RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 ATP6V1G2O95670 118 aa0.98□□□□□ -2.25
ITGB1-214ENST00000488427 C7orf65Q6ZTY9 151 aa0.98□□□□□ -2.25
ITGB1-214ENST00000488427 Q96NJ1 140 aa0.98□□□□□ -2.25
ITGB1-214ENST00000488427 AP1S3Q96PC3 154 aa0.98□□□□□ -2.25
ITGB1-214ENST00000488427 NIT2Q9NQR4 276 aa0.98□□□□□ -2.25
ITGB1-214ENST00000488427 OTORQ9NRC9 128 aa0.98□□□□□ -2.25
ITGB1-214ENST00000488427 ANAPC10Q9UM13 185 aa0.98□□□□□ -2.25
ITGB1-214ENST00000488427 SNURFQ9Y675 71 aa0.98□□□□□ -2.25
ITGB1-214ENST00000488427 H0YAA0 97 aa0.97□□□□□ -2.25
ITGB1-214ENST00000488427 PET100P0DJ07 73 aa0.97□□□□□ -2.25
ITGB1-214ENST00000488427 GNG5P63218 68 aa0.97□□□□□ -2.25
ITGB1-214ENST00000488427 UBE2L3P68036 154 aaKnown RBP0.97□□□□□ -2.25
ITGB1-214ENST00000488427 NDUFA5Q16718 116 aa0.97□□□□□ -2.25
ITGB1-214ENST00000488427 Q1T7F1 81 aa0.97□□□□□ -2.25
ITGB1-214ENST00000488427 SPANXN1Q5VSR9 72 aa0.97□□□□□ -2.25
ITGB1-214ENST00000488427 Q5XG85 94 aa0.97□□□□□ -2.25
ITGB1-214ENST00000488427 OR10AG1Q8NH19 301 aa0.97□□□□□ -2.25
ITGB1-214ENST00000488427 AP3S1Q92572 193 aa0.97□□□□□ -2.25
ITGB1-214ENST00000488427 FAM167A-AS1Q96KT0 104 aa0.97□□□□□ -2.25
ITGB1-214ENST00000488427 TRAV1-2A0A0B4J238 106 aa0.96□□□□□ -2.26
ITGB1-214ENST00000488427 METTL15P1P0C7V9 234 aa0.96□□□□□ -2.26
ITGB1-214ENST00000488427 SLC25A6P12236 298 aa0.96□□□□□ -2.26
ITGB1-214ENST00000488427 CKS1BP61024 79 aa0.96□□□□□ -2.26
ITGB1-214ENST00000488427 SAPCD1Q5SSQ6 148 aa0.96□□□□□ -2.26
ITGB1-214ENST00000488427 SOSTDC1Q6X4U4 206 aa0.96□□□□□ -2.26
ITGB1-214ENST00000488427 MIR17HGQ75NE6 70 aa0.96□□□□□ -2.26
ITGB1-214ENST00000488427 PSENENQ9NZ42 101 aa0.96□□□□□ -2.26
ITGB1-214ENST00000488427 TCRBV3S1A0A5B6 114 aa0.95□□□□□ -2.26
ITGB1-214ENST00000488427 DEFA1P59665 94 aa0.95□□□□□ -2.26
ITGB1-214ENST00000488427 RAB14P61106 215 aa0.95□□□□□ -2.26
ITGB1-214ENST00000488427 GGACTQ9BVM4 153 aa0.95□□□□□ -2.26
ITGB1-214ENST00000488427 TGIF2-C20orf24A0A0A6YYL0 155 aa0.94□□□□□ -2.26
ITGB1-214ENST00000488427 PIGBOS1A0A0B4J2F0 54 aa0.94□□□□□ -2.26
ITGB1-214ENST00000488427 LOC100130705A0A1B0GUX0 176 aa0.94□□□□□ -2.26
ITGB1-214ENST00000488427 ETDCA0A1B0GVM5 59 aa0.94□□□□□ -2.26
ITGB1-214ENST00000488427 TCL1BO95988 128 aa0.94□□□□□ -2.26
ITGB1-214ENST00000488427 MT1GP13640 62 aa0.94□□□□□ -2.26
ITGB1-214ENST00000488427 RNASE10Q5GAN6 216 aaKnown RBP0.94□□□□□ -2.26
ITGB1-214ENST00000488427 TOMM7Q9P0U1 55 aa0.94□□□□□ -2.26
ITGB1-214ENST00000488427 C7orf77A4D0Y5 90 aa0.93□□□□□ -2.26
ITGB1-214ENST00000488427 PHGR1C9JFL3 82 aa0.93□□□□□ -2.26
ITGB1-214ENST00000488427 H3BT86 120 aa0.93□□□□□ -2.26
ITGB1-214ENST00000488427 SSSCA1O60232 199 aa0.93□□□□□ -2.26
ITGB1-214ENST00000488427 TRGC1P0CF51 173 aa0.93□□□□□ -2.26
ITGB1-214ENST00000488427 AP3S2P59780 193 aa0.93□□□□□ -2.26
ITGB1-214ENST00000488427 C4orf26Q17RF5 130 aa0.93□□□□□ -2.26
ITGB1-214ENST00000488427 SCGB2B2Q4G0G5 96 aa0.93□□□□□ -2.26
ITGB1-214ENST00000488427 TMEM14EPQ6UXP3 125 aa0.93□□□□□ -2.26
ITGB1-214ENST00000488427 Q6ZUT4 128 aa0.93□□□□□ -2.26
ITGB1-214ENST00000488427 OR5H6Q8NGV6 325 aa0.93□□□□□ -2.26
ITGB1-214ENST00000488427 TTTY13Q9BZ97 58 aa0.93□□□□□ -2.26
ITGB1-214ENST00000488427 UBE2L5PA0A1B0GUS4 154 aa0.92□□□□□ -2.26
ITGB1-214ENST00000488427 F8VRH5 84 aa0.92□□□□□ -2.26
ITGB1-214ENST00000488427 I3L3M4 83 aa0.92□□□□□ -2.26
ITGB1-214ENST00000488427 MT1EP04732 61 aa0.92□□□□□ -2.26
ITGB1-214ENST00000488427 AQP4P55087 323 aa0.92□□□□□ -2.26
ITGB1-214ENST00000488427 KLKP1Q107X0 134 aa0.92□□□□□ -2.26
ITGB1-214ENST00000488427 KHDC3LQ587J8 217 aa0.92□□□□□ -2.26
ITGB1-214ENST00000488427 MT1MQ8N339 61 aa0.92□□□□□ -2.26
ITGB1-214ENST00000488427 C5orf17Q8NAS9 161 aa0.92□□□□□ -2.26
ITGB1-214ENST00000488427 S100A16Q96FQ6 103 aaKnown RBP0.92□□□□□ -2.26
ITGB1-214ENST00000488427 ATP6V1G3Q96LB4 118 aa0.92□□□□□ -2.26
ITGB1-214ENST00000488427 NAT8Q9UHE5 227 aa0.92□□□□□ -2.26
ITGB1-214ENST00000488427 LSM2Q9Y333 95 aaKnown RBP0.92□□□□□ -2.26
ITGB1-214ENST00000488427 TRAV9-1A0A075B6T8 112 aa0.91□□□□□ -2.26
ITGB1-214ENST00000488427 IFNA1P01562 189 aa0.91□□□□□ -2.26
ITGB1-214ENST00000488427 CXCL1P09341 107 aa0.91□□□□□ -2.26
ITGB1-214ENST00000488427 CRIP1P50238 77 aa0.91□□□□□ -2.26
ITGB1-214ENST00000488427 ALKAL2Q6UX46 152 aa0.91□□□□□ -2.26
ITGB1-214ENST00000488427 LCA10Q71F78 164 aa0.91□□□□□ -2.26
ITGB1-214ENST00000488427 WFDC13Q8IUB5 93 aa0.91□□□□□ -2.26
ITGB1-214ENST00000488427 PRR15Q8IV56 129 aa0.91□□□□□ -2.26
ITGB1-214ENST00000488427 PLAC4Q8WY50 150 aa0.91□□□□□ -2.26
ITGB1-214ENST00000488427 MRPS26Q9BYN8 205 aaKnown RBP0.91□□□□□ -2.26
ITGB1-214ENST00000488427 GSKIPQ9P0R6 139 aa0.91□□□□□ -2.26
ITGB1-214ENST00000488427 HPGDSO60760 199 aa0.9□□□□□ -2.27
ITGB1-214ENST00000488427 CD3DP04234 171 aa0.9□□□□□ -2.27
ITGB1-214ENST00000488427 CDC34P49427 236 aaPredicted RBP0.9□□□□□ -2.27
ITGB1-214ENST00000488427 MLLT11Q13015 90 aaPredicted RBP0.9□□□□□ -2.27
ITGB1-214ENST00000488427 JOSD1Q15040 202 aaPredicted RBP0.9□□□□□ -2.27
ITGB1-214ENST00000488427 BATFQ16520 125 aa0.9□□□□□ -2.27
ITGB1-214ENST00000488427 KRTAP19-7Q3SYF9 63 aa0.9□□□□□ -2.27
ITGB1-214ENST00000488427 H1FX-AS1Q4G0G2 97 aa0.9□□□□□ -2.27
ITGB1-214ENST00000488427 SLC51BQ86UW2 128 aa0.9□□□□□ -2.27
ITGB1-214ENST00000488427 Q8IZM0 81 aa0.9□□□□□ -2.27
ITGB1-214ENST00000488427 RPL39LQ96EH5 51 aaKnown RBP0.9□□□□□ -2.27
ITGB1-214ENST00000488427 PRO1933Q9H354 126 aa0.9□□□□□ -2.27
ITGB1-214ENST00000488427 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
ITGB1-214ENST00000488427 DISC1C4P0D8 188 aa0.89□□□□□ -2.27
ITGB1-214ENST00000488427 PPBPP02775 128 aa0.89□□□□□ -2.27
ITGB1-214ENST00000488427 SPRR1AP35321 89 aa0.89□□□□□ -2.27
ITGB1-214ENST00000488427 FXYD2P54710 66 aa0.89□□□□□ -2.27
ITGB1-214ENST00000488427 NDUFA6P56556 154 aa0.89□□□□□ -2.27
ITGB1-214ENST00000488427 RAB5BP61020 215 aa0.89□□□□□ -2.27
ITGB1-214ENST00000488427 HBBP68871 147 aa0.89□□□□□ -2.27
ITGB1-214ENST00000488427 SNX29P2Q8IUI4 249 aa0.89□□□□□ -2.27
ITGB1-214ENST00000488427 BOD1L2Q8IYS8 172 aa0.89□□□□□ -2.27
ITGB1-214ENST00000488427 NPCDR1Q9BY65 106 aa0.89□□□□□ -2.27
ITGB1-214ENST00000488427 RNASE7Q9H1E1 156 aaKnown RBP0.89□□□□□ -2.27
ITGB1-214ENST00000488427 LAMTOR3Q9UHA4 124 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms