RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 SOSTDC1Q6X4U4 206 aa10.35□□□□□ -0.75
MDC1-206ENST00000489540 TTTY13Q9BZ97 58 aa10.35□□□□□ -0.75
MDC1-206ENST00000489540 SPRR1AP35321 89 aa10.34□□□□□ -0.75
MDC1-206ENST00000489540 LINC00337Q8N6G1 96 aa10.34□□□□□ -0.75
MDC1-206ENST00000489540 LINC00308Q8TCZ7 52 aa10.34□□□□□ -0.75
MDC1-206ENST00000489540 HMCN2Q8NDA2 5059 aa10.33□□□□□ -0.76
MDC1-206ENST00000489540 EIF4EBP3O60516 100 aaPredicted RBP10.33□□□□□ -0.76
MDC1-206ENST00000489540 CRYGAP11844 174 aa10.33□□□□□ -0.76
MDC1-206ENST00000489540 S100A7L2Q5SY68 101 aa10.33□□□□□ -0.76
MDC1-206ENST00000489540 SCGB1D4Q6XE38 83 aa10.33□□□□□ -0.76
MDC1-206ENST00000489540 ETDCA0A1B0GVM5 59 aa10.32□□□□□ -0.76
MDC1-206ENST00000489540 SNHG12Q9BXW3 62 aa10.32□□□□□ -0.76
MDC1-206ENST00000489540 IGLV6-57P01721 117 aa10.31□□□□□ -0.76
MDC1-206ENST00000489540 HIGD2AQ9BW72 106 aa10.31□□□□□ -0.76
MDC1-206ENST00000489540 SPANXCQ9NY87 97 aa10.31□□□□□ -0.76
MDC1-206ENST00000489540 KRTAP4-16G5E9R7 235 aaPredicted RBP10.3□□□□□ -0.76
MDC1-206ENST00000489540 FAM229BQ4G0N7 80 aa10.29□□□□□ -0.76
MDC1-206ENST00000489540 CBY1Q9Y3M2 126 aa10.29□□□□□ -0.76
MDC1-206ENST00000489540 SLC25A34Q6PIV7 304 aa10.28□□□□□ -0.76
MDC1-206ENST00000489540 PCP2Q8IVA1 136 aa10.28□□□□□ -0.76
MDC1-206ENST00000489540 COPS9Q8WXC6 57 aa10.28□□□□□ -0.76
MDC1-206ENST00000489540 SPANXDQ9BXN6 97 aa10.28□□□□□ -0.76
MDC1-206ENST00000489540 ANAPC11Q9NYG5 84 aa10.28□□□□□ -0.76
MDC1-206ENST00000489540 A0A087X002 238 aa10.27□□□□□ -0.77
MDC1-206ENST00000489540 COL5A1-AS1Q5SY13 56 aa10.27□□□□□ -0.77
MDC1-206ENST00000489540 Q6ZVH6 145 aa10.27□□□□□ -0.77
MDC1-206ENST00000489540 TRAV23DV6A0A075B6W5 121 aa10.25□□□□□ -0.77
MDC1-206ENST00000489540 B5MCH6 92 aa10.25□□□□□ -0.77
MDC1-206ENST00000489540 IFITM1P13164 125 aa10.25□□□□□ -0.77
MDC1-206ENST00000489540 TYMSOSQ8TAI1 123 aa10.25□□□□□ -0.77
MDC1-206ENST00000489540 PPDPFQ9H3Y8 114 aa10.25□□□□□ -0.77
MDC1-206ENST00000489540 ZNF706Q9Y5V0 76 aaPredicted RBP10.25□□□□□ -0.77
MDC1-206ENST00000489540 A0A1B0GV90 55 aa10.24□□□□□ -0.77
MDC1-206ENST00000489540 SMCR5Q8TEV8 140 aa10.24□□□□□ -0.77
MDC1-206ENST00000489540 OR13C6PQ8NH95 151 aa10.24□□□□□ -0.77
MDC1-206ENST00000489540 ZNF73O43830 326 aaPredicted RBP10.23□□□□□ -0.77
MDC1-206ENST00000489540 COX8AP10176 69 aa10.23□□□□□ -0.77
MDC1-206ENST00000489540 SPRR4Q96PI1 79 aa10.23□□□□□ -0.77
MDC1-206ENST00000489540 HINT1P49773 126 aaPredicted RBP10.22□□□□□ -0.77
MDC1-206ENST00000489540 BATFQ16520 125 aa10.21□□□□□ -0.78
MDC1-206ENST00000489540 KRTAP13-2Q52LG2 175 aa10.21□□□□□ -0.78
MDC1-206ENST00000489540 Q6ZRX8 168 aa10.21□□□□□ -0.78
MDC1-206ENST00000489540 A6NJY4 79 aa10.2□□□□□ -0.78
MDC1-206ENST00000489540 DLEU1O43261 78 aa10.2□□□□□ -0.78
MDC1-206ENST00000489540 MUSTN1Q8IVN3 82 aa10.2□□□□□ -0.78
MDC1-206ENST00000489540 Q9BRP9 147 aa10.17□□□□□ -0.78
MDC1-206ENST00000489540 ERC2-IT1O76042 136 aa10.16□□□□□ -0.78
MDC1-206ENST00000489540 LINC00483Q53H64 154 aa10.15□□□□□ -0.79
MDC1-206ENST00000489540 TSPAN13O95857 204 aa10.14□□□□□ -0.79
MDC1-206ENST00000489540 GAGE2AQ6NT46 116 aa10.14□□□□□ -0.79
MDC1-206ENST00000489540 A6NDN8 102 aa10.13□□□□□ -0.79
MDC1-206ENST00000489540 C3orf22Q8N5N4 141 aa10.13□□□□□ -0.79
MDC1-206ENST00000489540 LINC00304Q8N9R0 145 aa10.13□□□□□ -0.79
MDC1-206ENST00000489540 TRAV13-2A0A0B4J235 113 aa10.12□□□□□ -0.79
MDC1-206ENST00000489540 HSD52Q0P140 79 aa10.11□□□□□ -0.79
MDC1-206ENST00000489540 C6orf99Q4VX62 202 aa10.11□□□□□ -0.79
MDC1-206ENST00000489540 BVES-AS1Q5T3Y7 98 aa10.11□□□□□ -0.79
MDC1-206ENST00000489540 DHRS4-AS1Q9P1J3 65 aa10.11□□□□□ -0.79
MDC1-206ENST00000489540 COX7BP24311 80 aa10.1□□□□□ -0.79
MDC1-206ENST00000489540 HIGD1BQ9P298 99 aa10.1□□□□□ -0.79
MDC1-206ENST00000489540 TRBV7-6A0A0J9YX20 115 aa10.09□□□□□ -0.79
MDC1-206ENST00000489540 ELOF1P60002 83 aaKnown RBP10.09□□□□□ -0.79
MDC1-206ENST00000489540 C2orf91Q6ZV80 131 aa10.09□□□□□ -0.79
MDC1-206ENST00000489540 SPAG11AQ6PDA7 123 aa10.08□□□□□ -0.8
MDC1-206ENST00000489540 A4D1N5 150 aa10.06□□□□□ -0.8
MDC1-206ENST00000489540 PRR4Q16378 134 aa10.06□□□□□ -0.8
MDC1-206ENST00000489540 C4orf48Q5BLP8 95 aa10.06□□□□□ -0.8
MDC1-206ENST00000489540 ST20-AS1Q8NBB2 130 aa10.06□□□□□ -0.8
MDC1-206ENST00000489540 HIST1H4GQ99525 98 aa10.06□□□□□ -0.8
MDC1-206ENST00000489540 A0A1B0GWB2 263 aa10.05□□□□□ -0.8
MDC1-206ENST00000489540 SSBP3-AS1Q7Z2R9 100 aa10.05□□□□□ -0.8
MDC1-206ENST00000489540 TAL2Q16559 108 aa10.04□□□□□ -0.8
MDC1-206ENST00000489540 Q8NBF4 154 aa10.04□□□□□ -0.8
MDC1-206ENST00000489540 LRP2P98164 4655 aa10.03□□□□□ -0.8
MDC1-206ENST00000489540 IGLV9-49A0A0B4J1Y8 123 aa10.03□□□□□ -0.8
MDC1-206ENST00000489540 SMIM11BQ8TCY0 68 aa10.03□□□□□ -0.8
MDC1-206ENST00000489540 UBR4Q5T4S7 5183 aa10.02□□□□□ -0.8
MDC1-206ENST00000489540 SPRR1BP22528 89 aa10.01□□□□□ -0.81
MDC1-206ENST00000489540 MOBPQ13875 183 aa10.01□□□□□ -0.81
MDC1-206ENST00000489540 TAX1BP3O14907 124 aa9.99□□□□□ -0.81
MDC1-206ENST00000489540 VAMP3Q15836 100 aa9.99□□□□□ -0.81
MDC1-206ENST00000489540 SPINK1P00995 79 aa9.99□□□□□ -0.81
MDC1-206ENST00000489540 UBE2V1Q13404 147 aa9.98□□□□□ -0.81
MDC1-206ENST00000489540 NHP2Q9NX24 153 aaKnown RBP9.98□□□□□ -0.81
MDC1-206ENST00000489540 C9orf153Q5TBE3 101 aa9.97□□□□□ -0.81
MDC1-206ENST00000489540 LAMTOR3Q9UHA4 124 aa9.97□□□□□ -0.81
MDC1-206ENST00000489540 TEX49A0A1B0GTD5 131 aa9.96□□□□□ -0.82
MDC1-206ENST00000489540 SLC25A20O43772 301 aa9.95□□□□□ -0.82
MDC1-206ENST00000489540 CEND1Q8N111 149 aa9.95□□□□□ -0.82
MDC1-206ENST00000489540 DEFB105AQ8NG35 78 aa9.95□□□□□ -0.82
MDC1-206ENST00000489540 C9orf118A6NHY6 69 aa9.94□□□□□ -0.82
MDC1-206ENST00000489540 RETNLBQ9BQ08 111 aa9.94□□□□□ -0.82
MDC1-206ENST00000489540 LPAP08519 4548 aa9.92□□□□□ -0.82
MDC1-206ENST00000489540 RPS29P62273 56 aaKnown RBP9.92□□□□□ -0.82
MDC1-206ENST00000489540 GTF2H5Q6ZYL4 71 aa9.92□□□□□ -0.82
MDC1-206ENST00000489540 IGLV5-48A0A075B6I7 105 aa9.91□□□□□ -0.82
MDC1-206ENST00000489540 CFC1BP0CG36 223 aa9.91□□□□□ -0.82
MDC1-206ENST00000489540 CFC1P0CG37 223 aa9.91□□□□□ -0.82
MDC1-206ENST00000489540 LINC00575Q6W349 94 aa9.91□□□□□ -0.82
MDC1-206ENST00000489540 RAB37Q96AX2 223 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms