RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 IGLV6-57P01721 117 aa7.76□□□□□ -1.17
SNX17-208ENST00000493711 OR13C6PQ8NH95 151 aa7.76□□□□□ -1.17
SNX17-208ENST00000493711 IGKV2-28A0A075B6P5 120 aa7.75□□□□□ -1.17
SNX17-208ENST00000493711 IGKV2D-28P01615 120 aa7.75□□□□□ -1.17
SNX17-208ENST00000493711 HAMPP81172 84 aa7.75□□□□□ -1.17
SNX17-208ENST00000493711 A0A0B4J2C4 111 aa7.74□□□□□ -1.17
SNX17-208ENST00000493711 TRBV10-3A0A0K0K1G6 114 aa7.74□□□□□ -1.17
SNX17-208ENST00000493711 A6NDN8 102 aa7.74□□□□□ -1.17
SNX17-208ENST00000493711 RPL37AP8A6NKH3 93 aa7.74□□□□□ -1.17
SNX17-208ENST00000493711 KRTAP9-7A8MTY7 169 aa7.74□□□□□ -1.17
SNX17-208ENST00000493711 PRYO14603 147 aa7.74□□□□□ -1.17
SNX17-208ENST00000493711 CTAG1AP78358 180 aa7.74□□□□□ -1.17
SNX17-208ENST00000493711 RAB37Q96AX2 223 aa7.74□□□□□ -1.17
SNX17-208ENST00000493711 KCNQ1DNQ9H478 68 aa7.74□□□□□ -1.17
SNX17-208ENST00000493711 LINC00337Q8N6G1 96 aa7.73□□□□□ -1.17
SNX17-208ENST00000493711 DNAH5Q8TE73 4624 aa7.73□□□□□ -1.17
SNX17-208ENST00000493711 PLA2G1BP04054 148 aaKnown RBP7.72□□□□□ -1.17
SNX17-208ENST00000493711 FXYD2P54710 66 aa7.72□□□□□ -1.17
SNX17-208ENST00000493711 REG3GQ6UW15 175 aa7.72□□□□□ -1.17
SNX17-208ENST00000493711 TRAV23DV6A0A075B6W5 121 aa7.71□□□□□ -1.18
SNX17-208ENST00000493711 CFC1BP0CG36 223 aa7.71□□□□□ -1.18
SNX17-208ENST00000493711 CFC1P0CG37 223 aa7.71□□□□□ -1.18
SNX17-208ENST00000493711 HINT1P49773 126 aaPredicted RBP7.71□□□□□ -1.18
SNX17-208ENST00000493711 RPL37AP61513 92 aaKnown RBP7.71□□□□□ -1.18
SNX17-208ENST00000493711 BVES-AS1Q5T3Y7 98 aa7.71□□□□□ -1.18
SNX17-208ENST00000493711 PSORS1C2Q9UIG4 136 aa7.71□□□□□ -1.18
SNX17-208ENST00000493711 A0A1B0GWB2 263 aa7.7□□□□□ -1.18
SNX17-208ENST00000493711 BCE1O60756 84 aa7.7□□□□□ -1.18
SNX17-208ENST00000493711 SMR3BP02814 79 aaPredicted RBP7.7□□□□□ -1.18
SNX17-208ENST00000493711 KRTAP19-4Q3LI73 84 aa7.7□□□□□ -1.18
SNX17-208ENST00000493711 PRO1854Q9UHT4 67 aa7.7□□□□□ -1.18
SNX17-208ENST00000493711 LRP1BQ9NZR2 4599 aa7.7□□□□□ -1.18
SNX17-208ENST00000493711 ZNF73O43830 326 aaPredicted RBP7.69□□□□□ -1.18
SNX17-208ENST00000493711 RPL13AP40429 203 aaKnown RBP7.69□□□□□ -1.18
SNX17-208ENST00000493711 C1orf137Q5JT78 98 aa7.69□□□□□ -1.18
SNX17-208ENST00000493711 Q8N1X5 172 aa7.69□□□□□ -1.18
SNX17-208ENST00000493711 NHP2Q9NX24 153 aaKnown RBP7.69□□□□□ -1.18
SNX17-208ENST00000493711 TRBV7-6A0A0J9YX20 115 aa7.68□□□□□ -1.18
SNX17-208ENST00000493711 ETDCA0A1B0GVM5 59 aa7.68□□□□□ -1.18
SNX17-208ENST00000493711 SPRR1AP35321 89 aa7.68□□□□□ -1.18
SNX17-208ENST00000493711 DIRC1Q969H9 104 aa7.68□□□□□ -1.18
SNX17-208ENST00000493711 DNAH8Q96JB1 4490 aa7.67□□□□□ -1.18
SNX17-208ENST00000493711 H0Y9J4 135 aa7.67□□□□□ -1.18
SNX17-208ENST00000493711 RPL28P46779 137 aaKnown RBP7.67□□□□□ -1.18
SNX17-208ENST00000493711 VAMP3Q15836 100 aa7.67□□□□□ -1.18
SNX17-208ENST00000493711 KRTAP11-1Q8IUC1 163 aa7.67□□□□□ -1.18
SNX17-208ENST00000493711 IGLV7-43P04211 117 aa7.66□□□□□ -1.18
SNX17-208ENST00000493711 UBE2AP49459 152 aa7.66□□□□□ -1.18
SNX17-208ENST00000493711 Q5VSD8 79 aa7.65□□□□□ -1.18
SNX17-208ENST00000493711 FAM19A1Q7Z5A9 133 aa7.65□□□□□ -1.18
SNX17-208ENST00000493711 SMIM11BQ8TCY0 68 aa7.65□□□□□ -1.18
SNX17-208ENST00000493711 KRTAP4-9Q9BYQ8 210 aa7.65□□□□□ -1.18
SNX17-208ENST00000493711 KRTAP4-16G5E9R7 235 aaPredicted RBP7.64□□□□□ -1.19
SNX17-208ENST00000493711 Q1RN00 199 aa7.64□□□□□ -1.19
SNX17-208ENST00000493711 C6orf99Q4VX62 202 aa7.64□□□□□ -1.19
SNX17-208ENST00000493711 APOBP04114 4563 aaKnown RBP7.64□□□□□ -1.19
SNX17-208ENST00000493711 H7C2G1 150 aa7.63□□□□□ -1.19
SNX17-208ENST00000493711 ZNF861PO60384 105 aa7.63□□□□□ -1.19
SNX17-208ENST00000493711 COX7BP24311 80 aa7.63□□□□□ -1.19
SNX17-208ENST00000493711 BATFQ16520 125 aa7.63□□□□□ -1.19
SNX17-208ENST00000493711 UBR4Q5T4S7 5183 aa7.62□□□□□ -1.19
SNX17-208ENST00000493711 PCP4L1A6NKN8 68 aa7.62□□□□□ -1.19
SNX17-208ENST00000493711 B5MCH6 92 aa7.62□□□□□ -1.19
SNX17-208ENST00000493711 K7ERJ3 54 aa7.62□□□□□ -1.19
SNX17-208ENST00000493711 INAFM2P0DMQ5 153 aa7.62□□□□□ -1.19
SNX17-208ENST00000493711 ELOF1P60002 83 aaKnown RBP7.62□□□□□ -1.19
SNX17-208ENST00000493711 Q6ZRX8 168 aa7.62□□□□□ -1.19
SNX17-208ENST00000493711 DHRS4-AS1Q9P1J3 65 aa7.62□□□□□ -1.19
SNX17-208ENST00000493711 H0YGX0 51 aa7.61□□□□□ -1.19
SNX17-208ENST00000493711 SNCGO76070 127 aa7.61□□□□□ -1.19
SNX17-208ENST00000493711 COX6CP09669 75 aa7.61□□□□□ -1.19
SNX17-208ENST00000493711 SPINK6Q6UWN8 80 aa7.61□□□□□ -1.19
SNX17-208ENST00000493711 KRTAP13-1Q8IUC0 172 aa7.61□□□□□ -1.19
SNX17-208ENST00000493711 KRTAP10-4P60372 401 aaPredicted RBP7.6□□□□□ -1.19
SNX17-208ENST00000493711 SLC25A20O43772 301 aa7.59□□□□□ -1.19
SNX17-208ENST00000493711 PSMB2P49721 201 aa7.59□□□□□ -1.19
SNX17-208ENST00000493711 DMBT1Q9UGM3 2413 aaPredicted RBP7.58□□□□□ -1.2
SNX17-208ENST00000493711 TSPAN13O95857 204 aa7.58□□□□□ -1.2
SNX17-208ENST00000493711 PRLHP81277 87 aa7.58□□□□□ -1.2
SNX17-208ENST00000493711 COL5A1-AS1Q5SY13 56 aa7.57□□□□□ -1.2
SNX17-208ENST00000493711 HIGD2AQ9BW72 106 aa7.57□□□□□ -1.2
SNX17-208ENST00000493711 SNHG12Q9BXW3 62 aa7.57□□□□□ -1.2
SNX17-208ENST00000493711 ZNF706Q9Y5V0 76 aaPredicted RBP7.57□□□□□ -1.2
SNX17-208ENST00000493711 TRIAP1O43715 76 aa7.56□□□□□ -1.2
SNX17-208ENST00000493711 LYRM7Q5U5X0 104 aa7.56□□□□□ -1.2
SNX17-208ENST00000493711 A0A1B0GX51 115 aa7.55□□□□□ -1.2
SNX17-208ENST00000493711 LINC00575Q6W349 94 aa7.55□□□□□ -1.2
SNX17-208ENST00000493711 SMCR5Q8TEV8 140 aa7.55□□□□□ -1.2
SNX17-208ENST00000493711 SCGB1C2P0DMR2 95 aa7.54□□□□□ -1.2
SNX17-208ENST00000493711 Q9BRP9 147 aa7.54□□□□□ -1.2
SNX17-208ENST00000493711 hADV29S1A0JD25 119 aa7.53□□□□□ -1.2
SNX17-208ENST00000493711 C9orf118A6NHY6 69 aa7.52□□□□□ -1.21
SNX17-208ENST00000493711 MYCBP2O75592 4640 aa7.52□□□□□ -1.21
SNX17-208ENST00000493711 TAX1BP3O14907 124 aa7.51□□□□□ -1.21
SNX17-208ENST00000493711 OCIAD2Q56VL3 154 aa7.5□□□□□ -1.21
SNX17-208ENST00000493711 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.5□□□□□ -1.21
SNX17-208ENST00000493711 SRRM2Q9UQ35 2752 aaKnown RBP7.49□□□□□ -1.21
SNX17-208ENST00000493711 TRBV20-1A0A075B6N2 111 aa7.49□□□□□ -1.21
SNX17-208ENST00000493711 H3BQ85 93 aa7.49□□□□□ -1.21
SNX17-208ENST00000493711 H3BUT2 72 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms