□□□□ -1.93
PRKD3-210ENST00000494667 ANKRD11Q6UB99 2663 aaPredicted RBP2.97□□□□□ -1.93
PRKD3-210ENST00000494667 OTOGLQ3ZCN5 2332 aa2.96□□□□□ -1.93
PRKD3-210ENST00000494667 NCOR1O75376 2440 aa2.96□□□□□ -1.94
PRKD3-210ENST00000494667 MAP1AP78559 2803 aaPredicted RBP2.96□□□□□ -1.94
PRKD3-210ENST00000494667 RELNP78509 3460 aa2.96□□□□□ -1.94
PRKD3-210ENST00000494667 ANK3Q12955 4377 aaKnown RBP2.96□□□□□ -1.94
PRKD3-210ENST00000494667 KRTAP13-3Q3SY46 172 aa2.96□□□□□ -1.94
PRKD3-210ENST00000494667 RETNLBQ9BQ08 111 aa2.96□□□□□ -1.94
PRKD3-210ENST00000494667 VPS13CQ709C8 3753 aa2.96□□□□□ -1.94
PRKD3-210ENST00000494667 A0A087WSZ3 146 aa2.95□□□□□ -1.94
PRKD3-210ENST00000494667 MDFIQ99750 246 aa2.95□□□□□ -1.94
PRKD3-210ENST00000494667 CHD6Q8TD26 2715 aa2.95□□□□□ -1.94
PRKD3-210ENST00000494667 CACNA1HO95180 2353 aa2.95□□□□□ -1.94
PRKD3-210ENST00000494667 LINC01556Q5JQF7 62 aa2.95□□□□□ -1.94
PRKD3-210ENST00000494667 REG3GQ6UW15 175 aa2.95□□□□□ -1.94
PRKD3-210ENST00000494667 RPL37AP61513 92 aaKnown RBP2.95□□□□□ -1.94
PRKD3-210ENST00000494667 PRAC1Q96KF2 57 aa2.95□□□□□ -1.94
PRKD3-210ENST00000494667 Q96NJ1 140 aa2.95□□□□□ -1.94
PRKD3-210ENST00000494667 CELSR2Q9HCU4 2923 aa2.94□□□□□ -1.94
PRKD3-210ENST00000494667 SPART-AS1P0CW21 52 aa2.94□□□□□ -1.94
PRKD3-210ENST00000494667 DNAJC9-AS1A6NH13 148 aa2.93□□□□□ -1.94
PRKD3-210ENST00000494667 DEFB116Q30KQ4 102 aa2.93□□□□□ -1.94
PRKD3-210ENST00000494667 DEFB123Q8N688 67 aa2.93□□□□□ -1.94
PRKD3-210ENST00000494667 PTPRZ1P23471 2315 aaPredicted RBP2.93□□□□□ -1.94
PRKD3-210ENST00000494667 DMAC1Q96GE9 116 aa2.93□□□□□ -1.94
PRKD3-210ENST00000494667 SVEP1Q4LDE5 3571 aa2.93□□□□□ -1.94
PRKD3-210ENST00000494667 PRB2P02812 416 aaPredicted RBP2.92□□□□□ -1.94
PRKD3-210ENST00000494667 NOTCH2NLQ7Z3S9 236 aa2.92□□□□□ -1.94
PRKD3-210ENST00000494667 ADM2Q7Z4H4 148 aa2.92□□□□□ -1.94
PRKD3-210ENST00000494667 ATMQ13315 3056 aa2.92□□□□□ -1.94
PRKD3-210ENST00000494667 C8orf17Q9NRJ1 99 aa2.92□□□□□ -1.94
PRKD3-210ENST00000494667 ACYP2P14621 99 aa2.92□□□□□ -1.94
PRKD3-210ENST00000494667 DNAH10OSP0CZ25 163 aa2.91□□□□□ -1.94
PRKD3-210ENST00000494667 FAM168BA1KXE4 195 aa2.9□□□□□ -1.94
PRKD3-210ENST00000494667 ASH1LQ9NR48 2969 aaKnown RBP2.9□□□□□ -1.95
PRKD3-210ENST00000494667 SPTAN1Q13813 2472 aaKnown RBP2.9□□□□□ -1.95
PRKD3-210ENST00000494667 ZNF861PO60384 105 aa2.9□□□□□ -1.95
PRKD3-210ENST00000494667 PCOTHQ58A44 107 aa2.89□□□□□ -1.95
PRKD3-210ENST00000494667 MRPL34Q9BQ48 92 aaKnown RBP2.89□□□□□ -1.95
PRKD3-210ENST00000494667 LAMA5O15230 3695 aa2.89□□□□□ -1.95
PRKD3-210ENST00000494667 SETXQ7Z333 2677 aaKnown RBP2.89□□□□□ -1.95
PRKD3-210ENST00000494667 A0A1B0GVX0 72 aa2.89□□□□□ -1.95
PRKD3-210ENST00000494667 UQCR11O14957 56 aa2.89□□□□□ -1.95
PRKD3-210ENST00000494667 MIR22HGQ0VDD5 57 aa2.89□□□□□ -1.95
PRKD3-210ENST00000494667 KRTAP1-3Q8IUG1 177 aa2.89□□□□□ -1.95
PRKD3-210ENST00000494667 AKAP6Q13023 2319 aa2.89□□□□□ -1.95
PRKD3-210ENST00000494667 ACACAQ13085 2346 aa2.89□□□□□ -1.95
PRKD3-210ENST00000494667 NOTCH3Q9UM47 2321 aa2.88□□□□□ -1.95
PRKD3-210ENST00000494667 COL12A1Q99715 3063 aa2.88□□□□□ -1.95
PRKD3-210ENST00000494667 ZNF292O60281 2723 aa2.88□□□□□ -1.95
PRKD3-210ENST00000494667 CSAG1Q6PB30 78 aa2.88□□□□□ -1.95
PRKD3-210ENST00000494667 KRTAP13-1Q8IUC0 172 aa2.88□□□□□ -1.95
PRKD3-210ENST00000494667 LINC00483Q53H64 154 aa2.87□□□□□ -1.95
PRKD3-210ENST00000494667 KMT2BQ9UMN6 2715 aaPredicted RBP2.87□□□□□ -1.95
PRKD3-210ENST00000494667 A0A1B0GU69 56 aa2.87□□□□□ -1.95
PRKD3-210ENST00000494667 DEFB135Q30KP9 77 aa2.87□□□□□ -1.95
PRKD3-210ENST00000494667 TLN1Q9Y490 2541 aaKnown RBP2.87□□□□□ -1.95
PRKD3-210ENST00000494667 A0A0G2JQZ4 141 aa2.87□□□□□ -1.95
PRKD3-210ENST00000494667 A0A1W2PNN7 141 aa2.87□□□□□ -1.95
PRKD3-210ENST00000494667 CRYBG3Q68DQ2 2970 aa2.87□□□□□ -1.95
PRKD3-210ENST00000494667 IGHV6-1A0A0B4J1U7 121 aa2.86□□□□□ -1.95
PRKD3-210ENST00000494667 ROMO1P60602 79 aa2.86□□□□□ -1.95
PRKD3-210ENST00000494667 DEFB113Q30KQ7 82 aa2.86□□□□□ -1.95
PRKD3-210ENST00000494667 TENM2Q9NT68 2774 aa2.85□□□□□ -1.95
PRKD3-210ENST00000494667 HIVEP3Q5T1R4 2406 aa2.85□□□□□ -1.95
PRKD3-210ENST00000494667 IGLV7-43P04211 117 aa2.85□□□□□ -1.95
PRKD3-210ENST00000494667 KRTAP25-1Q3LHN0 102 aa2.85□□□□□ -1.95
PRKD3-210ENST00000494667 NCOR2Q9Y618 2525 aa2.85□□□□□ -1.95
PRKD3-210ENST00000494667 CHTF8P0CG12 524 aa2.84□□□□□ -1.95
PRKD3-210ENST00000494667 BDP1A6H8Y1 2624 aa2.84□□□□□ -1.96
PRKD3-210ENST00000494667 A8MUU9 505 aa2.84□□□□□ -1.96
PRKD3-210ENST00000494667 INAFM1C9JVW0 142 aa2.84□□□□□ -1.96
PRKD3-210ENST00000494667 DEFB4AO15263 64 aa2.84□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 288.3 ms