RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	S100A7L2	Q5SY68	101 aa		11.41	□□□□□ -0.58
SRM-206	ENST00000490101	C7orf33	Q8WU49	177 aa		11.41	□□□□□ -0.58
SRM-206	ENST00000490101	LRP1	Q07954	4544 aa	Known RBP	11.41	□□□□□ -0.58
SRM-206	ENST00000490101		A0A087WYN8	130 aa		11.4	□□□□□ -0.58
SRM-206	ENST00000490101		M0QXV9	152 aa		11.4	□□□□□ -0.58
SRM-206	ENST00000490101	TSPAN13	O95857	204 aa		11.4	□□□□□ -0.58
SRM-206	ENST00000490101	PLAC8	Q9NZF1	115 aa		11.4	□□□□□ -0.58
SRM-206	ENST00000490101	TRBV10-3	A0A0K0K1G6	114 aa		11.39	□□□□□ -0.59
SRM-206	ENST00000490101		H7C2G1	150 aa		11.39	□□□□□ -0.59
SRM-206	ENST00000490101	MRPL55	Q7Z7F7	128 aa	Known RBP	11.39	□□□□□ -0.59
SRM-206	ENST00000490101	CIRBP-AS1	Q8TBR5	109 aa		11.39	□□□□□ -0.59
SRM-206	ENST00000490101	C9orf118	A6NHY6	69 aa		11.38	□□□□□ -0.59
SRM-206	ENST00000490101	LINC00167	Q96N53	147 aa		11.38	□□□□□ -0.59
SRM-206	ENST00000490101	GAGE10	A6NGK3	116 aa		11.37	□□□□□ -0.59
SRM-206	ENST00000490101	KRTAP29-1	A8MX34	341 aa	Predicted RBP	11.37	□□□□□ -0.59
SRM-206	ENST00000490101	CBY1	Q9Y3M2	126 aa		11.37	□□□□□ -0.59
SRM-206	ENST00000490101	FAT3	Q8TDW7	4589 aa		11.36	□□□□□ -0.59
SRM-206	ENST00000490101	RPL28	P46779	137 aa	Known RBP	11.36	□□□□□ -0.59
SRM-206	ENST00000490101		Q1RN00	199 aa		11.36	□□□□□ -0.59
SRM-206	ENST00000490101	SMIM11B	Q8TCY0	68 aa		11.36	□□□□□ -0.59
SRM-206	ENST00000490101	IGLV1-50	A0A075B6I6	118 aa		11.35	□□□□□ -0.59
SRM-206	ENST00000490101	PHF5A	Q7RTV0	110 aa	Known RBP	11.34	□□□□□ -0.59
SRM-206	ENST00000490101	KCNQ1DN	Q9H478	68 aa		11.34	□□□□□ -0.59
SRM-206	ENST00000490101		H3BUT2	72 aa		11.33	□□□□□ -0.6
SRM-206	ENST00000490101	KRTAP10-4	P60372	401 aa	Predicted RBP	11.33	□□□□□ -0.6
SRM-206	ENST00000490101	NAA38	Q9BRA0	125 aa	Known RBP	11.33	□□□□□ -0.6
SRM-206	ENST00000490101	PKHD1L1	Q86WI1	4243 aa		11.33	□□□□□ -0.6
SRM-206	ENST00000490101	TRAV23DV6	A0A075B6W5	121 aa		11.32	□□□□□ -0.6
SRM-206	ENST00000490101	RPL37AP8	A6NKH3	93 aa		11.32	□□□□□ -0.6
SRM-206	ENST00000490101	PSMB2	P49721	201 aa		11.32	□□□□□ -0.6
SRM-206	ENST00000490101	HMCN2	Q8NDA2	5059 aa		11.32	□□□□□ -0.6
SRM-206	ENST00000490101	TRIAP1	O43715	76 aa		11.31	□□□□□ -0.6
SRM-206	ENST00000490101	PRY	O14603	147 aa		11.3	□□□□□ -0.6
SRM-206	ENST00000490101		A0A1W2PPM0	123 aa		11.29	□□□□□ -0.6
SRM-206	ENST00000490101	ZNF73	O43830	326 aa	Predicted RBP	11.28	□□□□□ -0.6
SRM-206	ENST00000490101	COX6C	P09669	75 aa		11.28	□□□□□ -0.6
SRM-206	ENST00000490101	RPL37A	P61513	92 aa	Known RBP	11.28	□□□□□ -0.6
SRM-206	ENST00000490101	UBE2B	P63146	152 aa		11.28	□□□□□ -0.6
SRM-206	ENST00000490101	C6orf99	Q4VX62	202 aa		11.28	□□□□□ -0.6
SRM-206	ENST00000490101	SPRR1A	P35321	89 aa		11.27	□□□□□ -0.61
SRM-206	ENST00000490101	DIRC1	Q969H9	104 aa		11.27	□□□□□ -0.61
SRM-206	ENST00000490101	TRBV7-6	A0A0J9YX20	115 aa		11.26	□□□□□ -0.61
SRM-206	ENST00000490101	LYRM7	Q5U5X0	104 aa		11.26	□□□□□ -0.61
SRM-206	ENST00000490101	KRTAP11-1	Q8IUC1	163 aa		11.26	□□□□□ -0.61
SRM-206	ENST00000490101		H0YGX0	51 aa		11.25	□□□□□ -0.61
SRM-206	ENST00000490101	OXT	P01178	125 aa		11.25	□□□□□ -0.61
SRM-206	ENST00000490101	SCGB1C2	P0DMR2	95 aa		11.25	□□□□□ -0.61
SRM-206	ENST00000490101	FABP2	P12104	132 aa		11.25	□□□□□ -0.61
SRM-206	ENST00000490101	VAMP3	Q15836	100 aa		11.25	□□□□□ -0.61
SRM-206	ENST00000490101	REG3G	Q6UW15	175 aa		11.25	□□□□□ -0.61
SRM-206	ENST00000490101	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	11.24	□□□□□ -0.61
SRM-206	ENST00000490101	UBR4	Q5T4S7	5183 aa		11.22	□□□□□ -0.61
SRM-206	ENST00000490101	COX7B	P24311	80 aa		11.21	□□□□□ -0.61
SRM-206	ENST00000490101	ELOF1	P60002	83 aa	Known RBP	11.21	□□□□□ -0.61
SRM-206	ENST00000490101	TRBV20-1	A0A075B6N2	111 aa		11.2	□□□□□ -0.62
SRM-206	ENST00000490101	ETDC	A0A1B0GVM5	59 aa		11.2	□□□□□ -0.62
SRM-206	ENST00000490101		B5MCH6	92 aa		11.19	□□□□□ -0.62
SRM-206	ENST00000490101	CLEC2B	Q92478	149 aa		11.19	□□□□□ -0.62
SRM-206	ENST00000490101		A0A1B0GV90	55 aa		11.18	□□□□□ -0.62
SRM-206	ENST00000490101	TCL1B	O95988	128 aa		11.18	□□□□□ -0.62
SRM-206	ENST00000490101	SPCS1	Q9Y6A9	102 aa		11.18	□□□□□ -0.62
SRM-206	ENST00000490101	BCE1	O60756	84 aa		11.17	□□□□□ -0.62
SRM-206	ENST00000490101	LINC00575	Q6W349	94 aa		11.17	□□□□□ -0.62
SRM-206	ENST00000490101	PSORS1C2	Q9UIG4	136 aa		11.17	□□□□□ -0.62
SRM-206	ENST00000490101	LST1	O00453	97 aa		11.16	□□□□□ -0.62
SRM-206	ENST00000490101		Q6ZRX8	168 aa		11.16	□□□□□ -0.62
SRM-206	ENST00000490101	FAM218A	Q96MZ4	157 aa		11.16	□□□□□ -0.62
SRM-206	ENST00000490101		A0A1B0GX51	115 aa		11.15	□□□□□ -0.62
SRM-206	ENST00000490101		H0Y9J4	135 aa		11.15	□□□□□ -0.62
SRM-206	ENST00000490101		K7EP34	96 aa		11.15	□□□□□ -0.62
SRM-206	ENST00000490101	ATXN8	Q156A1	80 aa		11.15	□□□□□ -0.62
SRM-206	ENST00000490101	FAM19A1	Q7Z5A9	133 aa		11.14	□□□□□ -0.63
SRM-206	ENST00000490101	TRAC	P01848	142 aa		11.13	□□□□□ -0.63
SRM-206	ENST00000490101	GTF2H5	Q6ZYL4	71 aa		11.13	□□□□□ -0.63
SRM-206	ENST00000490101	SLC25A20	O43772	301 aa		11.12	□□□□□ -0.63
SRM-206	ENST00000490101	SNCG	O76070	127 aa		11.12	□□□□□ -0.63
SRM-206	ENST00000490101	DHRS4-AS1	Q9P1J3	65 aa		11.12	□□□□□ -0.63
SRM-206	ENST00000490101	hADV29S1	A0JD25	119 aa		11.11	□□□□□ -0.63
SRM-206	ENST00000490101	KRTAP13-1	Q8IUC0	172 aa		11.11	□□□□□ -0.63
SRM-206	ENST00000490101		Q9BRP9	147 aa		11.11	□□□□□ -0.63
SRM-206	ENST00000490101	UBE2A	P49459	152 aa		11.1	□□□□□ -0.63
SRM-206	ENST00000490101	PRLH	P81277	87 aa		11.1	□□□□□ -0.63
SRM-206	ENST00000490101	C1orf137	Q5JT78	98 aa		11.1	□□□□□ -0.63
SRM-206	ENST00000490101		H3BMG7	143 aa		11.09	□□□□□ -0.63
SRM-206	ENST00000490101	SMCR5	Q8TEV8	140 aa		11.07	□□□□□ -0.64
SRM-206	ENST00000490101	IGLV7-43	P04211	117 aa		11.06	□□□□□ -0.64
SRM-206	ENST00000490101	UBE2V1	Q13404	147 aa		11.06	□□□□□ -0.64
SRM-206	ENST00000490101	DNAL4	O96015	105 aa		11.05	□□□□□ -0.64
SRM-206	ENST00000490101	MT1HL1	P0DM35	61 aa		11.05	□□□□□ -0.64
SRM-206	ENST00000490101	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	11.05	□□□□□ -0.64
SRM-206	ENST00000490101	ZNF861P	O60384	105 aa		11.04	□□□□□ -0.64
SRM-206	ENST00000490101	ERC2-IT1	O76042	136 aa		11.04	□□□□□ -0.64
SRM-206	ENST00000490101	HIGD2A	Q9BW72	106 aa		11.04	□□□□□ -0.64
SRM-206	ENST00000490101		C9JAW5	83 aa		11.03	□□□□□ -0.64
SRM-206	ENST00000490101		Q6ZQY7	126 aa		11.03	□□□□□ -0.64
SRM-206	ENST00000490101	OCIAD2	Q56VL3	154 aa		11.01	□□□□□ -0.65
SRM-206	ENST00000490101	ORMDL1	Q9P0S3	153 aa		11	□□□□□ -0.65
SRM-206	ENST00000490101	PRO0461	Q9UI25	63 aa		11	□□□□□ -0.65
SRM-206	ENST00000490101	TNXB	P22105	4242 aa		11	□□□□□ -0.65
SRM-206	ENST00000490101		H3BQ85	93 aa		10.99	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms