RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 NPC2P61916 151 aa1.61□□□□□ -2.15
CDC42EP3-205ENST00000494083 Q8N377 158 aa1.61□□□□□ -2.15
CDC42EP3-205ENST00000494083 C11orf68Q9H3H3 251 aaKnown RBP1.61□□□□□ -2.15
CDC42EP3-205ENST00000494083 CDKN2A-AS1Q9UH64 79 aa1.61□□□□□ -2.15
CDC42EP3-205ENST00000494083 UTP20O75691 2785 aaKnown RBP1.6□□□□□ -2.15
CDC42EP3-205ENST00000494083 PKDREJQ9NTG1 2253 aa1.6□□□□□ -2.15
CDC42EP3-205ENST00000494083 MXRA5Q9NR99 2828 aa1.6□□□□□ -2.15
CDC42EP3-205ENST00000494083 IGHV3-49A0A0A0MS15 119 aa1.6□□□□□ -2.15
CDC42EP3-205ENST00000494083 CASC10Q5T4H9 136 aa1.6□□□□□ -2.15
CDC42EP3-205ENST00000494083 LCE3AQ5TA76 89 aa1.6□□□□□ -2.15
CDC42EP3-205ENST00000494083 GCN1Q92616 2671 aaKnown RBP1.6□□□□□ -2.15
CDC42EP3-205ENST00000494083 RYR1P21817 5038 aa1.6□□□□□ -2.15
CDC42EP3-205ENST00000494083 TRAV13-1A0A0B4J241 112 aa1.6□□□□□ -2.15
CDC42EP3-205ENST00000494083 ELOF1P60002 83 aaKnown RBP1.6□□□□□ -2.15
CDC42EP3-205ENST00000494083 SPANXA2-OT1Q8N9U9 137 aa1.6□□□□□ -2.15
CDC42EP3-205ENST00000494083 NDUFA12Q9UI09 145 aa1.6□□□□□ -2.15
CDC42EP3-205ENST00000494083 MOB4Q9Y3A3 225 aa1.6□□□□□ -2.15
CDC42EP3-205ENST00000494083 CCL18P55774 89 aa1.6□□□□□ -2.15
CDC42EP3-205ENST00000494083 LRP1Q07954 4544 aaKnown RBP1.59□□□□□ -2.15
CDC42EP3-205ENST00000494083 POLEQ07864 2286 aa1.59□□□□□ -2.15
CDC42EP3-205ENST00000494083 CACNA1BQ00975 2339 aa1.59□□□□□ -2.15
CDC42EP3-205ENST00000494083 UBE2L6O14933 153 aa1.59□□□□□ -2.15
CDC42EP3-205ENST00000494083 TLX1NBP0CAT3 122 aa1.59□□□□□ -2.15
CDC42EP3-205ENST00000494083 FAM74A4Q5TZK3 123 aa1.59□□□□□ -2.15
CDC42EP3-205ENST00000494083 KTN1-AS1Q86SY8 53 aa1.59□□□□□ -2.15
CDC42EP3-205ENST00000494083 KCNQ1DNQ9H478 68 aa1.59□□□□□ -2.15
CDC42EP3-205ENST00000494083 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.59□□□□□ -2.16
CDC42EP3-205ENST00000494083 DNAL4O96015 105 aa1.59□□□□□ -2.16
CDC42EP3-205ENST00000494083 BAALC-AS2P0C853 105 aa1.59□□□□□ -2.16
CDC42EP3-205ENST00000494083 Q8NBF4 154 aa1.59□□□□□ -2.16
CDC42EP3-205ENST00000494083 ABCA4P78363 2273 aa1.59□□□□□ -2.16
CDC42EP3-205ENST00000494083 A0A087WVE0 104 aa1.58□□□□□ -2.16
CDC42EP3-205ENST00000494083 IGKV3D-7A0A0C4DH55 119 aa1.58□□□□□ -2.16
CDC42EP3-205ENST00000494083 CHTF8P0CG12 524 aa1.58□□□□□ -2.16
CDC42EP3-205ENST00000494083 COPS9Q8WXC6 57 aa1.58□□□□□ -2.16
CDC42EP3-205ENST00000494083 TRAV10A0A0B4J240 114 aa1.58□□□□□ -2.16
CDC42EP3-205ENST00000494083 JMJD7-PLA2G4BH0Y9G9 81 aa1.58□□□□□ -2.16
CDC42EP3-205ENST00000494083 CD28P10747 220 aa1.58□□□□□ -2.16
CDC42EP3-205ENST00000494083 DEFB1P60022 68 aa1.58□□□□□ -2.16
CDC42EP3-205ENST00000494083 EGFEM1PQ0D2K5 195 aa1.58□□□□□ -2.16
CDC42EP3-205ENST00000494083 RMI2Q96E14 147 aa1.58□□□□□ -2.16
CDC42EP3-205ENST00000494083 MAP1AP78559 2803 aaPredicted RBP1.58□□□□□ -2.16
CDC42EP3-205ENST00000494083 SPRR1BP22528 89 aa1.58□□□□□ -2.16
CDC42EP3-205ENST00000494083 RNASE13Q5GAN3 156 aaKnown RBP1.58□□□□□ -2.16
CDC42EP3-205ENST00000494083 MIR7-3HGQ8N6C7 128 aa1.58□□□□□ -2.16
CDC42EP3-205ENST00000494083 Q96NJ1 140 aa1.58□□□□□ -2.16
CDC42EP3-205ENST00000494083 DHRS4-AS1Q9P1J3 65 aa1.58□□□□□ -2.16
CDC42EP3-205ENST00000494083 SETXQ7Z333 2677 aaKnown RBP1.58□□□□□ -2.16
CDC42EP3-205ENST00000494083 CACNA1HO95180 2353 aa1.58□□□□□ -2.16
CDC42EP3-205ENST00000494083 MUC6Q6W4X9 2439 aa1.58□□□□□ -2.16
CDC42EP3-205ENST00000494083 CNOT1A5YKK6 2376 aaKnown RBP1.57□□□□□ -2.16
CDC42EP3-205ENST00000494083 REG3AQ06141 175 aa1.57□□□□□ -2.16
CDC42EP3-205ENST00000494083 CIRBPQ14011 172 aaKnown RBP1.57□□□□□ -2.16
CDC42EP3-205ENST00000494083 Q5VV11 94 aa1.57□□□□□ -2.16
CDC42EP3-205ENST00000494083 Q6ZR54 194 aa1.57□□□□□ -2.16
CDC42EP3-205ENST00000494083 KRTAP13-1Q8IUC0 172 aa1.57□□□□□ -2.16
CDC42EP3-205ENST00000494083 KRTAP4-3Q9BYR4 195 aa1.57□□□□□ -2.16
CDC42EP3-205ENST00000494083 MUC17Q685J3 4493 aa1.57□□□□□ -2.16
CDC42EP3-205ENST00000494083 IGKV3-7A0A075B6H7 116 aa1.57□□□□□ -2.16
CDC42EP3-205ENST00000494083 A8MUN3 132 aa1.57□□□□□ -2.16
CDC42EP3-205ENST00000494083 SPTBN1Q01082 2364 aaKnown RBP1.57□□□□□ -2.16
CDC42EP3-205ENST00000494083 GPR179Q6PRD1 2367 aa1.57□□□□□ -2.16
CDC42EP3-205ENST00000494083 C4orf3Q8WVX3 66 aa1.57□□□□□ -2.16
CDC42EP3-205ENST00000494083 C14orf132Q9NPU4 83 aa1.57□□□□□ -2.16
CDC42EP3-205ENST00000494083 PCNX1Q96RV3 2341 aa1.57□□□□□ -2.16
CDC42EP3-205ENST00000494083 LYNX1G3V0Z9 82 aa1.57□□□□□ -2.16
CDC42EP3-205ENST00000494083 LYNX1P0DP58 116 aa1.57□□□□□ -2.16
CDC42EP3-205ENST00000494083 LINC00313P59037 77 aa1.57□□□□□ -2.16
CDC42EP3-205ENST00000494083 Q6ZTI0 123 aa1.57□□□□□ -2.16
CDC42EP3-205ENST00000494083 LCA10Q71F78 164 aa1.57□□□□□ -2.16
CDC42EP3-205ENST00000494083 CAMK2N1Q7Z7J9 78 aa1.57□□□□□ -2.16
CDC42EP3-205ENST00000494083 C20orf197Q8N268 126 aa1.57□□□□□ -2.16
CDC42EP3-205ENST00000494083 OTOGLQ3ZCN5 2332 aa1.57□□□□□ -2.16
CDC42EP3-205ENST00000494083 G3V318 75 aa1.56□□□□□ -2.16
CDC42EP3-205ENST00000494083 KRTAP10-8P60410 259 aa1.56□□□□□ -2.16
CDC42EP3-205ENST00000494083 SCXQ7RTU7 201 aa1.56□□□□□ -2.16
CDC42EP3-205ENST00000494083 WFDC11Q8NEX6 87 aa1.56□□□□□ -2.16
CDC42EP3-205ENST00000494083 CAMK2N2Q96S95 79 aa1.56□□□□□ -2.16
CDC42EP3-205ENST00000494083 ZDBF2Q9HCK1 2354 aa1.56□□□□□ -2.16
CDC42EP3-205ENST00000494083 MEGF8Q7Z7M0 2845 aa1.56□□□□□ -2.16
CDC42EP3-205ENST00000494083 IGLV1-50A0A075B6I6 118 aa1.56□□□□□ -2.16
CDC42EP3-205ENST00000494083 TRAV23DV6A0A075B6W5 121 aa1.56□□□□□ -2.16
CDC42EP3-205ENST00000494083 COX7B2Q8TF08 81 aa1.56□□□□□ -2.16
CDC42EP3-205ENST00000494083 ZNF706Q9Y5V0 76 aaPredicted RBP1.56□□□□□ -2.16
CDC42EP3-205ENST00000494083 TMEM256-PLSCR3K7ERE1 68 aa1.56□□□□□ -2.16
CDC42EP3-205ENST00000494083 DNAH10OSP0CZ25 163 aa1.56□□□□□ -2.16
CDC42EP3-205ENST00000494083 ORMDL1Q9P0S3 153 aa1.56□□□□□ -2.16
CDC42EP3-205ENST00000494083 KIAA1109Q2LD37 5005 aa1.56□□□□□ -2.16
CDC42EP3-205ENST00000494083 MED13LQ71F56 2210 aa1.56□□□□□ -2.16
CDC42EP3-205ENST00000494083 LRP1BQ9NZR2 4599 aa1.55□□□□□ -2.16
CDC42EP3-205ENST00000494083 EPG5Q9HCE0 2579 aa1.55□□□□□ -2.16
CDC42EP3-205ENST00000494083 IGLV4-60A0A075B6I1 120 aa1.55□□□□□ -2.16
CDC42EP3-205ENST00000494083 BLCAPP62952 87 aa1.55□□□□□ -2.16
CDC42EP3-205ENST00000494083 C7orf33Q8WU49 177 aa1.55□□□□□ -2.16
CDC42EP3-205ENST00000494083 BRK1Q8WUW1 75 aa1.55□□□□□ -2.16
CDC42EP3-205ENST00000494083 DOPEY2Q9Y3R5 2298 aa1.55□□□□□ -2.16
CDC42EP3-205ENST00000494083 FAM208BQ5VWN6 2430 aa1.55□□□□□ -2.16
CDC42EP3-205ENST00000494083 IGHV3-73A0A0B4J1V6 119 aa1.55□□□□□ -2.16
CDC42EP3-205ENST00000494083 H3BNG1 76 aa1.55□□□□□ -2.16
CDC42EP3-205ENST00000494083 PSCAO43653 123 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms