RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 UBE2D2P62837 147 aa1.74□□□□□ -2.13
PRPF38A-203ENST00000487160 SSBP1Q04837 148 aaKnown RBP1.74□□□□□ -2.13
PRPF38A-203ENST00000487160 C1orf137Q5JT78 98 aa1.74□□□□□ -2.13
PRPF38A-203ENST00000487160 FAM74A4Q5TZK3 123 aa1.74□□□□□ -2.13
PRPF38A-203ENST00000487160 MBD3L1Q8WWY6 194 aa1.74□□□□□ -2.13
PRPF38A-203ENST00000487160 DIRC1Q969H9 104 aa1.74□□□□□ -2.13
PRPF38A-203ENST00000487160 FAM167A-AS1Q96KT0 104 aa1.74□□□□□ -2.13
PRPF38A-203ENST00000487160 RETNLBQ9BQ08 111 aa1.74□□□□□ -2.13
PRPF38A-203ENST00000487160 CCDC32Q9BV29 185 aa1.74□□□□□ -2.13
PRPF38A-203ENST00000487160 MUC17Q685J3 4493 aa1.74□□□□□ -2.13
PRPF38A-203ENST00000487160 TRBV7-3A0A075B6L6 115 aa1.73□□□□□ -2.13
PRPF38A-203ENST00000487160 K7ERJ3 54 aa1.73□□□□□ -2.13
PRPF38A-203ENST00000487160 ROMO1P60602 79 aa1.73□□□□□ -2.13
PRPF38A-203ENST00000487160 S100A10P60903 97 aa1.73□□□□□ -2.13
PRPF38A-203ENST00000487160 PKIAP61925 76 aa1.73□□□□□ -2.13
PRPF38A-203ENST00000487160 NCS1P62166 190 aa1.73□□□□□ -2.13
PRPF38A-203ENST00000487160 FP248Q71RG6 208 aaPredicted RBP1.73□□□□□ -2.13
PRPF38A-203ENST00000487160 SMIM4Q8WVI0 70 aa1.73□□□□□ -2.13
PRPF38A-203ENST00000487160 HYLS1Q96M11 299 aa1.73□□□□□ -2.13
PRPF38A-203ENST00000487160 NAA38Q9BRA0 125 aaKnown RBP1.73□□□□□ -2.13
PRPF38A-203ENST00000487160 GGACTQ9BVM4 153 aa1.73□□□□□ -2.13
PRPF38A-203ENST00000487160 NMES1Q9C002 83 aa1.73□□□□□ -2.13
PRPF38A-203ENST00000487160 LINC00474Q9P2X8 69 aa1.73□□□□□ -2.13
PRPF38A-203ENST00000487160 SCP2D1Q9UJQ7 156 aa1.73□□□□□ -2.13
PRPF38A-203ENST00000487160 TRBV10-1A0A0K0K1A3 114 aa1.72□□□□□ -2.13
PRPF38A-203ENST00000487160 TRBV6-5A0A0K0K1A5 114 aa1.72□□□□□ -2.13
PRPF38A-203ENST00000487160 H3BVH4 76 aa1.72□□□□□ -2.13
PRPF38A-203ENST00000487160 TIMM17BO60830 172 aa1.72□□□□□ -2.13
PRPF38A-203ENST00000487160 CST7O76096 145 aa1.72□□□□□ -2.13
PRPF38A-203ENST00000487160 SFT2D2O95562 160 aa1.72□□□□□ -2.13
PRPF38A-203ENST00000487160 BAALC-AS2P0C853 105 aa1.72□□□□□ -2.13
PRPF38A-203ENST00000487160 BCL2P10415 239 aa1.72□□□□□ -2.13
PRPF38A-203ENST00000487160 FGF7P21781 194 aa1.72□□□□□ -2.13
PRPF38A-203ENST00000487160 S100A11P31949 105 aa1.72□□□□□ -2.13
PRPF38A-203ENST00000487160 UBE2L3P68036 154 aaKnown RBP1.72□□□□□ -2.13
PRPF38A-203ENST00000487160 MRPS10P82664 201 aaKnown RBP1.72□□□□□ -2.13
PRPF38A-203ENST00000487160 LINC00526Q96FQ7 95 aa1.72□□□□□ -2.13
PRPF38A-203ENST00000487160 KRTAP4-1Q9BYQ7 146 aa1.72□□□□□ -2.13
PRPF38A-203ENST00000487160 NHP2Q9NX24 153 aaKnown RBP1.72□□□□□ -2.13
PRPF38A-203ENST00000487160 LAMTOR3Q9UHA4 124 aa1.72□□□□□ -2.13
PRPF38A-203ENST00000487160 NAT8BQ9UHF3 227 aa1.72□□□□□ -2.13
PRPF38A-203ENST00000487160 TRBV25-1A0A075B6N4 114 aa1.71□□□□□ -2.14
PRPF38A-203ENST00000487160 GVQW2A0A096LPI5 108 aaPredicted RBP1.71□□□□□ -2.14
PRPF38A-203ENST00000487160 MT1HP80294 61 aa1.71□□□□□ -2.14
PRPF38A-203ENST00000487160 ZNF56Q15929 161 aa1.71□□□□□ -2.14
PRPF38A-203ENST00000487160 SLC25A21Q9BQT8 299 aaPredicted RBP1.71□□□□□ -2.14
PRPF38A-203ENST00000487160 BATF3Q9NR55 127 aa1.71□□□□□ -2.14
PRPF38A-203ENST00000487160 OR5AC2Q9NZP5 309 aa1.71□□□□□ -2.14
PRPF38A-203ENST00000487160 GSKIPQ9P0R6 139 aa1.71□□□□□ -2.14
PRPF38A-203ENST00000487160 HSPB11Q9Y547 144 aa1.71□□□□□ -2.14
PRPF38A-203ENST00000487160 IGHV1-24A0A0C4DH33 117 aa1.7□□□□□ -2.14
PRPF38A-203ENST00000487160 IGKV3OR2-268A0A0C4DH90 116 aa1.7□□□□□ -2.14
PRPF38A-203ENST00000487160 TRBV6-1A0A0K0K1D8 114 aa1.7□□□□□ -2.14
PRPF38A-203ENST00000487160 IGKV2-29A2NJV5 120 aaPredicted RBP1.7□□□□□ -2.14
PRPF38A-203ENST00000487160 C9orf170A2RU37 121 aa1.7□□□□□ -2.14
PRPF38A-203ENST00000487160 F8W036 122 aa1.7□□□□□ -2.14
PRPF38A-203ENST00000487160 RPS28P62857 69 aaKnown RBP1.7□□□□□ -2.14
PRPF38A-203ENST00000487160 HBBP68871 147 aa1.7□□□□□ -2.14
PRPF38A-203ENST00000487160 IQCJQ1A5X6 159 aa1.7□□□□□ -2.14
PRPF38A-203ENST00000487160 C9orf116Q5BN46 136 aaPredicted RBP1.7□□□□□ -2.14
PRPF38A-203ENST00000487160 FAM74A1Q5RGS3 127 aa1.7□□□□□ -2.14
PRPF38A-203ENST00000487160 EIF5AL1Q6IS14 154 aaKnown RBP1.7□□□□□ -2.14
PRPF38A-203ENST00000487160 AQP10Q96PS8 301 aa1.7□□□□□ -2.14
PRPF38A-203ENST00000487160 TRAV12-1A0A0B4J245 112 aa1.69□□□□□ -2.14
PRPF38A-203ENST00000487160 LOC107984640A0A0U1RRK4 108 aa1.69□□□□□ -2.14
PRPF38A-203ENST00000487160 ARPC5O15511 151 aa1.69□□□□□ -2.14
PRPF38A-203ENST00000487160 TCRAP04437 139 aa1.69□□□□□ -2.14
PRPF38A-203ENST00000487160 ARMS2P0C7Q2 107 aa1.69□□□□□ -2.14
PRPF38A-203ENST00000487160 SCGB1A1P11684 91 aa1.69□□□□□ -2.14
PRPF38A-203ENST00000487160 TPT1P13693 172 aaKnown RBP1.69□□□□□ -2.14
PRPF38A-203ENST00000487160 FAUP35544 74 aaKnown RBP1.69□□□□□ -2.14
PRPF38A-203ENST00000487160 RAB4BP61018 213 aa1.69□□□□□ -2.14
PRPF38A-203ENST00000487160 KRTAP19-2Q3LHN2 52 aa1.69□□□□□ -2.14
PRPF38A-203ENST00000487160 ASB16-AS1Q495Z4 193 aa1.69□□□□□ -2.14
PRPF38A-203ENST00000487160 PFDN1O60925 122 aa1.68□□□□□ -2.14
PRPF38A-203ENST00000487160 Q5XG85 94 aa1.68□□□□□ -2.14
PRPF38A-203ENST00000487160 TOMM5Q8N4H5 51 aa1.68□□□□□ -2.14
PRPF38A-203ENST00000487160 C5orf17Q8NAS9 161 aa1.68□□□□□ -2.14
PRPF38A-203ENST00000487160 LAMTOR2Q9Y2Q5 125 aa1.68□□□□□ -2.14
PRPF38A-203ENST00000487160 SSPOA2VEC9 5147 aa1.67□□□□□ -2.14
PRPF38A-203ENST00000487160 IGKV2D-26A0A0A0MRZ7 120 aa1.67□□□□□ -2.14
PRPF38A-203ENST00000487160 IGHV1-58A0A0C4DH39 117 aa1.67□□□□□ -2.14
PRPF38A-203ENST00000487160 C17orf112F2Z3M2 114 aa1.67□□□□□ -2.14
PRPF38A-203ENST00000487160 HIST1H2BKO60814 126 aa1.67□□□□□ -2.14
PRPF38A-203ENST00000487160 HIST1H2BJP06899 126 aa1.67□□□□□ -2.14
PRPF38A-203ENST00000487160 CRIP1P50238 77 aa1.67□□□□□ -2.14
PRPF38A-203ENST00000487160 SPCS2Q15005 226 aa1.67□□□□□ -2.14
PRPF38A-203ENST00000487160 OR10AG1Q8NH19 301 aa1.67□□□□□ -2.14
PRPF38A-203ENST00000487160 Q9H521 79 aa1.67□□□□□ -2.14
PRPF38A-203ENST00000487160 ARL2-SNX15V9GYD0 113 aa1.67□□□□□ -2.14
PRPF38A-203ENST00000487160 USH2AO75445 5202 aa1.67□□□□□ -2.14
PRPF38A-203ENST00000487160 A0A087WXM4 84 aa1.66□□□□□ -2.14
PRPF38A-203ENST00000487160 CCL25O15444 150 aa1.66□□□□□ -2.14
PRPF38A-203ENST00000487160 NDUFB6O95139 128 aa1.66□□□□□ -2.14
PRPF38A-203ENST00000487160 ARL14EPLP0DKL9 152 aa1.66□□□□□ -2.14
PRPF38A-203ENST00000487160 Q86TA4 180 aa1.66□□□□□ -2.14
PRPF38A-203ENST00000487160 TSKUQ8WUA8 353 aa1.66□□□□□ -2.14
PRPF38A-203ENST00000487160 C14orf132Q9NPU4 83 aa1.66□□□□□ -2.14
PRPF38A-203ENST00000487160 NIT2Q9NQR4 276 aa1.66□□□□□ -2.14
PRPF38A-203ENST00000487160 FCGBPQ9Y6R7 5405 aaPredicted RBP1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms