RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 GIG44P09565 113 aaPredicted RBP10.86□□□□□ -0.67
MCF2L-229ENST00000488765 CYSRT1A8MQ03 144 aa10.85□□□□□ -0.67
MCF2L-229ENST00000488765 CD164Q04900 197 aa10.85□□□□□ -0.67
MCF2L-229ENST00000488765 C9orf66Q5T8R8 295 aa10.85□□□□□ -0.67
MCF2L-229ENST00000488765 NBEAL1Q6ZS30 2694 aa10.84□□□□□ -0.67
MCF2L-229ENST00000488765 ZNF73O43830 326 aaPredicted RBP10.83□□□□□ -0.68
MCF2L-229ENST00000488765 PDE6GP18545 87 aa10.83□□□□□ -0.68
MCF2L-229ENST00000488765 HIGD2BQ4VC39 106 aa10.83□□□□□ -0.68
MCF2L-229ENST00000488765 SPAG11BQ08648 103 aa10.83□□□□□ -0.68
MCF2L-229ENST00000488765 Q6ZRU5 148 aa10.83□□□□□ -0.68
MCF2L-229ENST00000488765 COX7BP24311 80 aa10.82□□□□□ -0.68
MCF2L-229ENST00000488765 BAHCC1Q9P281 2608 aa10.82□□□□□ -0.68
MCF2L-229ENST00000488765 REG3AQ06141 175 aa10.81□□□□□ -0.68
MCF2L-229ENST00000488765 ST20-AS1Q8NBB2 130 aa10.8□□□□□ -0.68
MCF2L-229ENST00000488765 IGLV6-57P01721 117 aa10.8□□□□□ -0.68
MCF2L-229ENST00000488765 FBN1P35555 2871 aaKnown RBP10.79□□□□□ -0.68
MCF2L-229ENST00000488765 CHKB-CPT1BH3BT56 60 aa10.79□□□□□ -0.68
MCF2L-229ENST00000488765 C16orf74Q96GX8 76 aa10.79□□□□□ -0.68
MCF2L-229ENST00000488765 COL6A5A8TX70 2615 aa10.78□□□□□ -0.68
MCF2L-229ENST00000488765 KMT2BQ9UMN6 2715 aaPredicted RBP10.78□□□□□ -0.68
MCF2L-229ENST00000488765 INAFM1C9JVW0 142 aa10.78□□□□□ -0.68
MCF2L-229ENST00000488765 COX17Q14061 63 aa10.78□□□□□ -0.68
MCF2L-229ENST00000488765 SYCNQ0VAF6 134 aa10.77□□□□□ -0.68
MCF2L-229ENST00000488765 A0A0G2JQZ4 141 aa10.77□□□□□ -0.69
MCF2L-229ENST00000488765 A0A1W2PNN7 141 aa10.77□□□□□ -0.69
MCF2L-229ENST00000488765 MRPL55Q7Z7F7 128 aaKnown RBP10.77□□□□□ -0.69
MCF2L-229ENST00000488765 HTN3P15516 51 aa10.76□□□□□ -0.69
MCF2L-229ENST00000488765 KRTAP1-1Q07627 177 aa10.76□□□□□ -0.69
MCF2L-229ENST00000488765 PKD1L1Q8TDX9 2849 aa10.76□□□□□ -0.69
MCF2L-229ENST00000488765 ERC2-IT1O76042 136 aa10.76□□□□□ -0.69
MCF2L-229ENST00000488765 Q1T7F1 81 aa10.76□□□□□ -0.69
MCF2L-229ENST00000488765 ANK3Q12955 4377 aaKnown RBP10.75□□□□□ -0.69
MCF2L-229ENST00000488765 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.74□□□□□ -0.69
MCF2L-229ENST00000488765 RBM12B-AS1Q9P1G2 102 aa10.73□□□□□ -0.69
MCF2L-229ENST00000488765 PSCAO43653 123 aa10.71□□□□□ -0.69
MCF2L-229ENST00000488765 C6orf48Q9UBA6 75 aa10.7□□□□□ -0.7
MCF2L-229ENST00000488765 WFDC13Q8IUB5 93 aa10.7□□□□□ -0.7
MCF2L-229ENST00000488765 A0A1B0GUV1 79 aa10.69□□□□□ -0.7
MCF2L-229ENST00000488765 K7EQZ3 153 aa10.69□□□□□ -0.7
MCF2L-229ENST00000488765 ELOF1P60002 83 aaKnown RBP10.69□□□□□ -0.7
MCF2L-229ENST00000488765 PRR15LQ9BU68 103 aa10.69□□□□□ -0.7
MCF2L-229ENST00000488765 Q5VV11 94 aa10.69□□□□□ -0.7
MCF2L-229ENST00000488765 C16orf90A8MZG2 172 aa10.68□□□□□ -0.7
MCF2L-229ENST00000488765 KRTAP10-3P60369 221 aa10.67□□□□□ -0.7
MCF2L-229ENST00000488765 MGAM2Q2M2H8 2515 aa10.67□□□□□ -0.7
MCF2L-229ENST00000488765 CSMD3Q7Z407 3707 aa10.66□□□□□ -0.7
MCF2L-229ENST00000488765 WFDC10BQ8IUB3 73 aa10.66□□□□□ -0.7
MCF2L-229ENST00000488765 SRRM2Q9UQ35 2752 aaKnown RBP10.66□□□□□ -0.7
MCF2L-229ENST00000488765 A0A0J9YWU9 116 aa10.66□□□□□ -0.7
MCF2L-229ENST00000488765 CSNK1G2-AS1Q8NCQ2 148 aa10.65□□□□□ -0.7
MCF2L-229ENST00000488765 HCG22E2RYF7 251 aa10.65□□□□□ -0.71
MCF2L-229ENST00000488765 KPRPQ5T749 579 aaPredicted RBP10.64□□□□□ -0.71
MCF2L-229ENST00000488765 LINC00208Q96KT6 92 aa10.64□□□□□ -0.71
MCF2L-229ENST00000488765 ETDCA0A1B0GVM5 59 aa10.63□□□□□ -0.71
MCF2L-229ENST00000488765 PRO0255Q9UI72 69 aa10.63□□□□□ -0.71
MCF2L-229ENST00000488765 A6NED7 52 aa10.62□□□□□ -0.71
MCF2L-229ENST00000488765 RPL37AP8A6NKH3 93 aa10.62□□□□□ -0.71
MCF2L-229ENST00000488765 C11orf45Q8TAV5 145 aa10.62□□□□□ -0.71
MCF2L-229ENST00000488765 M0R378 163 aa10.62□□□□□ -0.71
MCF2L-229ENST00000488765 DEFB135Q30KP9 77 aa10.62□□□□□ -0.71
MCF2L-229ENST00000488765 A0A1W2PNM2 257 aa10.62□□□□□ -0.71
MCF2L-229ENST00000488765 Q8N377 158 aa10.62□□□□□ -0.71
MCF2L-229ENST00000488765 IGLV1-51P01701 117 aa10.61□□□□□ -0.71
MCF2L-229ENST00000488765 UBE2BP63146 152 aa10.61□□□□□ -0.71
MCF2L-229ENST00000488765 CAMK2N2Q96S95 79 aa10.61□□□□□ -0.71
MCF2L-229ENST00000488765 IGHV4-30-4P0DP06 118 aa10.61□□□□□ -0.71
MCF2L-229ENST00000488765 C4orf48Q5BLP8 95 aa10.61□□□□□ -0.71
MCF2L-229ENST00000488765 LINC00528Q8N1L1 170 aa10.61□□□□□ -0.71
MCF2L-229ENST00000488765 LINC00588Q9Y4M8 146 aa10.6□□□□□ -0.71
MCF2L-229ENST00000488765 DSCR10P59022 87 aa10.59□□□□□ -0.71
MCF2L-229ENST00000488765 LCA10Q71F78 164 aa10.59□□□□□ -0.71
MCF2L-229ENST00000488765 VPREB1P12018 145 aa10.58□□□□□ -0.72
MCF2L-229ENST00000488765 KTN1-AS1Q86SY8 53 aa10.58□□□□□ -0.72
MCF2L-229ENST00000488765 RPL37AP61513 92 aaKnown RBP10.57□□□□□ -0.72
MCF2L-229ENST00000488765 B9D2Q9BPU9 175 aa10.57□□□□□ -0.72
MCF2L-229ENST00000488765 C1orf137Q5JT78 98 aa10.57□□□□□ -0.72
MCF2L-229ENST00000488765 ZCCHC13Q8WW36 166 aaKnown RBP10.57□□□□□ -0.72
MCF2L-229ENST00000488765 C19orf73Q9NVV2 129 aa10.56□□□□□ -0.72
MCF2L-229ENST00000488765 Q8N9P0 234 aaPredicted RBP10.54□□□□□ -0.72
MCF2L-229ENST00000488765 H3BQ85 93 aa10.53□□□□□ -0.72
MCF2L-229ENST00000488765 UBE2AP49459 152 aa10.53□□□□□ -0.72
MCF2L-229ENST00000488765 TENM3Q9P273 2699 aa10.52□□□□□ -0.72
MCF2L-229ENST00000488765 OXLD1Q5BKU9 147 aa10.5□□□□□ -0.73
MCF2L-229ENST00000488765 MP68P56378 58 aa10.48□□□□□ -0.73
MCF2L-229ENST00000488765 C7orf33Q8WU49 177 aa10.48□□□□□ -0.73
MCF2L-229ENST00000488765 APOC4P55056 127 aa10.48□□□□□ -0.73
MCF2L-229ENST00000488765 SERTAD4-AS1Q5TG53 156 aa10.48□□□□□ -0.73
MCF2L-229ENST00000488765 NKAPP1Q8N9T2 125 aa10.47□□□□□ -0.73
MCF2L-229ENST00000488765 LCE6AA0A183 80 aa10.47□□□□□ -0.73
MCF2L-229ENST00000488765 SPAG11AQ6PDA7 123 aa10.47□□□□□ -0.73
MCF2L-229ENST00000488765 CYP4F30PQ9H0H9 118 aa10.46□□□□□ -0.73
MCF2L-229ENST00000488765 X6R8D5 127 aa10.46□□□□□ -0.73
MCF2L-229ENST00000488765 FAM168BA1KXE4 195 aa10.46□□□□□ -0.74
MCF2L-229ENST00000488765 COL7A1Q02388 2944 aa10.44□□□□□ -0.74
MCF2L-229ENST00000488765 CMC4P56277 68 aaPredicted RBP10.44□□□□□ -0.74
MCF2L-229ENST00000488765 PCOTHQ58A44 107 aa10.44□□□□□ -0.74
MCF2L-229ENST00000488765 Q9BRP9 147 aa10.43□□□□□ -0.74
MCF2L-229ENST00000488765 PRAC1Q96KF2 57 aa10.43□□□□□ -0.74
MCF2L-229ENST00000488765 IGLV5-48A0A075B6I7 105 aa10.43□□□□□ -0.74
MCF2L-229ENST00000488765 Q8NBF4 154 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms