RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 PRDM15P57071 1507 aaPredicted RBP-0.19□□□□□ -2.44
HMGB1P30-201ENST00000492455 UTP20O75691 2785 aaKnown RBP-0.19□□□□□ -2.44
HMGB1P30-201ENST00000492455 AKAP13Q12802 2813 aa-0.19□□□□□ -2.44
HMGB1P30-201ENST00000492455 SAMD9Q5K651 1589 aa-0.19□□□□□ -2.44
HMGB1P30-201ENST00000492455 PLIN4Q96Q06 1357 aa-0.19□□□□□ -2.44
HMGB1P30-201ENST00000492455 HTTP42858 3142 aa-0.2□□□□□ -2.44
HMGB1P30-201ENST00000492455 PDCD11Q14690 1871 aaKnown RBP-0.2□□□□□ -2.44
HMGB1P30-201ENST00000492455 SCN7AQ01118 1682 aa-0.2□□□□□ -2.44
HMGB1P30-201ENST00000492455 MAGI2Q86UL8 1455 aa-0.2□□□□□ -2.44
HMGB1P30-201ENST00000492455 KNDC1Q76NI1 1749 aa-0.2□□□□□ -2.44
HMGB1P30-201ENST00000492455 TRAV21A0A0B4J279 112 aa-0.2□□□□□ -2.44
HMGB1P30-201ENST00000492455 MYMXA0A1B0GTQ4 84 aa-0.2□□□□□ -2.44
HMGB1P30-201ENST00000492455 PVALEFA0A1B0GWK0 134 aa-0.2□□□□□ -2.44
HMGB1P30-201ENST00000492455 SPRR2EP22531 72 aa-0.2□□□□□ -2.44
HMGB1P30-201ENST00000492455 S100A16Q96FQ6 103 aaKnown RBP-0.2□□□□□ -2.44
HMGB1P30-201ENST00000492455 V9GYS6 101 aa-0.2□□□□□ -2.44
HMGB1P30-201ENST00000492455 PAPPA2Q9BXP8 1791 aa-0.2□□□□□ -2.44
HMGB1P30-201ENST00000492455 UBR3Q6ZT12 1888 aa-0.2□□□□□ -2.44
HMGB1P30-201ENST00000492455 KIAA1551Q9HCM1 1747 aa-0.21□□□□□ -2.44
HMGB1P30-201ENST00000492455 ATP10BO94823 1461 aa-0.21□□□□□ -2.44
HMGB1P30-201ENST00000492455 COL14A1Q05707 1796 aaKnown RBP-0.21□□□□□ -2.44
HMGB1P30-201ENST00000492455 EPRSP07814 1512 aaKnown RBP-0.21□□□□□ -2.44
HMGB1P30-201ENST00000492455 FAT1Q14517 4588 aa-0.21□□□□□ -2.44
HMGB1P30-201ENST00000492455 UMAD1C9J7I0 102 aa-0.21□□□□□ -2.44
HMGB1P30-201ENST00000492455 KRTAP20-1Q3LI63 56 aa-0.21□□□□□ -2.44
HMGB1P30-201ENST00000492455 LINC00643Q86TS7 51 aa-0.21□□□□□ -2.44
HMGB1P30-201ENST00000492455 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.21□□□□□ -2.44
HMGB1P30-201ENST00000492455 LAMA5O15230 3695 aa-0.21□□□□□ -2.44
HMGB1P30-201ENST00000492455 FASNP49327 2511 aaKnown RBP-0.21□□□□□ -2.44
HMGB1P30-201ENST00000492455 STARD9Q9P2P6 4700 aa-0.21□□□□□ -2.44
HMGB1P30-201ENST00000492455 ITPR3Q14573 2671 aa-0.21□□□□□ -2.44
HMGB1P30-201ENST00000492455 NCOA3Q9Y6Q9 1424 aa-0.21□□□□□ -2.44
HMGB1P30-201ENST00000492455 BIRC6Q9NR09 4857 aa-0.22□□□□□ -2.44
HMGB1P30-201ENST00000492455 ANKRD11Q6UB99 2663 aaPredicted RBP-0.22□□□□□ -2.44
HMGB1P30-201ENST00000492455 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.22□□□□□ -2.44
HMGB1P30-201ENST00000492455 SONP18583 2426 aaKnown RBP-0.22□□□□□ -2.44
HMGB1P30-201ENST00000492455 CHD1O14646 1710 aa-0.22□□□□□ -2.44
HMGB1P30-201ENST00000492455 SPHKAPQ2M3C7 1700 aa-0.22□□□□□ -2.44
HMGB1P30-201ENST00000492455 MTORP42345 2549 aa-0.22□□□□□ -2.44
HMGB1P30-201ENST00000492455 USP9YO00507 2555 aaPredicted RBP-0.22□□□□□ -2.45
HMGB1P30-201ENST00000492455 TOPAZ1Q8N9V7 1692 aa-0.23□□□□□ -2.45
HMGB1P30-201ENST00000492455 ABCA3Q99758 1704 aa-0.23□□□□□ -2.45
HMGB1P30-201ENST00000492455 RGPD2P0DJD1 1756 aa-0.23□□□□□ -2.45
HMGB1P30-201ENST00000492455 DEFA5Q01523 94 aa-0.23□□□□□ -2.45
HMGB1P30-201ENST00000492455 KRTAP6-2Q3LI66 62 aa-0.23□□□□□ -2.45
HMGB1P30-201ENST00000492455 ATP5EP2Q5VTU8 51 aa-0.23□□□□□ -2.45
HMGB1P30-201ENST00000492455 DOPEY1Q5JWR5 2465 aa-0.23□□□□□ -2.45
HMGB1P30-201ENST00000492455 DNHD1Q96M86 4753 aa-0.23□□□□□ -2.45
HMGB1P30-201ENST00000492455 TROQ12816 1431 aaPredicted RBP-0.23□□□□□ -2.45
HMGB1P30-201ENST00000492455 FANCAO15360 1455 aa-0.23□□□□□ -2.45
HMGB1P30-201ENST00000492455 ZFYVE16Q7Z3T8 1539 aa-0.23□□□□□ -2.45
HMGB1P30-201ENST00000492455 LRRC7Q96NW7 1537 aa-0.23□□□□□ -2.45
HMGB1P30-201ENST00000492455 CICQ96RK0 1608 aaPredicted RBP-0.24□□□□□ -2.45
HMGB1P30-201ENST00000492455 SHPRHQ149N8 1683 aa-0.24□□□□□ -2.45
HMGB1P30-201ENST00000492455 NBASA2RRP1 2371 aa-0.24□□□□□ -2.45
HMGB1P30-201ENST00000492455 ANKRD36A6QL64 1941 aa-0.24□□□□□ -2.45
HMGB1P30-201ENST00000492455 PRLHP81277 87 aa-0.24□□□□□ -2.45
HMGB1P30-201ENST00000492455 ADIRFQ15847 76 aa-0.24□□□□□ -2.45
HMGB1P30-201ENST00000492455 DEFB110Q30KQ9 67 aa-0.24□□□□□ -2.45
HMGB1P30-201ENST00000492455 LELP1Q5T871 98 aa-0.24□□□□□ -2.45
HMGB1P30-201ENST00000492455 ACACAQ13085 2346 aa-0.24□□□□□ -2.45
HMGB1P30-201ENST00000492455 PKD1P98161 4303 aa-0.24□□□□□ -2.45
HMGB1P30-201ENST00000492455 TARBP1Q13395 1621 aaKnown RBP-0.24□□□□□ -2.45
HMGB1P30-201ENST00000492455 C5P01031 1676 aa-0.24□□□□□ -2.45
HMGB1P30-201ENST00000492455 MARF1Q9Y4F3 1742 aaKnown RBP-0.24□□□□□ -2.45
HMGB1P30-201ENST00000492455 KIF20BQ96Q89 1820 aa-0.24□□□□□ -2.45
HMGB1P30-201ENST00000492455 NBEAQ8NFP9 2946 aa-0.25□□□□□ -2.45
HMGB1P30-201ENST00000492455 S100A13Q99584 98 aa-0.25□□□□□ -2.45
HMGB1P30-201ENST00000492455 C20orf78Q9BR46 151 aa-0.25□□□□□ -2.45
HMGB1P30-201ENST00000492455 S4R3F8 94 aa-0.25□□□□□ -2.45
HMGB1P30-201ENST00000492455 ATP7BP35670 1465 aa-0.25□□□□□ -2.45
HMGB1P30-201ENST00000492455 NRXN1Q9ULB1 1477 aa-0.25□□□□□ -2.45
HMGB1P30-201ENST00000492455 CC2D2AQ9P2K1 1620 aa-0.25□□□□□ -2.45
HMGB1P30-201ENST00000492455 MON2Q7Z3U7 1717 aa-0.25□□□□□ -2.45
HMGB1P30-201ENST00000492455 RGPD8O14715 1765 aaPredicted RBP-0.25□□□□□ -2.45
HMGB1P30-201ENST00000492455 BCORQ6W2J9 1755 aa-0.25□□□□□ -2.45
HMGB1P30-201ENST00000492455 RGPD5Q99666 1765 aa-0.25□□□□□ -2.45
HMGB1P30-201ENST00000492455 MGAM2Q2M2H8 2515 aa-0.25□□□□□ -2.45
HMGB1P30-201ENST00000492455 FAT3Q8TDW7 4589 aa-0.25□□□□□ -2.45
HMGB1P30-201ENST00000492455 REV3LO60673 3130 aa-0.26□□□□□ -2.45
HMGB1P30-201ENST00000492455 CLTCQ00610 1675 aaKnown RBP-0.26□□□□□ -2.45
HMGB1P30-201ENST00000492455 PTPN23Q9H3S7 1636 aa-0.26□□□□□ -2.45
HMGB1P30-201ENST00000492455 URB2Q14146 1524 aaKnown RBP-0.26□□□□□ -2.45
HMGB1P30-201ENST00000492455 IAPPP10997 89 aa-0.26□□□□□ -2.45
HMGB1P30-201ENST00000492455 KRTAP19-6Q3LI70 58 aa-0.26□□□□□ -2.45
HMGB1P30-201ENST00000492455 UBL5Q9BZL1 73 aa-0.26□□□□□ -2.45
HMGB1P30-201ENST00000492455 MYO18BQ8IUG5 2567 aa-0.26□□□□□ -2.45
HMGB1P30-201ENST00000492455 LRRK2Q5S007 2527 aa-0.26□□□□□ -2.45
HMGB1P30-201ENST00000492455 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.26□□□□□ -2.45
HMGB1P30-201ENST00000492455 DMXL1Q9Y485 3027 aa-0.27□□□□□ -2.45
HMGB1P30-201ENST00000492455 QSER1Q2KHR3 1735 aa-0.27□□□□□ -2.45
HMGB1P30-201ENST00000492455 PKD1L3Q7Z443 1732 aa-0.27□□□□□ -2.45
HMGB1P30-201ENST00000492455 COL4A6Q14031 1691 aa-0.27□□□□□ -2.45
HMGB1P30-201ENST00000492455 MAGI3Q5TCQ9 1506 aa-0.27□□□□□ -2.45
HMGB1P30-201ENST00000492455 NDUFA4O00483 81 aa-0.27□□□□□ -2.45
HMGB1P30-201ENST00000492455 TNRC18O15417 2968 aaPredicted RBP-0.27□□□□□ -2.45
HMGB1P30-201ENST00000492455 MT1AP04731 61 aa-0.27□□□□□ -2.45
HMGB1P30-201ENST00000492455 BVES-AS1Q5T3Y7 98 aa-0.27□□□□□ -2.45
HMGB1P30-201ENST00000492455 DEFB106AQ8N104 65 aa-0.27□□□□□ -2.45
HMGB1P30-201ENST00000492455 SPRR2FQ96RM1 72 aa-0.27□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms