RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 ZNF861PO60384 105 aa7.07□□□□□ -1.28
SRGAP3-207ENST00000485983 SPINT4Q6UDR6 99 aa7.06□□□□□ -1.28
SRGAP3-207ENST00000485983 WDFY4Q6ZS81 3184 aa7.06□□□□□ -1.28
SRGAP3-207ENST00000485983 RBM12B-AS1Q9P1G2 102 aa7.06□□□□□ -1.28
SRGAP3-207ENST00000485983 IGLV1-50A0A075B6I6 118 aa7.06□□□□□ -1.28
SRGAP3-207ENST00000485983 A0A087WTM6 91 aa7.05□□□□□ -1.28
SRGAP3-207ENST00000485983 LINC01600Q96MT4 127 aa7.05□□□□□ -1.28
SRGAP3-207ENST00000485983 C9orf92A6NGG3 77 aa7.04□□□□□ -1.28
SRGAP3-207ENST00000485983 KRTAP10-11P60412 298 aa7.04□□□□□ -1.28
SRGAP3-207ENST00000485983 ANKRD17O75179 2603 aaKnown RBP7.04□□□□□ -1.28
SRGAP3-207ENST00000485983 IGLV5-37A0A075B6J1 123 aa7.04□□□□□ -1.28
SRGAP3-207ENST00000485983 IGLV6-57P01721 117 aa7.04□□□□□ -1.28
SRGAP3-207ENST00000485983 SERTAD4-AS1Q5TG53 156 aa7.04□□□□□ -1.28
SRGAP3-207ENST00000485983 TRANK1O15050 2925 aa7.04□□□□□ -1.28
SRGAP3-207ENST00000485983 DSCR10P59022 87 aa7.03□□□□□ -1.28
SRGAP3-207ENST00000485983 C19orf73Q9NVV2 129 aa7.03□□□□□ -1.28
SRGAP3-207ENST00000485983 APLNQ9ULZ1 77 aa7.03□□□□□ -1.28
SRGAP3-207ENST00000485983 ATRQ13535 2644 aa7.03□□□□□ -1.28
SRGAP3-207ENST00000485983 OBSCN-AS1Q96MR7 158 aa7.03□□□□□ -1.28
SRGAP3-207ENST00000485983 CFAP54Q96N23 3096 aa7.03□□□□□ -1.28
SRGAP3-207ENST00000485983 KCNQ1DNQ9H478 68 aa7.03□□□□□ -1.28
SRGAP3-207ENST00000485983 TM2D3Q9BRN9 247 aa7.02□□□□□ -1.29
SRGAP3-207ENST00000485983 CRIPTQ9P021 101 aa7.01□□□□□ -1.29
SRGAP3-207ENST00000485983 PTPRBP23467 1997 aa7.01□□□□□ -1.29
SRGAP3-207ENST00000485983 USP24Q9UPU5 2620 aa7□□□□□ -1.29
SRGAP3-207ENST00000485983 VCANP13611 3396 aa7□□□□□ -1.29
SRGAP3-207ENST00000485983 C9orf163Q8N9P6 203 aa7□□□□□ -1.29
SRGAP3-207ENST00000485983 MAST4O15021 2626 aa6.99□□□□□ -1.29
SRGAP3-207ENST00000485983 CSNK1G2-AS1Q8NCQ2 148 aa6.99□□□□□ -1.29
SRGAP3-207ENST00000485983 C8orf17Q9NRJ1 99 aa6.99□□□□□ -1.29
SRGAP3-207ENST00000485983 K7EQZ3 153 aa6.99□□□□□ -1.29
SRGAP3-207ENST00000485983 PCSK5Q92824 1860 aa6.99□□□□□ -1.29
SRGAP3-207ENST00000485983 UQCR11O14957 56 aa6.99□□□□□ -1.29
SRGAP3-207ENST00000485983 PRO0628Q9UI54 55 aa6.98□□□□□ -1.29
SRGAP3-207ENST00000485983 KLK9Q2XQG4 91 aa6.98□□□□□ -1.29
SRGAP3-207ENST00000485983 IGFL1Q6UW32 110 aa6.98□□□□□ -1.29
SRGAP3-207ENST00000485983 MGAQ8IWI9 3026 aa6.98□□□□□ -1.29
SRGAP3-207ENST00000485983 A0A1B0GVX0 72 aa6.97□□□□□ -1.29
SRGAP3-207ENST00000485983 IGLV7-43P04211 117 aa6.97□□□□□ -1.29
SRGAP3-207ENST00000485983 SMCPP49901 116 aaPredicted RBP6.96□□□□□ -1.29
SRGAP3-207ENST00000485983 LINC00528Q8N1L1 170 aa6.96□□□□□ -1.29
SRGAP3-207ENST00000485983 PRR34Q9NV39 138 aa6.96□□□□□ -1.29
SRGAP3-207ENST00000485983 PRR15Q8IV56 129 aa6.96□□□□□ -1.3
SRGAP3-207ENST00000485983 COA5Q86WW8 74 aa6.95□□□□□ -1.3
SRGAP3-207ENST00000485983 COL27A1Q8IZC6 1860 aaPredicted RBP6.95□□□□□ -1.3
SRGAP3-207ENST00000485983 C15orf56Q8N910 161 aa6.95□□□□□ -1.3
SRGAP3-207ENST00000485983 BPTFQ12830 3046 aa6.95□□□□□ -1.3
SRGAP3-207ENST00000485983 SETXQ7Z333 2677 aaKnown RBP6.95□□□□□ -1.3
SRGAP3-207ENST00000485983 DNAH14Q0VDD8 3507 aa6.94□□□□□ -1.3
SRGAP3-207ENST00000485983 CELSR3Q9NYQ7 3312 aa6.94□□□□□ -1.3
SRGAP3-207ENST00000485983 COL6A3P12111 3177 aa6.94□□□□□ -1.3
SRGAP3-207ENST00000485983 CENPEQ02224 2701 aa6.93□□□□□ -1.3
SRGAP3-207ENST00000485983 LINC01554Q52M75 96 aa6.93□□□□□ -1.3
SRGAP3-207ENST00000485983 TLX1NBP0CAT3 122 aa6.92□□□□□ -1.3
SRGAP3-207ENST00000485983 PSORS1C2Q9UIG4 136 aa6.92□□□□□ -1.3
SRGAP3-207ENST00000485983 ZNF575Q86XF7 245 aa6.92□□□□□ -1.3
SRGAP3-207ENST00000485983 PLA2G2DQ9UNK4 145 aa6.92□□□□□ -1.3
SRGAP3-207ENST00000485983 ERC2-IT1O76042 136 aa6.91□□□□□ -1.3
SRGAP3-207ENST00000485983 RPS28P62857 69 aaKnown RBP6.91□□□□□ -1.3
SRGAP3-207ENST00000485983 ANAPC11Q9NYG5 84 aa6.91□□□□□ -1.3
SRGAP3-207ENST00000485983 C9orf129Q5T035 196 aaKnown RBP6.91□□□□□ -1.3
SRGAP3-207ENST00000485983 VPS13AQ96RL7 3174 aa6.9□□□□□ -1.3
SRGAP3-207ENST00000485983 LITAFQ99732 161 aa6.9□□□□□ -1.3
SRGAP3-207ENST00000485983 PRO0461Q9UI25 63 aa6.9□□□□□ -1.3
SRGAP3-207ENST00000485983 CYP4F30PQ9H0H9 118 aa6.9□□□□□ -1.3
SRGAP3-207ENST00000485983 KRTAP10-3P60369 221 aa6.9□□□□□ -1.31
SRGAP3-207ENST00000485983 EYSQ5T1H1 3165 aa6.89□□□□□ -1.31
SRGAP3-207ENST00000485983 MIR22HGQ0VDD5 57 aa6.89□□□□□ -1.31
SRGAP3-207ENST00000485983 Q6ZSA8 131 aa6.89□□□□□ -1.31
SRGAP3-207ENST00000485983 Q8N377 158 aa6.89□□□□□ -1.31
SRGAP3-207ENST00000485983 SPRR4Q96PI1 79 aa6.88□□□□□ -1.31
SRGAP3-207ENST00000485983 LAMA1P25391 3075 aa6.88□□□□□ -1.31
SRGAP3-207ENST00000485983 A0A096LNT2 108 aa6.87□□□□□ -1.31
SRGAP3-207ENST00000485983 CNBPP62633 177 aaKnown RBP6.87□□□□□ -1.31
SRGAP3-207ENST00000485983 LINC00612Q8N6U2 182 aa6.87□□□□□ -1.31
SRGAP3-207ENST00000485983 M0R2T5 61 aa6.87□□□□□ -1.31
SRGAP3-207ENST00000485983 C4orf26Q17RF5 130 aa6.87□□□□□ -1.31
SRGAP3-207ENST00000485983 A0A1W2PNN7 141 aa6.86□□□□□ -1.31
SRGAP3-207ENST00000485983 A8MUN3 132 aa6.85□□□□□ -1.31
SRGAP3-207ENST00000485983 GIG44P09565 113 aaPredicted RBP6.85□□□□□ -1.31
SRGAP3-207ENST00000485983 IGLV5-48A0A075B6I7 105 aa6.83□□□□□ -1.32
SRGAP3-207ENST00000485983 IGLV7-46A0A075B6I9 117 aa6.83□□□□□ -1.32
SRGAP3-207ENST00000485983 A0A0G2JQZ4 141 aa6.83□□□□□ -1.32
SRGAP3-207ENST00000485983 DSPP15924 2871 aaKnown RBP6.83□□□□□ -1.32
SRGAP3-207ENST00000485983 A0A0D9SG42 100 aa6.82□□□□□ -1.32
SRGAP3-207ENST00000485983 FAM104AQ969W3 186 aa6.81□□□□□ -1.32
SRGAP3-207ENST00000485983 ZNF292O60281 2723 aa6.81□□□□□ -1.32
SRGAP3-207ENST00000485983 TNP2Q05952 138 aa6.8□□□□□ -1.32
SRGAP3-207ENST00000485983 CASC10Q5T4H9 136 aa6.8□□□□□ -1.32
SRGAP3-207ENST00000485983 Q8N1X5 172 aa6.8□□□□□ -1.32
SRGAP3-207ENST00000485983 CDC42SE1Q9NRR8 79 aa6.8□□□□□ -1.32
SRGAP3-207ENST00000485983 CFAP46Q8IYW2 2715 aa6.8□□□□□ -1.32
SRGAP3-207ENST00000485983 AKAP13Q12802 2813 aa6.8□□□□□ -1.32
SRGAP3-207ENST00000485983 SPEGQ15772 3267 aa6.78□□□□□ -1.32
SRGAP3-207ENST00000485983 CAMK2N1Q7Z7J9 78 aa6.78□□□□□ -1.32
SRGAP3-207ENST00000485983 HELZ2Q9BYK8 2649 aaKnown RBP6.78□□□□□ -1.32
SRGAP3-207ENST00000485983 SPTBN5Q9NRC6 3674 aaKnown RBP6.77□□□□□ -1.33
SRGAP3-207ENST00000485983 MAP1AP78559 2803 aaPredicted RBP6.76□□□□□ -1.33
SRGAP3-207ENST00000485983 CD164Q04900 197 aa6.75□□□□□ -1.33
SRGAP3-207ENST00000485983 EIF4EBP3O60516 100 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms