RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 A0A0B4J2C4 111 aa4.83□□□□□ -1.64
CLDN1-202ENST00000490800 NDUFC2-KCTD14E9PQ53 114 aa4.83□□□□□ -1.64
CLDN1-202ENST00000490800 TLX1NBP0CAT3 122 aa4.83□□□□□ -1.64
CLDN1-202ENST00000490800 KRTAP5-3Q6L8H2 238 aa4.83□□□□□ -1.64
CLDN1-202ENST00000490800 RAB37Q96AX2 223 aa4.83□□□□□ -1.64
CLDN1-202ENST00000490800 DMBT1Q9UGM3 2413 aaPredicted RBP4.83□□□□□ -1.64
CLDN1-202ENST00000490800 IGKV2-28A0A075B6P5 120 aa4.82□□□□□ -1.64
CLDN1-202ENST00000490800 IGKV2D-28P01615 120 aa4.82□□□□□ -1.64
CLDN1-202ENST00000490800 GAGE2EQ4V326 116 aa4.82□□□□□ -1.64
CLDN1-202ENST00000490800 Q6ZRP5 223 aa4.82□□□□□ -1.64
CLDN1-202ENST00000490800 SCXQ7RTU7 201 aa4.82□□□□□ -1.64
CLDN1-202ENST00000490800 Q8NDZ9 215 aa4.82□□□□□ -1.64
CLDN1-202ENST00000490800 XAGE1AQ9HD64 81 aa4.82□□□□□ -1.64
CLDN1-202ENST00000490800 GAGE2DQ9UEU5 116 aa4.82□□□□□ -1.64
CLDN1-202ENST00000490800 PRO1854Q9UHT4 67 aa4.82□□□□□ -1.64
CLDN1-202ENST00000490800 NDUFC2O95298 119 aa4.81□□□□□ -1.64
CLDN1-202ENST00000490800 RPL18AQ02543 176 aaKnown RBP4.81□□□□□ -1.64
CLDN1-202ENST00000490800 CIRBP-AS1Q8TBR5 109 aa4.81□□□□□ -1.64
CLDN1-202ENST00000490800 NAA38Q9BRA0 125 aaKnown RBP4.81□□□□□ -1.64
CLDN1-202ENST00000490800 LRP1Q07954 4544 aaKnown RBP4.81□□□□□ -1.64
CLDN1-202ENST00000490800 LOC107984640A0A0U1RRK4 108 aa4.8□□□□□ -1.64
CLDN1-202ENST00000490800 A0A1B0GV90 55 aa4.8□□□□□ -1.64
CLDN1-202ENST00000490800 TSPAN13O95857 204 aa4.8□□□□□ -1.64
CLDN1-202ENST00000490800 RPL13AP40429 203 aaKnown RBP4.8□□□□□ -1.64
CLDN1-202ENST00000490800 PRR3P79522 188 aaKnown RBP4.8□□□□□ -1.64
CLDN1-202ENST00000490800 C9orf129Q5T035 196 aaKnown RBP4.8□□□□□ -1.64
CLDN1-202ENST00000490800 LINC00337Q8N6G1 96 aa4.8□□□□□ -1.64
CLDN1-202ENST00000490800 TRAV13-2A0A0B4J235 113 aa4.79□□□□□ -1.64
CLDN1-202ENST00000490800 H3BUT2 72 aa4.79□□□□□ -1.64
CLDN1-202ENST00000490800 GAGE2BQ13066 116 aa4.79□□□□□ -1.64
CLDN1-202ENST00000490800 C9orf163Q8N9P6 203 aa4.79□□□□□ -1.64
CLDN1-202ENST00000490800 MPLKIPQ8TAP9 179 aa4.79□□□□□ -1.64
CLDN1-202ENST00000490800 FAT3Q8TDW7 4589 aa4.79□□□□□ -1.64
CLDN1-202ENST00000490800 KRTAP29-1A8MX34 341 aaPredicted RBP4.78□□□□□ -1.64
CLDN1-202ENST00000490800 H7C2G1 150 aa4.78□□□□□ -1.64
CLDN1-202ENST00000490800 NCR3O14931 201 aa4.78□□□□□ -1.64
CLDN1-202ENST00000490800 VPREB1P12018 145 aa4.78□□□□□ -1.64
CLDN1-202ENST00000490800 KRTAP10-4P60372 401 aaPredicted RBP4.78□□□□□ -1.64
CLDN1-202ENST00000490800 A0A096LNI7 61 aa4.77□□□□□ -1.65
CLDN1-202ENST00000490800 TRBV10-2A0A0K0K1G8 114 aa4.77□□□□□ -1.65
CLDN1-202ENST00000490800 A0A1W2PPM0 123 aa4.77□□□□□ -1.65
CLDN1-202ENST00000490800 Q1RN00 199 aa4.77□□□□□ -1.65
CLDN1-202ENST00000490800 SDIM1Q6ZPB5 146 aa4.77□□□□□ -1.65
CLDN1-202ENST00000490800 IGLV5-37A0A075B6J1 123 aa4.76□□□□□ -1.65
CLDN1-202ENST00000490800 FAM168BA1KXE4 195 aa4.76□□□□□ -1.65
CLDN1-202ENST00000490800 KRTAP7-1Q8IUC3 87 aa4.76□□□□□ -1.65
CLDN1-202ENST00000490800 OR13C6PQ8NH95 151 aa4.76□□□□□ -1.65
CLDN1-202ENST00000490800 PKIGQ9Y2B9 76 aa4.76□□□□□ -1.65
CLDN1-202ENST00000490800 IGKV2-24A0A0C4DH68 120 aa4.75□□□□□ -1.65
CLDN1-202ENST00000490800 PANO1I0J062 215 aa4.75□□□□□ -1.65
CLDN1-202ENST00000490800 M0R378 163 aa4.75□□□□□ -1.65
CLDN1-202ENST00000490800 IGLV6-57P01721 117 aa4.75□□□□□ -1.65
CLDN1-202ENST00000490800 CHTF8P0CG12 524 aa4.75□□□□□ -1.65
CLDN1-202ENST00000490800 FABP2P12104 132 aa4.75□□□□□ -1.65
CLDN1-202ENST00000490800 SMIM11BQ8TCY0 68 aa4.75□□□□□ -1.65
CLDN1-202ENST00000490800 TRBV10-3A0A0K0K1G6 114 aa4.74□□□□□ -1.65
CLDN1-202ENST00000490800 A0A1W2PNN7 141 aa4.74□□□□□ -1.65
CLDN1-202ENST00000490800 RPL28P46779 137 aaKnown RBP4.74□□□□□ -1.65
CLDN1-202ENST00000490800 PSMB2P49721 201 aa4.74□□□□□ -1.65
CLDN1-202ENST00000490800 RPL37AP61513 92 aaKnown RBP4.74□□□□□ -1.65
CLDN1-202ENST00000490800 VAMP3Q15836 100 aa4.74□□□□□ -1.65
CLDN1-202ENST00000490800 S100A7L2Q5SY68 101 aa4.74□□□□□ -1.65
CLDN1-202ENST00000490800 FAM19A5Q7Z5A7 132 aaPredicted RBP4.74□□□□□ -1.65
CLDN1-202ENST00000490800 C7orf33Q8WU49 177 aa4.74□□□□□ -1.65
CLDN1-202ENST00000490800 DPH3Q96FX2 82 aa4.74□□□□□ -1.65
CLDN1-202ENST00000490800 TMEM126AQ9H061 195 aa4.74□□□□□ -1.65
CLDN1-202ENST00000490800 HMCN2Q8NDA2 5059 aa4.73□□□□□ -1.65
CLDN1-202ENST00000490800 K7EP34 96 aa4.73□□□□□ -1.65
CLDN1-202ENST00000490800 OXTP01178 125 aa4.73□□□□□ -1.65
CLDN1-202ENST00000490800 SCGB1C2P0DMR2 95 aa4.73□□□□□ -1.65
CLDN1-202ENST00000490800 NKAPP1Q8N9T2 125 aa4.73□□□□□ -1.65
CLDN1-202ENST00000490800 C22orf24Q9Y442 160 aa4.73□□□□□ -1.65
CLDN1-202ENST00000490800 SPCS1Q9Y6A9 102 aa4.73□□□□□ -1.65
CLDN1-202ENST00000490800 TCL1BO95988 128 aa4.72□□□□□ -1.65
CLDN1-202ENST00000490800 LYRM7Q5U5X0 104 aa4.72□□□□□ -1.65
CLDN1-202ENST00000490800 SPACA4Q8TDM5 124 aa4.72□□□□□ -1.65
CLDN1-202ENST00000490800 LINC00474Q9P2X8 69 aa4.72□□□□□ -1.65
CLDN1-202ENST00000490800 TRAV23DV6A0A075B6W5 121 aa4.71□□□□□ -1.66
CLDN1-202ENST00000490800 M0QXV9 152 aa4.71□□□□□ -1.66
CLDN1-202ENST00000490800 COX6CP09669 75 aa4.71□□□□□ -1.66
CLDN1-202ENST00000490800 MRPL55Q7Z7F7 128 aaKnown RBP4.71□□□□□ -1.66
CLDN1-202ENST00000490800 CLEC2BQ92478 149 aa4.71□□□□□ -1.66
CLDN1-202ENST00000490800 LINC00167Q96N53 147 aa4.71□□□□□ -1.66
CLDN1-202ENST00000490800 IGLV1-50A0A075B6I6 118 aa4.7□□□□□ -1.66
CLDN1-202ENST00000490800 TRBV20-1A0A075B6N2 111 aa4.7□□□□□ -1.66
CLDN1-202ENST00000490800 A0A087WYN8 130 aa4.7□□□□□ -1.66
CLDN1-202ENST00000490800 RPL37AP8A6NKH3 93 aa4.7□□□□□ -1.66
CLDN1-202ENST00000490800 UBE2V1Q13404 147 aa4.7□□□□□ -1.66
CLDN1-202ENST00000490800 C6orf99Q4VX62 202 aa4.7□□□□□ -1.66
CLDN1-202ENST00000490800 GTF2H5Q6ZYL4 71 aa4.7□□□□□ -1.66
CLDN1-202ENST00000490800 KCNQ1DNQ9H478 68 aa4.7□□□□□ -1.66
CLDN1-202ENST00000490800 LST1O00453 97 aa4.69□□□□□ -1.66
CLDN1-202ENST00000490800 ZNF73O43830 326 aaPredicted RBP4.69□□□□□ -1.66
CLDN1-202ENST00000490800 PHF5AQ7RTV0 110 aaKnown RBP4.69□□□□□ -1.66
CLDN1-202ENST00000490800 FAM218AQ96MZ4 157 aa4.69□□□□□ -1.66
CLDN1-202ENST00000490800 CBY1Q9Y3M2 126 aa4.69□□□□□ -1.66
CLDN1-202ENST00000490800 UBR4Q5T4S7 5183 aa4.68□□□□□ -1.66
CLDN1-202ENST00000490800 PKHD1L1Q86WI1 4243 aa4.68□□□□□ -1.66
CLDN1-202ENST00000490800 H0YGX0 51 aa4.68□□□□□ -1.66
CLDN1-202ENST00000490800 H3BMG7 143 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms