RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 C7orf65Q6ZTY9 151 aa1.48□□□□□ -2.17
USP48-209ENST00000487880 COA5Q86WW8 74 aa1.48□□□□□ -2.17
USP48-209ENST00000487880 COX7B2Q8TF08 81 aa1.48□□□□□ -2.17
USP48-209ENST00000487880 CDC42SE2Q9NRR3 84 aa1.48□□□□□ -2.17
USP48-209ENST00000487880 CDC42SE1Q9NRR8 79 aa1.48□□□□□ -2.17
USP48-209ENST00000487880 CADP27708 2225 aa1.47□□□□□ -2.17
USP48-209ENST00000487880 A6NN06 94 aa1.47□□□□□ -2.17
USP48-209ENST00000487880 A8MUN3 132 aa1.47□□□□□ -2.17
USP48-209ENST00000487880 LINC00158P58513 81 aa1.47□□□□□ -2.17
USP48-209ENST00000487880 Q5VV11 94 aa1.47□□□□□ -2.17
USP48-209ENST00000487880 DEFB132Q7Z7B7 95 aa1.47□□□□□ -2.17
USP48-209ENST00000487880 Q8IZM0 81 aa1.47□□□□□ -2.17
USP48-209ENST00000487880 LINC00269Q8N2A0 174 aa1.47□□□□□ -2.17
USP48-209ENST00000487880 WFDC9Q8NEX5 89 aa1.47□□□□□ -2.17
USP48-209ENST00000487880 RHPN1-AS1Q9BWJ2 59 aa1.47□□□□□ -2.17
USP48-209ENST00000487880 POLEQ07864 2286 aa1.46□□□□□ -2.18
USP48-209ENST00000487880 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.46□□□□□ -2.18
USP48-209ENST00000487880 A0A096LNT2 108 aa1.46□□□□□ -2.18
USP48-209ENST00000487880 ETDCA0A1B0GVM5 59 aa1.46□□□□□ -2.18
USP48-209ENST00000487880 HCG22E2RYF7 251 aa1.46□□□□□ -2.18
USP48-209ENST00000487880 C19orf84I3L1E1 186 aa1.46□□□□□ -2.18
USP48-209ENST00000487880 PRB4P10163 310 aaPredicted RBP1.46□□□□□ -2.18
USP48-209ENST00000487880 KCNQ1DNQ9H478 68 aa1.46□□□□□ -2.18
USP48-209ENST00000487880 FAM186AA6NE01 2351 aa1.45□□□□□ -2.18
USP48-209ENST00000487880 PLCE1Q9P212 2302 aa1.45□□□□□ -2.18
USP48-209ENST00000487880 HTTP42858 3142 aa1.45□□□□□ -2.18
USP48-209ENST00000487880 URB1O60287 2271 aaKnown RBP1.45□□□□□ -2.18
USP48-209ENST00000487880 WNK2Q9Y3S1 2297 aa1.45□□□□□ -2.18
USP48-209ENST00000487880 ANGP03950 147 aaKnown RBP1.45□□□□□ -2.18
USP48-209ENST00000487880 C5orf56Q8N8D9 126 aa1.45□□□□□ -2.18
USP48-209ENST00000487880 KIAA0100Q14667 2235 aaKnown RBP1.45□□□□□ -2.18
USP48-209ENST00000487880 COL6A6A6NMZ7 2263 aa1.45□□□□□ -2.18
USP48-209ENST00000487880 WDR87Q6ZQQ6 2873 aa1.44□□□□□ -2.18
USP48-209ENST00000487880 IGLV5-48A0A075B6I7 105 aa1.44□□□□□ -2.18
USP48-209ENST00000487880 G3V318 75 aa1.44□□□□□ -2.18
USP48-209ENST00000487880 CHKB-CPT1BH3BT56 60 aa1.44□□□□□ -2.18
USP48-209ENST00000487880 PRM2P04554 102 aa1.44□□□□□ -2.18
USP48-209ENST00000487880 CNBPP62633 177 aaKnown RBP1.44□□□□□ -2.18
USP48-209ENST00000487880 C9orf116Q5BN46 136 aaPredicted RBP1.44□□□□□ -2.18
USP48-209ENST00000487880 LINC00208Q96KT6 92 aa1.44□□□□□ -2.18
USP48-209ENST00000487880 CHD7Q9P2D1 2997 aa1.44□□□□□ -2.18
USP48-209ENST00000487880 LINC01558Q9Y6Z2 57 aa1.44□□□□□ -2.18
USP48-209ENST00000487880 RANBP2P49792 3224 aaKnown RBP1.44□□□□□ -2.18
USP48-209ENST00000487880 PKD1L2Q7Z442 2459 aa1.44□□□□□ -2.18
USP48-209ENST00000487880 ABCA4P78363 2273 aa1.43□□□□□ -2.18
USP48-209ENST00000487880 TRANK1O15050 2925 aa1.43□□□□□ -2.18
USP48-209ENST00000487880 TNRC18O15417 2968 aaPredicted RBP1.43□□□□□ -2.18
USP48-209ENST00000487880 GVQW2A0A096LPI5 108 aaPredicted RBP1.43□□□□□ -2.18
USP48-209ENST00000487880 LINC00959A0A1B0GUT2 108 aa1.43□□□□□ -2.18
USP48-209ENST00000487880 M0R2N4 97 aa1.43□□□□□ -2.18
USP48-209ENST00000487880 KRTAP10-4P60372 401 aaPredicted RBP1.43□□□□□ -2.18
USP48-209ENST00000487880 SPINK13Q1W4C9 94 aa1.43□□□□□ -2.18
USP48-209ENST00000487880 LINC01554Q52M75 96 aa1.43□□□□□ -2.18
USP48-209ENST00000487880 CASC2Q6XLA1 102 aa1.43□□□□□ -2.18
USP48-209ENST00000487880 Q6ZQY7 126 aa1.43□□□□□ -2.18
USP48-209ENST00000487880 FDCSPQ8NFU4 85 aa1.43□□□□□ -2.18
USP48-209ENST00000487880 DEFB104AQ8WTQ1 72 aa1.43□□□□□ -2.18
USP48-209ENST00000487880 SPRR4Q96PI1 79 aa1.43□□□□□ -2.18
USP48-209ENST00000487880 PLAC8Q9NZF1 115 aa1.43□□□□□ -2.18
USP48-209ENST00000487880 TOMM7Q9P0U1 55 aa1.43□□□□□ -2.18
USP48-209ENST00000487880 AHCTF1Q8WYP5 2266 aa1.43□□□□□ -2.18
USP48-209ENST00000487880 CHD9Q3L8U1 2897 aa1.43□□□□□ -2.18
USP48-209ENST00000487880 UNC80Q8N2C7 3258 aa1.42□□□□□ -2.18
USP48-209ENST00000487880 CACNA1BQ00975 2339 aa1.42□□□□□ -2.18
USP48-209ENST00000487880 DEFB1P60022 68 aa1.42□□□□□ -2.18
USP48-209ENST00000487880 SPTSSBQ8NFR3 76 aa1.42□□□□□ -2.18
USP48-209ENST00000487880 PRR15LQ9BU68 103 aa1.42□□□□□ -2.18
USP48-209ENST00000487880 UNC79Q9P2D8 2635 aa1.42□□□□□ -2.18
USP48-209ENST00000487880 NBEAQ8NFP9 2946 aa1.42□□□□□ -2.18
USP48-209ENST00000487880 UTRNP46939 3433 aa1.41□□□□□ -2.18
USP48-209ENST00000487880 COL6A3P12111 3177 aa1.41□□□□□ -2.18
USP48-209ENST00000487880 LYNX1P0DP58 116 aa1.41□□□□□ -2.18
USP48-209ENST00000487880 C9orf163Q8N9P6 203 aa1.41□□□□□ -2.18
USP48-209ENST00000487880 WFDC10AQ9H1F0 79 aa1.41□□□□□ -2.18
USP48-209ENST00000487880 PTPRQQ9UMZ3 2332 aa1.41□□□□□ -2.18
USP48-209ENST00000487880 ZZEF1O43149 2961 aa1.41□□□□□ -2.18
USP48-209ENST00000487880 DEFB131AP59861 70 aa1.4□□□□□ -2.19
USP48-209ENST00000487880 SPAG11BQ08648 103 aa1.4□□□□□ -2.19
USP48-209ENST00000487880 FRYQ5TBA9 3013 aa1.4□□□□□ -2.19
USP48-209ENST00000487880 ZFHX3Q15911 3703 aa1.4□□□□□ -2.19
USP48-209ENST00000487880 DOPEY2Q9Y3R5 2298 aa1.4□□□□□ -2.19
USP48-209ENST00000487880 IGKV3-7A0A075B6H7 116 aa1.39□□□□□ -2.19
USP48-209ENST00000487880 DEFB131BA0A096LNP1 70 aa1.39□□□□□ -2.19
USP48-209ENST00000487880 TRGV1A0A0A0MS02 117 aa1.39□□□□□ -2.19
USP48-209ENST00000487880 LYNX1G3V0Z9 82 aa1.39□□□□□ -2.19
USP48-209ENST00000487880 H3BUX3 64 aa1.39□□□□□ -2.19
USP48-209ENST00000487880 PRB3Q04118 309 aaPredicted RBP1.39□□□□□ -2.19
USP48-209ENST00000487880 RETNLBQ9BQ08 111 aa1.39□□□□□ -2.19
USP48-209ENST00000487880 TP53AIP1Q9HCN2 124 aa1.39□□□□□ -2.19
USP48-209ENST00000487880 LAMA2P24043 3122 aaKnown RBP1.39□□□□□ -2.19
USP48-209ENST00000487880 DNAH14Q0VDD8 3507 aa1.39□□□□□ -2.19
USP48-209ENST00000487880 VPS13AQ96RL7 3174 aa1.38□□□□□ -2.19
USP48-209ENST00000487880 H0Y9P7 68 aa1.38□□□□□ -2.19
USP48-209ENST00000487880 HTN1P15515 57 aa1.38□□□□□ -2.19
USP48-209ENST00000487880 C1orf137Q5JT78 98 aa1.38□□□□□ -2.19
USP48-209ENST00000487880 XAGE1AQ9HD64 81 aa1.38□□□□□ -2.19
USP48-209ENST00000487880 XIRP2A4UGR9 3374 aa1.38□□□□□ -2.19
USP48-209ENST00000487880 TPRP12270 2363 aaKnown RBP1.37□□□□□ -2.19
USP48-209ENST00000487880 SPTBN1Q01082 2364 aaKnown RBP1.37□□□□□ -2.19
USP48-209ENST00000487880 SZT2Q5T011 3432 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 357.3 ms