RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 KRTAP3-2Q9BYR7 98 aa6.29□□□□□ -1.4
NPHP3-209ENST00000493732 LOC107984640A0A0U1RRK4 108 aa6.29□□□□□ -1.4
NPHP3-209ENST00000493732 A0A1B0GW54 56 aa6.29□□□□□ -1.4
NPHP3-209ENST00000493732 Q6ZVQ6 151 aa6.29□□□□□ -1.4
NPHP3-209ENST00000493732 A0A087WVE0 104 aa6.28□□□□□ -1.4
NPHP3-209ENST00000493732 LINC01547P58512 204 aaPredicted RBP6.27□□□□□ -1.41
NPHP3-209ENST00000493732 SERTAD4-AS1Q5TG53 156 aa6.27□□□□□ -1.41
NPHP3-209ENST00000493732 STAB1Q9NY15 2570 aa6.27□□□□□ -1.41
NPHP3-209ENST00000493732 IGLV1-50A0A075B6I6 118 aa6.27□□□□□ -1.41
NPHP3-209ENST00000493732 ETDCA0A1B0GVM5 59 aa6.27□□□□□ -1.41
NPHP3-209ENST00000493732 HAMPP81172 84 aa6.27□□□□□ -1.41
NPHP3-209ENST00000493732 Q6ZRX8 168 aa6.27□□□□□ -1.41
NPHP3-209ENST00000493732 SPRR1AP35321 89 aa6.26□□□□□ -1.41
NPHP3-209ENST00000493732 PRB2P02812 416 aaPredicted RBP6.25□□□□□ -1.41
NPHP3-209ENST00000493732 MAST4O15021 2626 aa6.25□□□□□ -1.41
NPHP3-209ENST00000493732 FLNBO75369 2602 aaKnown RBP6.25□□□□□ -1.41
NPHP3-209ENST00000493732 C14orf177Q52M58 125 aa6.25□□□□□ -1.41
NPHP3-209ENST00000493732 FAM19A1Q7Z5A9 133 aa6.25□□□□□ -1.41
NPHP3-209ENST00000493732 MRPL55Q7Z7F7 128 aaKnown RBP6.25□□□□□ -1.41
NPHP3-209ENST00000493732 PKIGQ9Y2B9 76 aa6.25□□□□□ -1.41
NPHP3-209ENST00000493732 IGLV5-48A0A075B6I7 105 aa6.24□□□□□ -1.41
NPHP3-209ENST00000493732 TENM3Q9P273 2699 aa6.24□□□□□ -1.41
NPHP3-209ENST00000493732 FBN1P35555 2871 aaKnown RBP6.24□□□□□ -1.41
NPHP3-209ENST00000493732 KRTAP4-16G5E9R7 235 aaPredicted RBP6.23□□□□□ -1.41
NPHP3-209ENST00000493732 SEC61GP60059 68 aa6.23□□□□□ -1.41
NPHP3-209ENST00000493732 M0R2N4 97 aa6.23□□□□□ -1.41
NPHP3-209ENST00000493732 DNAH3Q8TD57 4116 aa6.22□□□□□ -1.41
NPHP3-209ENST00000493732 PKD1L1Q8TDX9 2849 aa6.22□□□□□ -1.41
NPHP3-209ENST00000493732 FUSP35637 526 aaKnown RBP eCLIP6.22□□□□□ -1.41
NPHP3-209ENST00000493732 CNBPP62633 177 aaKnown RBP6.22□□□□□ -1.41
NPHP3-209ENST00000493732 CASC10Q5T4H9 136 aa6.22□□□□□ -1.41
NPHP3-209ENST00000493732 Q8N377 158 aa6.22□□□□□ -1.41
NPHP3-209ENST00000493732 RPL37AP8A6NKH3 93 aa6.21□□□□□ -1.41
NPHP3-209ENST00000493732 PSCAO43653 123 aa6.21□□□□□ -1.41
NPHP3-209ENST00000493732 UBE2DNLQ8IWF7 75 aa6.21□□□□□ -1.41
NPHP3-209ENST00000493732 TRAV7A0A075B6U4 112 aa6.21□□□□□ -1.42
NPHP3-209ENST00000493732 C16orf90A8MZG2 172 aa6.21□□□□□ -1.42
NPHP3-209ENST00000493732 TMEM258P61165 79 aa6.21□□□□□ -1.42
NPHP3-209ENST00000493732 NREPQ16612 68 aa6.21□□□□□ -1.42
NPHP3-209ENST00000493732 REG3GQ6UW15 175 aa6.21□□□□□ -1.42
NPHP3-209ENST00000493732 DEFB105AQ8NG35 78 aa6.21□□□□□ -1.42
NPHP3-209ENST00000493732 BAHCC1Q9P281 2608 aa6.2□□□□□ -1.42
NPHP3-209ENST00000493732 CMYA5Q8N3K9 4069 aa6.19□□□□□ -1.42
NPHP3-209ENST00000493732 FAM168BA1KXE4 195 aa6.19□□□□□ -1.42
NPHP3-209ENST00000493732 FAM19A5Q7Z5A7 132 aaPredicted RBP6.19□□□□□ -1.42
NPHP3-209ENST00000493732 Q9BRP9 147 aa6.19□□□□□ -1.42
NPHP3-209ENST00000493732 B9D2Q9BPU9 175 aa6.19□□□□□ -1.42
NPHP3-209ENST00000493732 APLNQ9ULZ1 77 aa6.19□□□□□ -1.42
NPHP3-209ENST00000493732 NOTCH1P46531 2555 aa6.18□□□□□ -1.42
NPHP3-209ENST00000493732 UBE2BP63146 152 aa6.18□□□□□ -1.42
NPHP3-209ENST00000493732 COL6A5A8TX70 2615 aa6.17□□□□□ -1.42
NPHP3-209ENST00000493732 KRTAP7-1Q8IUC3 87 aa6.17□□□□□ -1.42
NPHP3-209ENST00000493732 ANK2Q01484 3957 aa6.17□□□□□ -1.42
NPHP3-209ENST00000493732 RPS28P62857 69 aaKnown RBP6.17□□□□□ -1.42
NPHP3-209ENST00000493732 C1orf137Q5JT78 98 aa6.17□□□□□ -1.42
NPHP3-209ENST00000493732 F8WEM9 126 aa6.16□□□□□ -1.42
NPHP3-209ENST00000493732 BPY2O14599 106 aa6.16□□□□□ -1.42
NPHP3-209ENST00000493732 TNP2Q05952 138 aa6.16□□□□□ -1.42
NPHP3-209ENST00000493732 NUPR2A6NF83 97 aa6.15□□□□□ -1.42
NPHP3-209ENST00000493732 Q8NBF4 154 aa6.15□□□□□ -1.42
NPHP3-209ENST00000493732 J3KT08 172 aa6.15□□□□□ -1.43
NPHP3-209ENST00000493732 LINC00474Q9P2X8 69 aa6.15□□□□□ -1.43
NPHP3-209ENST00000493732 HUWE1Q7Z6Z7 4374 aaKnown RBP6.14□□□□□ -1.43
NPHP3-209ENST00000493732 A0A096LNI7 61 aa6.14□□□□□ -1.43
NPHP3-209ENST00000493732 SPRR4Q96PI1 79 aa6.14□□□□□ -1.43
NPHP3-209ENST00000493732 KRTAP1-5Q9BYS1 174 aa6.14□□□□□ -1.43
NPHP3-209ENST00000493732 NBEAL1Q6ZS30 2694 aa6.13□□□□□ -1.43
NPHP3-209ENST00000493732 H0Y9J4 135 aa6.13□□□□□ -1.43
NPHP3-209ENST00000493732 C3orf84H3BNL1 204 aa6.13□□□□□ -1.43
NPHP3-209ENST00000493732 SCXQ7RTU7 201 aa6.13□□□□□ -1.43
NPHP3-209ENST00000493732 C20orf197Q8N268 126 aa6.13□□□□□ -1.43
NPHP3-209ENST00000493732 ST20-AS1Q8NBB2 130 aa6.13□□□□□ -1.43
NPHP3-209ENST00000493732 IGKV2-24A0A0C4DH68 120 aa6.12□□□□□ -1.43
NPHP3-209ENST00000493732 A0A1W2PNM2 257 aa6.12□□□□□ -1.43
NPHP3-209ENST00000493732 NDUFC1O43677 76 aa6.12□□□□□ -1.43
NPHP3-209ENST00000493732 ERC2-IT1O76042 136 aa6.12□□□□□ -1.43
NPHP3-209ENST00000493732 KLKP1Q107X0 134 aa6.12□□□□□ -1.43
NPHP3-209ENST00000493732 C9orf163Q8N9P6 203 aa6.11□□□□□ -1.43
NPHP3-209ENST00000493732 DNAH1Q9P2D7 4330 aa6.11□□□□□ -1.43
NPHP3-209ENST00000493732 NBDYA0A0U1RRE5 68 aa6.11□□□□□ -1.43
NPHP3-209ENST00000493732 IGKV4-1P06312 121 aa6.11□□□□□ -1.43
NPHP3-209ENST00000493732 IGLV8-61A0A075B6I0 122 aa6.1□□□□□ -1.43
NPHP3-209ENST00000493732 A0A1W2PNN7 141 aa6.1□□□□□ -1.43
NPHP3-209ENST00000493732 V9GYY9 64 aa6.1□□□□□ -1.43
NPHP3-209ENST00000493732 SMIM29Q86T20 159 aa6.09□□□□□ -1.44
NPHP3-209ENST00000493732 DPH3Q96FX2 82 aa6.09□□□□□ -1.44
NPHP3-209ENST00000493732 CYSTM1Q9H1C7 97 aa6.09□□□□□ -1.44
NPHP3-209ENST00000493732 MGAM2Q2M2H8 2515 aa6.08□□□□□ -1.44
NPHP3-209ENST00000493732 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.08□□□□□ -1.44
NPHP3-209ENST00000493732 LINC00476Q8WZB0 136 aa6.08□□□□□ -1.44
NPHP3-209ENST00000493732 LRCOL1A6NCL2 159 aa6.07□□□□□ -1.44
NPHP3-209ENST00000493732 MDFIQ99750 246 aa6.07□□□□□ -1.44
NPHP3-209ENST00000493732 HIGD2AQ9BW72 106 aa6.07□□□□□ -1.44
NPHP3-209ENST00000493732 SPRR1BP22528 89 aa6.07□□□□□ -1.44
NPHP3-209ENST00000493732 PRO0628Q9UI54 55 aa6.07□□□□□ -1.44
NPHP3-209ENST00000493732 UBE2AP49459 152 aa6.06□□□□□ -1.44
NPHP3-209ENST00000493732 PRLHP81277 87 aa6.06□□□□□ -1.44
NPHP3-209ENST00000493732 FAM236DA0A1B0GTK5 79 aa6.05□□□□□ -1.44
NPHP3-209ENST00000493732 FAM236CP0DP71 79 aa6.05□□□□□ -1.44
NPHP3-209ENST00000493732 ATP5EP56381 51 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms