RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 FLGP20930 4061 aaPredicted RBP-0.52□□□□□ -2.49
R3HDM1-219ENST00000488035 TCHHQ07283 1943 aa-0.52□□□□□ -2.49
R3HDM1-219ENST00000488035 LRRC7Q96NW7 1537 aa-0.52□□□□□ -2.49
R3HDM1-219ENST00000488035 M0R143 59 aa-0.52□□□□□ -2.49
R3HDM1-219ENST00000488035 C3orf79P0CE67 100 aa-0.52□□□□□ -2.49
R3HDM1-219ENST00000488035 RBP2P50120 134 aa-0.52□□□□□ -2.49
R3HDM1-219ENST00000488035 COX6B2Q6YFQ2 88 aa-0.52□□□□□ -2.49
R3HDM1-219ENST00000488035 C20orf78Q9BR46 151 aa-0.52□□□□□ -2.49
R3HDM1-219ENST00000488035 DOPEY1Q5JWR5 2465 aa-0.52□□□□□ -2.49
R3HDM1-219ENST00000488035 COL14A1Q05707 1796 aaKnown RBP-0.52□□□□□ -2.49
R3HDM1-219ENST00000488035 EIF4G3O43432 1585 aaKnown RBP-0.53□□□□□ -2.49
R3HDM1-219ENST00000488035 LRRC9Q6ZRR7 1453 aa-0.53□□□□□ -2.49
R3HDM1-219ENST00000488035 DEFB130BP0DP73 79 aa-0.53□□□□□ -2.49
R3HDM1-219ENST00000488035 DEFB130AP0DP74 79 aa-0.53□□□□□ -2.49
R3HDM1-219ENST00000488035 TNRC18O15417 2968 aaPredicted RBP-0.53□□□□□ -2.49
R3HDM1-219ENST00000488035 MON2Q7Z3U7 1717 aa-0.53□□□□□ -2.49
R3HDM1-219ENST00000488035 C5P01031 1676 aa-0.53□□□□□ -2.49
R3HDM1-219ENST00000488035 ITPR3Q14573 2671 aa-0.53□□□□□ -2.49
R3HDM1-219ENST00000488035 MYO18BQ8IUG5 2567 aa-0.53□□□□□ -2.5
R3HDM1-219ENST00000488035 PKHD1P08F94 4074 aa-0.54□□□□□ -2.5
R3HDM1-219ENST00000488035 ZFYVE16Q7Z3T8 1539 aa-0.54□□□□□ -2.5
R3HDM1-219ENST00000488035 CNTLNQ9NXG0 1405 aa-0.54□□□□□ -2.5
R3HDM1-219ENST00000488035 MYMXA0A1B0GTQ4 84 aa-0.54□□□□□ -2.5
R3HDM1-219ENST00000488035 IFI6P09912 130 aa-0.54□□□□□ -2.5
R3HDM1-219ENST00000488035 DEFB106AQ8N104 65 aa-0.54□□□□□ -2.5
R3HDM1-219ENST00000488035 ACBD7Q8N6N7 88 aa-0.54□□□□□ -2.5
R3HDM1-219ENST00000488035 TOPAZ1Q8N9V7 1692 aa-0.54□□□□□ -2.5
R3HDM1-219ENST00000488035 ZFHX3Q15911 3703 aa-0.54□□□□□ -2.5
R3HDM1-219ENST00000488035 MGAM2Q2M2H8 2515 aa-0.55□□□□□ -2.5
R3HDM1-219ENST00000488035 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.55□□□□□ -2.5
R3HDM1-219ENST00000488035 ACACAQ13085 2346 aa-0.55□□□□□ -2.5
R3HDM1-219ENST00000488035 GYPAP02724 150 aa-0.55□□□□□ -2.5
R3HDM1-219ENST00000488035 IFI27P40305 119 aaPredicted RBP-0.55□□□□□ -2.5
R3HDM1-219ENST00000488035 PRLHP81277 87 aa-0.55□□□□□ -2.5
R3HDM1-219ENST00000488035 Q9H521 79 aa-0.55□□□□□ -2.5
R3HDM1-219ENST00000488035 MTORP42345 2549 aa-0.55□□□□□ -2.5
R3HDM1-219ENST00000488035 UBR3Q6ZT12 1888 aa-0.55□□□□□ -2.5
R3HDM1-219ENST00000488035 NEXMIFQ5QGS0 1516 aa-0.55□□□□□ -2.5
R3HDM1-219ENST00000488035 RGPD2P0DJD1 1756 aa-0.55□□□□□ -2.5
R3HDM1-219ENST00000488035 BCORQ6W2J9 1755 aa-0.55□□□□□ -2.5
R3HDM1-219ENST00000488035 FYCO1Q9BQS8 1478 aa-0.55□□□□□ -2.5
R3HDM1-219ENST00000488035 TRANK1O15050 2925 aa-0.55□□□□□ -2.5
R3HDM1-219ENST00000488035 CHD1O14646 1710 aa-0.55□□□□□ -2.5
R3HDM1-219ENST00000488035 SHPRHQ149N8 1683 aa-0.56□□□□□ -2.5
R3HDM1-219ENST00000488035 CCNB3Q8WWL7 1395 aa-0.56□□□□□ -2.5
R3HDM1-219ENST00000488035 DMXL1Q9Y485 3027 aa-0.56□□□□□ -2.5
R3HDM1-219ENST00000488035 TEP1Q99973 2627 aaKnown RBP-0.56□□□□□ -2.5
R3HDM1-219ENST00000488035 CEBPZOSA8MTT3 80 aa-0.56□□□□□ -2.5
R3HDM1-219ENST00000488035 IAPPP10997 89 aa-0.56□□□□□ -2.5
R3HDM1-219ENST00000488035 S100A16Q96FQ6 103 aaKnown RBP-0.56□□□□□ -2.5
R3HDM1-219ENST00000488035 SNHG12Q9BXW3 62 aa-0.56□□□□□ -2.5
R3HDM1-219ENST00000488035 TEX14Q8IWB6 1497 aa-0.56□□□□□ -2.5
R3HDM1-219ENST00000488035 ANKRD36A6QL64 1941 aa-0.56□□□□□ -2.5
R3HDM1-219ENST00000488035 UTP20O75691 2785 aaKnown RBP-0.57□□□□□ -2.5
R3HDM1-219ENST00000488035 PRKDCP78527 4128 aaKnown RBP-0.57□□□□□ -2.5
R3HDM1-219ENST00000488035 PLIN4Q96Q06 1357 aa-0.57□□□□□ -2.5
R3HDM1-219ENST00000488035 ANKRD11Q6UB99 2663 aaPredicted RBP-0.57□□□□□ -2.5
R3HDM1-219ENST00000488035 ABCA3Q99758 1704 aa-0.57□□□□□ -2.5
R3HDM1-219ENST00000488035 UMAD1C9J7I0 102 aa-0.57□□□□□ -2.5
R3HDM1-219ENST00000488035 H0YAA0 97 aa-0.57□□□□□ -2.5
R3HDM1-219ENST00000488035 K7EP34 96 aa-0.57□□□□□ -2.5
R3HDM1-219ENST00000488035 DEFB1P60022 68 aa-0.57□□□□□ -2.5
R3HDM1-219ENST00000488035 ALKQ9UM73 1620 aa-0.57□□□□□ -2.5
R3HDM1-219ENST00000488035 GCN1Q92616 2671 aaKnown RBP-0.58□□□□□ -2.5
R3HDM1-219ENST00000488035 CCDC168Q8NDH2 2452 aa-0.58□□□□□ -2.5
R3HDM1-219ENST00000488035 STARD9Q9P2P6 4700 aa-0.58□□□□□ -2.5
R3HDM1-219ENST00000488035 PREX1Q8TCU6 1659 aa-0.58□□□□□ -2.5
R3HDM1-219ENST00000488035 ATP10BO94823 1461 aa-0.58□□□□□ -2.5
R3HDM1-219ENST00000488035 ATP7BP35670 1465 aa-0.58□□□□□ -2.5
R3HDM1-219ENST00000488035 KIF20BQ96Q89 1820 aa-0.58□□□□□ -2.5
R3HDM1-219ENST00000488035 NDUFA4O00483 81 aa-0.58□□□□□ -2.5
R3HDM1-219ENST00000488035 NDUFB1O75438 58 aa-0.58□□□□□ -2.5
R3HDM1-219ENST00000488035 LINC00643Q86TS7 51 aa-0.58□□□□□ -2.5
R3HDM1-219ENST00000488035 EPPK1P58107 5090 aaKnown RBP-0.58□□□□□ -2.5
R3HDM1-219ENST00000488035 KIAA1551Q9HCM1 1747 aa-0.58□□□□□ -2.5
R3HDM1-219ENST00000488035 MAP3K1Q13233 1512 aa-0.59□□□□□ -2.5
R3HDM1-219ENST00000488035 NCOA2Q15596 1464 aa-0.59□□□□□ -2.5
R3HDM1-219ENST00000488035 SCN11AQ9UI33 1791 aa-0.59□□□□□ -2.5
R3HDM1-219ENST00000488035 A0A087WXM4 84 aa-0.59□□□□□ -2.5
R3HDM1-219ENST00000488035 PKIAP61925 76 aa-0.59□□□□□ -2.5
R3HDM1-219ENST00000488035 SNRPFP62306 86 aaKnown RBP-0.59□□□□□ -2.5
R3HDM1-219ENST00000488035 C4AP0C0L4 1744 aa-0.59□□□□□ -2.5
R3HDM1-219ENST00000488035 C4BP0C0L5 1744 aa-0.59□□□□□ -2.5
R3HDM1-219ENST00000488035 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.59□□□□□ -2.5
R3HDM1-219ENST00000488035 LRRK2Q5S007 2527 aa-0.6□□□□□ -2.5
R3HDM1-219ENST00000488035 ABCC10Q5T3U5 1492 aa-0.6□□□□□ -2.5
R3HDM1-219ENST00000488035 CRYBG1Q9Y4K1 1723 aa-0.6□□□□□ -2.51
R3HDM1-219ENST00000488035 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.6□□□□□ -2.51
R3HDM1-219ENST00000488035 PYY3Q5JQD4 70 aa-0.6□□□□□ -2.51
R3HDM1-219ENST00000488035 LAMA1P25391 3075 aa-0.6□□□□□ -2.51
R3HDM1-219ENST00000488035 USP32Q8NFA0 1604 aa-0.6□□□□□ -2.51
R3HDM1-219ENST00000488035 REV3LO60673 3130 aa-0.61□□□□□ -2.51
R3HDM1-219ENST00000488035 CLTCQ00610 1675 aaKnown RBP-0.61□□□□□ -2.51
R3HDM1-219ENST00000488035 MT1HP80294 61 aa-0.61□□□□□ -2.51
R3HDM1-219ENST00000488035 NREPQ16612 68 aa-0.61□□□□□ -2.51
R3HDM1-219ENST00000488035 EPRSP07814 1512 aaKnown RBP-0.61□□□□□ -2.51
R3HDM1-219ENST00000488035 RGPD1P0DJD0 1748 aa-0.61□□□□□ -2.51
R3HDM1-219ENST00000488035 RGPD8O14715 1765 aaPredicted RBP-0.62□□□□□ -2.51
R3HDM1-219ENST00000488035 RGPD5Q99666 1765 aa-0.62□□□□□ -2.51
R3HDM1-219ENST00000488035 PKD1L2Q7Z442 2459 aa-0.62□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 273.7 ms