RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 TTTY13Q9BZ97 58 aa5.75□□□□□ -1.49
TMEM39A-210ENST00000490099 PRO1933Q9H354 126 aa5.75□□□□□ -1.49
TMEM39A-210ENST00000490099 HIGD1BQ9P298 99 aa5.75□□□□□ -1.49
TMEM39A-210ENST00000490099 ERG28Q9UKR5 140 aa5.75□□□□□ -1.49
TMEM39A-210ENST00000490099 RPL37AP8A6NKH3 93 aa5.74□□□□□ -1.49
TMEM39A-210ENST00000490099 Q6ZVH6 145 aa5.74□□□□□ -1.49
TMEM39A-210ENST00000490099 SND1-IT1Q9HBX3 110 aa5.74□□□□□ -1.49
TMEM39A-210ENST00000490099 A0A087X002 238 aa5.73□□□□□ -1.49
TMEM39A-210ENST00000490099 VPREB1P12018 145 aa5.73□□□□□ -1.49
TMEM39A-210ENST00000490099 LINC00158P58513 81 aa5.73□□□□□ -1.49
TMEM39A-210ENST00000490099 SPANXB1Q9NS25 103 aaPredicted RBP5.73□□□□□ -1.49
TMEM39A-210ENST00000490099 GAGE10A6NGK3 116 aa5.72□□□□□ -1.49
TMEM39A-210ENST00000490099 SMIM13P0DJ93 91 aa5.72□□□□□ -1.49
TMEM39A-210ENST00000490099 PFN2P35080 140 aa5.72□□□□□ -1.49
TMEM39A-210ENST00000490099 Q8NDZ9 215 aa5.72□□□□□ -1.49
TMEM39A-210ENST00000490099 SPANXDQ9BXN6 97 aa5.72□□□□□ -1.49
TMEM39A-210ENST00000490099 SPANXCQ9NY87 97 aa5.72□□□□□ -1.49
TMEM39A-210ENST00000490099 LPAP08519 4548 aa5.72□□□□□ -1.49
TMEM39A-210ENST00000490099 CRYGAP11844 174 aa5.71□□□□□ -1.5
TMEM39A-210ENST00000490099 IFITM1P13164 125 aa5.71□□□□□ -1.5
TMEM39A-210ENST00000490099 TAL2Q16559 108 aa5.71□□□□□ -1.5
TMEM39A-210ENST00000490099 FAM229BQ4G0N7 80 aa5.71□□□□□ -1.5
TMEM39A-210ENST00000490099 LCE4AQ5TA78 99 aa5.71□□□□□ -1.5
TMEM39A-210ENST00000490099 C2orf91Q6ZV80 131 aa5.71□□□□□ -1.5
TMEM39A-210ENST00000490099 HIST1H4GQ99525 98 aa5.71□□□□□ -1.5
TMEM39A-210ENST00000490099 DDTP30046 118 aa5.7□□□□□ -1.5
TMEM39A-210ENST00000490099 RPL24P83731 157 aaKnown RBP5.7□□□□□ -1.5
TMEM39A-210ENST00000490099 HSD52Q0P140 79 aa5.7□□□□□ -1.5
TMEM39A-210ENST00000490099 KRTAP13-2Q52LG2 175 aa5.7□□□□□ -1.5
TMEM39A-210ENST00000490099 MIR7-3HGQ8N6C7 128 aa5.7□□□□□ -1.5
TMEM39A-210ENST00000490099 NKAPP1Q8N9T2 125 aa5.7□□□□□ -1.5
TMEM39A-210ENST00000490099 LITAFQ99732 161 aa5.7□□□□□ -1.5
TMEM39A-210ENST00000490099 PPDPFQ9H3Y8 114 aa5.7□□□□□ -1.5
TMEM39A-210ENST00000490099 A0A0U1RRA0 63 aa5.69□□□□□ -1.5
TMEM39A-210ENST00000490099 M0R378 163 aa5.69□□□□□ -1.5
TMEM39A-210ENST00000490099 IGKV2-28A0A075B6P5 120 aa5.68□□□□□ -1.5
TMEM39A-210ENST00000490099 M0R143 59 aa5.68□□□□□ -1.5
TMEM39A-210ENST00000490099 IGKV2D-28P01615 120 aa5.68□□□□□ -1.5
TMEM39A-210ENST00000490099 CTAG1AP78358 180 aa5.68□□□□□ -1.5
TMEM39A-210ENST00000490099 ADAMTSL4-AS1Q5T5F5 129 aa5.68□□□□□ -1.5
TMEM39A-210ENST00000490099 TMEM126AQ9H061 195 aa5.68□□□□□ -1.5
TMEM39A-210ENST00000490099 ANAPC11Q9NYG5 84 aa5.68□□□□□ -1.5
TMEM39A-210ENST00000490099 LOC107984156A0A0G2JMH3 177 aa5.67□□□□□ -1.5
TMEM39A-210ENST00000490099 UBE2AP49459 152 aa5.67□□□□□ -1.5
TMEM39A-210ENST00000490099 ARL17AQ8IVW1 177 aa5.67□□□□□ -1.5
TMEM39A-210ENST00000490099 DAND5Q8N907 189 aa5.67□□□□□ -1.5
TMEM39A-210ENST00000490099 TYMSOSQ8TAI1 123 aa5.67□□□□□ -1.5
TMEM39A-210ENST00000490099 LINC00308Q8TCZ7 52 aa5.67□□□□□ -1.5
TMEM39A-210ENST00000490099 KRTAP9-7A8MTY7 169 aa5.66□□□□□ -1.5
TMEM39A-210ENST00000490099 PRLHP81277 87 aa5.66□□□□□ -1.5
TMEM39A-210ENST00000490099 PRR4Q16378 134 aa5.66□□□□□ -1.5
TMEM39A-210ENST00000490099 MUSTN1Q8IVN3 82 aa5.66□□□□□ -1.5
TMEM39A-210ENST00000490099 CEND1Q8N111 149 aa5.66□□□□□ -1.5
TMEM39A-210ENST00000490099 PCP4L1A6NKN8 68 aa5.65□□□□□ -1.5
TMEM39A-210ENST00000490099 NDUFC2O95298 119 aa5.65□□□□□ -1.5
TMEM39A-210ENST00000490099 TSPAN13O95857 204 aa5.65□□□□□ -1.5
TMEM39A-210ENST00000490099 NPC2P61916 151 aa5.65□□□□□ -1.5
TMEM39A-210ENST00000490099 KRTAP4-8A0A0G2JLE6 195 aa5.64□□□□□ -1.51
TMEM39A-210ENST00000490099 SPRR1AP35321 89 aa5.64□□□□□ -1.51
TMEM39A-210ENST00000490099 FAM19A1Q7Z5A9 133 aa5.64□□□□□ -1.51
TMEM39A-210ENST00000490099 A6NDN8 102 aa5.63□□□□□ -1.51
TMEM39A-210ENST00000490099 KRTAP4-16G5E9R7 235 aaPredicted RBP5.63□□□□□ -1.51
TMEM39A-210ENST00000490099 SOSTDC1Q6X4U4 206 aa5.63□□□□□ -1.51
TMEM39A-210ENST00000490099 KCNQ1DNQ9H478 68 aa5.63□□□□□ -1.51
TMEM39A-210ENST00000490099 A4D1N5 150 aa5.62□□□□□ -1.51
TMEM39A-210ENST00000490099 HINT1P49773 126 aaPredicted RBP5.62□□□□□ -1.51
TMEM39A-210ENST00000490099 BVES-AS1Q5T3Y7 98 aa5.62□□□□□ -1.51
TMEM39A-210ENST00000490099 LINC00304Q8N9R0 145 aa5.62□□□□□ -1.51
TMEM39A-210ENST00000490099 TRAV13-2A0A0B4J235 113 aa5.61□□□□□ -1.51
TMEM39A-210ENST00000490099 TRBV10-2A0A0K0K1G8 114 aa5.61□□□□□ -1.51
TMEM39A-210ENST00000490099 FXYD2P54710 66 aa5.61□□□□□ -1.51
TMEM39A-210ENST00000490099 LINC00337Q8N6G1 96 aa5.61□□□□□ -1.51
TMEM39A-210ENST00000490099 RAB37Q96AX2 223 aa5.61□□□□□ -1.51
TMEM39A-210ENST00000490099 SPRR4Q96PI1 79 aa5.61□□□□□ -1.51
TMEM39A-210ENST00000490099 CBY1Q9Y3M2 126 aa5.61□□□□□ -1.51
TMEM39A-210ENST00000490099 A0A0B4J2C4 111 aa5.6□□□□□ -1.51
TMEM39A-210ENST00000490099 PRYO14603 147 aa5.6□□□□□ -1.51
TMEM39A-210ENST00000490099 BATFQ16520 125 aa5.6□□□□□ -1.51
TMEM39A-210ENST00000490099 NHP2Q9NX24 153 aaKnown RBP5.6□□□□□ -1.51
TMEM39A-210ENST00000490099 MUC2Q02817 5179 aa5.6□□□□□ -1.51
TMEM39A-210ENST00000490099 S100A7L2Q5SY68 101 aa5.59□□□□□ -1.51
TMEM39A-210ENST00000490099 C3orf22Q8N5N4 141 aa5.59□□□□□ -1.51
TMEM39A-210ENST00000490099 A0A1B0GWB2 263 aa5.58□□□□□ -1.52
TMEM39A-210ENST00000490099 NCR3O14931 201 aa5.58□□□□□ -1.52
TMEM39A-210ENST00000490099 CFC1BP0CG36 223 aa5.58□□□□□ -1.52
TMEM39A-210ENST00000490099 CFC1P0CG37 223 aa5.58□□□□□ -1.52
TMEM39A-210ENST00000490099 SPAG11AQ6PDA7 123 aa5.58□□□□□ -1.52
TMEM39A-210ENST00000490099 OR13C6PQ8NH95 151 aa5.58□□□□□ -1.52
TMEM39A-210ENST00000490099 HIGD2AQ9BW72 106 aa5.58□□□□□ -1.52
TMEM39A-210ENST00000490099 PRO1854Q9UHT4 67 aa5.58□□□□□ -1.52
TMEM39A-210ENST00000490099 TRBV10-3A0A0K0K1G6 114 aa5.57□□□□□ -1.52
TMEM39A-210ENST00000490099 TPRXLQ17RH7 258 aa5.57□□□□□ -1.52
TMEM39A-210ENST00000490099 LINC00483Q53H64 154 aa5.57□□□□□ -1.52
TMEM39A-210ENST00000490099 COL5A1-AS1Q5SY13 56 aa5.56□□□□□ -1.52
TMEM39A-210ENST00000490099 LCE1DQ5T752 114 aa5.56□□□□□ -1.52
TMEM39A-210ENST00000490099 SMCR5Q8TEV8 140 aa5.56□□□□□ -1.52
TMEM39A-210ENST00000490099 RETNLBQ9BQ08 111 aa5.56□□□□□ -1.52
TMEM39A-210ENST00000490099 SNHG12Q9BXW3 62 aa5.56□□□□□ -1.52
TMEM39A-210ENST00000490099 ZNF706Q9Y5V0 76 aaPredicted RBP5.56□□□□□ -1.52
TMEM39A-210ENST00000490099 IGLV7-46A0A075B6I9 117 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms