RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 MIR22HGQ0VDD5 57 aa1.28□□□□□ -2.2
SNRNP27-204ENST00000487029 KLK9Q2XQG4 91 aa1.28□□□□□ -2.2
SNRNP27-204ENST00000487029 TNCP24821 2201 aa1.28□□□□□ -2.2
SNRNP27-204ENST00000487029 PDE4DIPQ5VU43 2346 aa1.27□□□□□ -2.21
SNRNP27-204ENST00000487029 CLPSL1A2RUU4 121 aa1.27□□□□□ -2.21
SNRNP27-204ENST00000487029 IGLV1-51P01701 117 aa1.27□□□□□ -2.21
SNRNP27-204ENST00000487029 ACYP2P14621 99 aa1.27□□□□□ -2.21
SNRNP27-204ENST00000487029 ROMO1P60602 79 aa1.27□□□□□ -2.21
SNRNP27-204ENST00000487029 COX6A2Q02221 97 aa1.27□□□□□ -2.21
SNRNP27-204ENST00000487029 C1orf137Q5JT78 98 aa1.27□□□□□ -2.21
SNRNP27-204ENST00000487029 Q6ZRN7 208 aaPredicted RBP1.27□□□□□ -2.21
SNRNP27-204ENST00000487029 RHPN1-AS1Q9BWJ2 59 aa1.27□□□□□ -2.21
SNRNP27-204ENST00000487029 SORL1Q92673 2214 aa1.26□□□□□ -2.21
SNRNP27-204ENST00000487029 A0A087WSZ3 146 aa1.26□□□□□ -2.21
SNRNP27-204ENST00000487029 C10orf142B7Z368 130 aa1.26□□□□□ -2.21
SNRNP27-204ENST00000487029 PRB1P04280 392 aa1.26□□□□□ -2.21
SNRNP27-204ENST00000487029 CSAG1Q6PB30 78 aa1.26□□□□□ -2.21
SNRNP27-204ENST00000487029 SPATA8Q6RVD6 105 aa1.26□□□□□ -2.21
SNRNP27-204ENST00000487029 DEFB104AQ8WTQ1 72 aa1.26□□□□□ -2.21
SNRNP27-204ENST00000487029 C4orf3Q8WVX3 66 aa1.26□□□□□ -2.21
SNRNP27-204ENST00000487029 PLAC8Q9NZF1 115 aa1.26□□□□□ -2.21
SNRNP27-204ENST00000487029 NAV3Q8IVL0 2385 aa1.26□□□□□ -2.21
SNRNP27-204ENST00000487029 WDR87Q6ZQQ6 2873 aa1.26□□□□□ -2.21
SNRNP27-204ENST00000487029 IGKV3-7A0A075B6H7 116 aa1.25□□□□□ -2.21
SNRNP27-204ENST00000487029 IGLV5-48A0A075B6I7 105 aa1.25□□□□□ -2.21
SNRNP27-204ENST00000487029 TRGV1A0A0A0MS02 117 aa1.25□□□□□ -2.21
SNRNP27-204ENST00000487029 IGKV3OR2-268A0A0C4DH90 116 aa1.25□□□□□ -2.21
SNRNP27-204ENST00000487029 LINC00959A0A1B0GUT2 108 aa1.25□□□□□ -2.21
SNRNP27-204ENST00000487029 HTN1P15515 57 aa1.25□□□□□ -2.21
SNRNP27-204ENST00000487029 SPINK7P58062 85 aa1.25□□□□□ -2.21
SNRNP27-204ENST00000487029 DEFB131AP59861 70 aa1.25□□□□□ -2.21
SNRNP27-204ENST00000487029 SPINK13Q1W4C9 94 aa1.25□□□□□ -2.21
SNRNP27-204ENST00000487029 KRTAP21-3Q3LHN1 58 aa1.25□□□□□ -2.21
SNRNP27-204ENST00000487029 WFDC10BQ8IUB3 73 aa1.25□□□□□ -2.21
SNRNP27-204ENST00000487029 C9orf163Q8N9P6 203 aa1.25□□□□□ -2.21
SNRNP27-204ENST00000487029 SPRR4Q96PI1 79 aa1.25□□□□□ -2.21
SNRNP27-204ENST00000487029 DNAJC13O75165 2243 aa1.25□□□□□ -2.21
SNRNP27-204ENST00000487029 MUC4Q99102 2169 aa1.25□□□□□ -2.21
SNRNP27-204ENST00000487029 CR1P17927 2039 aa1.25□□□□□ -2.21
SNRNP27-204ENST00000487029 CNTRLQ7Z7A1 2325 aa1.24□□□□□ -2.21
SNRNP27-204ENST00000487029 F5P12259 2224 aa1.24□□□□□ -2.21
SNRNP27-204ENST00000487029 RTTNQ86VV8 2226 aa1.24□□□□□ -2.21
SNRNP27-204ENST00000487029 GVQW2A0A096LPI5 108 aaPredicted RBP1.24□□□□□ -2.21
SNRNP27-204ENST00000487029 NUPR2A6NF83 97 aa1.24□□□□□ -2.21
SNRNP27-204ENST00000487029 B4DSR2 109 aa1.24□□□□□ -2.21
SNRNP27-204ENST00000487029 H3BUX3 64 aa1.24□□□□□ -2.21
SNRNP27-204ENST00000487029 WFDC13Q8IUB5 93 aa1.24□□□□□ -2.21
SNRNP27-204ENST00000487029 KIAA0100Q14667 2235 aaKnown RBP1.24□□□□□ -2.21
SNRNP27-204ENST00000487029 MED13Q9UHV7 2174 aa1.24□□□□□ -2.21
SNRNP27-204ENST00000487029 ASCC3Q8N3C0 2202 aaKnown RBP1.23□□□□□ -2.21
SNRNP27-204ENST00000487029 A0A0C4DFX4 3053 aa1.23□□□□□ -2.21
SNRNP27-204ENST00000487029 A0A096LNT2 108 aa1.23□□□□□ -2.21
SNRNP27-204ENST00000487029 K7EQZ3 153 aa1.23□□□□□ -2.21
SNRNP27-204ENST00000487029 M0R2N4 97 aa1.23□□□□□ -2.21
SNRNP27-204ENST00000487029 ANGP03950 147 aaKnown RBP1.23□□□□□ -2.21
SNRNP27-204ENST00000487029 DEFB105AQ8NG35 78 aa1.23□□□□□ -2.21
SNRNP27-204ENST00000487029 C6orf48Q9UBA6 75 aa1.23□□□□□ -2.21
SNRNP27-204ENST00000487029 A8MTW9 85 aa1.22□□□□□ -2.21
SNRNP27-204ENST00000487029 DEFB119Q8N690 84 aa1.22□□□□□ -2.21
SNRNP27-204ENST00000487029 C5orf56Q8N8D9 126 aa1.22□□□□□ -2.21
SNRNP27-204ENST00000487029 URB1O60287 2271 aaKnown RBP1.22□□□□□ -2.21
SNRNP27-204ENST00000487029 KNL1Q8NG31 2342 aa1.21□□□□□ -2.22
SNRNP27-204ENST00000487029 PTPRQQ9UMZ3 2332 aa1.21□□□□□ -2.22
SNRNP27-204ENST00000487029 LYNX1G3V0Z9 82 aa1.21□□□□□ -2.22
SNRNP27-204ENST00000487029 G3V318 75 aa1.21□□□□□ -2.22
SNRNP27-204ENST00000487029 DEFB113Q30KQ7 82 aa1.21□□□□□ -2.22
SNRNP27-204ENST00000487029 CADP27708 2225 aa1.21□□□□□ -2.22
SNRNP27-204ENST00000487029 Q6ZRX8 168 aa1.2□□□□□ -2.22
SNRNP27-204ENST00000487029 PRO0255Q9UI72 69 aa1.2□□□□□ -2.22
SNRNP27-204ENST00000487029 MUC6Q6W4X9 2439 aa1.2□□□□□ -2.22
SNRNP27-204ENST00000487029 TENM1Q9UKZ4 2725 aa1.19□□□□□ -2.22
SNRNP27-204ENST00000487029 MED13LQ71F56 2210 aa1.19□□□□□ -2.22
SNRNP27-204ENST00000487029 FN1P02751 2386 aaKnown RBP1.19□□□□□ -2.22
SNRNP27-204ENST00000487029 DEFB1P60022 68 aa1.19□□□□□ -2.22
SNRNP27-204ENST00000487029 RPL37AP61513 92 aaKnown RBP1.19□□□□□ -2.22
SNRNP27-204ENST00000487029 DEFB109BQ30KR1 87 aa1.19□□□□□ -2.22
SNRNP27-204ENST00000487029 UNQ6190/PRO20217Q6UXQ8 127 aa1.19□□□□□ -2.22
SNRNP27-204ENST00000487029 SSBP3-AS1Q7Z2R9 100 aa1.19□□□□□ -2.22
SNRNP27-204ENST00000487029 CCL19Q99731 98 aa1.19□□□□□ -2.22
SNRNP27-204ENST00000487029 MRPL34Q9BQ48 92 aaKnown RBP1.19□□□□□ -2.22
SNRNP27-204ENST00000487029 NOP10Q9NPE3 64 aaKnown RBP1.19□□□□□ -2.22
SNRNP27-204ENST00000487029 CUL9Q8IWT3 2517 aa1.19□□□□□ -2.22
SNRNP27-204ENST00000487029 PRRC2BQ5JSZ5 2229 aaKnown RBP1.19□□□□□ -2.22
SNRNP27-204ENST00000487029 ASXL3Q9C0F0 2248 aa1.18□□□□□ -2.22
SNRNP27-204ENST00000487029 LY6G6CO95867 125 aa1.18□□□□□ -2.22
SNRNP27-204ENST00000487029 DEFB132Q7Z7B7 95 aa1.18□□□□□ -2.22
SNRNP27-204ENST00000487029 PRO3102Q9H379 93 aa1.18□□□□□ -2.22
SNRNP27-204ENST00000487029 CRIPTQ9P021 101 aa1.18□□□□□ -2.22
SNRNP27-204ENST00000487029 KMT2BQ9UMN6 2715 aaPredicted RBP1.18□□□□□ -2.22
SNRNP27-204ENST00000487029 BRWD1Q9NSI6 2320 aa1.18□□□□□ -2.22
SNRNP27-204ENST00000487029 MMP24-AS1A0A0U1RRL7 71 aa1.17□□□□□ -2.22
SNRNP27-204ENST00000487029 LELP1Q5T871 98 aa1.17□□□□□ -2.22
SNRNP27-204ENST00000487029 CLPSL2Q6UWE3 100 aa1.17□□□□□ -2.22
SNRNP27-204ENST00000487029 COX6B2Q6YFQ2 88 aa1.17□□□□□ -2.22
SNRNP27-204ENST00000487029 Q6ZSA8 131 aa1.17□□□□□ -2.22
SNRNP27-204ENST00000487029 DOPEY2Q9Y3R5 2298 aa1.17□□□□□ -2.22
SNRNP27-204ENST00000487029 ABCA4P78363 2273 aa1.16□□□□□ -2.22
SNRNP27-204ENST00000487029 LYNX1P0DP58 116 aa1.16□□□□□ -2.22
SNRNP27-204ENST00000487029 DEFB130BP0DP73 79 aa1.16□□□□□ -2.22
SNRNP27-204ENST00000487029 DEFB130AP0DP74 79 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms