RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 SCGB1D4Q6XE38 83 aa5.75□□□□□ -1.49
SHROOM3-207ENST00000485780 Q6ZVH6 145 aa5.75□□□□□ -1.49
SHROOM3-207ENST00000485780 NKAPP1Q8N9T2 125 aa5.75□□□□□ -1.49
SHROOM3-207ENST00000485780 LINC00308Q8TCZ7 52 aa5.75□□□□□ -1.49
SHROOM3-207ENST00000485780 LINC00167Q96N53 147 aa5.75□□□□□ -1.49
SHROOM3-207ENST00000485780 PSORS1C2Q9UIG4 136 aa5.75□□□□□ -1.49
SHROOM3-207ENST00000485780 TRBV10-2A0A0K0K1G8 114 aa5.74□□□□□ -1.49
SHROOM3-207ENST00000485780 SPANXB1Q9NS25 103 aaPredicted RBP5.74□□□□□ -1.49
SHROOM3-207ENST00000485780 IGLV1-50A0A075B6I6 118 aa5.73□□□□□ -1.49
SHROOM3-207ENST00000485780 M0R378 163 aa5.73□□□□□ -1.49
SHROOM3-207ENST00000485780 GHRHP01286 108 aa5.73□□□□□ -1.49
SHROOM3-207ENST00000485780 IFITM1P13164 125 aa5.73□□□□□ -1.49
SHROOM3-207ENST00000485780 A6NDN8 102 aa5.72□□□□□ -1.49
SHROOM3-207ENST00000485780 UBE2BP63146 152 aa5.72□□□□□ -1.49
SHROOM3-207ENST00000485780 LCE3BQ5TA77 95 aa5.72□□□□□ -1.49
SHROOM3-207ENST00000485780 CEND1Q8N111 149 aa5.72□□□□□ -1.49
SHROOM3-207ENST00000485780 A0A1B0GWB2 263 aa5.71□□□□□ -1.5
SHROOM3-207ENST00000485780 SRSF9Q13242 221 aaKnown RBP eCLIP5.71□□□□□ -1.5
SHROOM3-207ENST00000485780 COPS9Q8WXC6 57 aa5.71□□□□□ -1.5
SHROOM3-207ENST00000485780 IGKV2-28A0A075B6P5 120 aa5.7□□□□□ -1.5
SHROOM3-207ENST00000485780 GAGE10A6NGK3 116 aa5.7□□□□□ -1.5
SHROOM3-207ENST00000485780 C9orf118A6NHY6 69 aa5.7□□□□□ -1.5
SHROOM3-207ENST00000485780 RPL37AP8A6NKH3 93 aa5.7□□□□□ -1.5
SHROOM3-207ENST00000485780 NCR3O14931 201 aa5.7□□□□□ -1.5
SHROOM3-207ENST00000485780 IGKV2D-28P01615 120 aa5.7□□□□□ -1.5
SHROOM3-207ENST00000485780 IGLV7-43P04211 117 aa5.7□□□□□ -1.5
SHROOM3-207ENST00000485780 FXYD2P54710 66 aa5.7□□□□□ -1.5
SHROOM3-207ENST00000485780 NPC2P61916 151 aa5.7□□□□□ -1.5
SHROOM3-207ENST00000485780 UBE2V1Q13404 147 aa5.7□□□□□ -1.5
SHROOM3-207ENST00000485780 KCNQ1DNQ9H478 68 aa5.7□□□□□ -1.5
SHROOM3-207ENST00000485780 TRBV10-3A0A0K0K1G6 114 aa5.69□□□□□ -1.5
SHROOM3-207ENST00000485780 PRYO14603 147 aa5.69□□□□□ -1.5
SHROOM3-207ENST00000485780 BCE1O60756 84 aa5.69□□□□□ -1.5
SHROOM3-207ENST00000485780 IGLV6-57P01721 117 aa5.69□□□□□ -1.5
SHROOM3-207ENST00000485780 SPRR1AP35321 89 aa5.69□□□□□ -1.5
SHROOM3-207ENST00000485780 C1orf137Q5JT78 98 aa5.69□□□□□ -1.5
SHROOM3-207ENST00000485780 KRTAP13-1Q8IUC0 172 aa5.69□□□□□ -1.5
SHROOM3-207ENST00000485780 KRTAP4-16G5E9R7 235 aaPredicted RBP5.68□□□□□ -1.5
SHROOM3-207ENST00000485780 MUSTN1Q8IVN3 82 aa5.68□□□□□ -1.5
SHROOM3-207ENST00000485780 HIST1H4GQ99525 98 aa5.68□□□□□ -1.5
SHROOM3-207ENST00000485780 TMEM126AQ9H061 195 aa5.68□□□□□ -1.5
SHROOM3-207ENST00000485780 HMCN2Q8NDA2 5059 aa5.68□□□□□ -1.5
SHROOM3-207ENST00000485780 REG3GQ6UW15 175 aa5.67□□□□□ -1.5
SHROOM3-207ENST00000485780 SPINK6Q6UWN8 80 aa5.67□□□□□ -1.5
SHROOM3-207ENST00000485780 LINC00337Q8N6G1 96 aa5.67□□□□□ -1.5
SHROOM3-207ENST00000485780 TNXBP22105 4242 aa5.66□□□□□ -1.5
SHROOM3-207ENST00000485780 ZNF861PO60384 105 aa5.66□□□□□ -1.5
SHROOM3-207ENST00000485780 H0Y9J4 135 aa5.65□□□□□ -1.5
SHROOM3-207ENST00000485780 A0A1W2PPM0 123 aa5.64□□□□□ -1.51
SHROOM3-207ENST00000485780 A4D1N5 150 aa5.64□□□□□ -1.51
SHROOM3-207ENST00000485780 RPL28P46779 137 aaKnown RBP5.64□□□□□ -1.51
SHROOM3-207ENST00000485780 VAMP3Q15836 100 aa5.64□□□□□ -1.51
SHROOM3-207ENST00000485780 S100A7L2Q5SY68 101 aa5.64□□□□□ -1.51
SHROOM3-207ENST00000485780 DIRC1Q969H9 104 aa5.64□□□□□ -1.51
SHROOM3-207ENST00000485780 KRTAP9-9Q9BYP9 154 aa5.64□□□□□ -1.51
SHROOM3-207ENST00000485780 KRTAP9-4Q9BYQ2 154 aa5.64□□□□□ -1.51
SHROOM3-207ENST00000485780 CBY1Q9Y3M2 126 aa5.64□□□□□ -1.51
SHROOM3-207ENST00000485780 TRAV23DV6A0A075B6W5 121 aa5.63□□□□□ -1.51
SHROOM3-207ENST00000485780 H3BUT2 72 aa5.63□□□□□ -1.51
SHROOM3-207ENST00000485780 NHP2Q9NX24 153 aaKnown RBP5.63□□□□□ -1.51
SHROOM3-207ENST00000485780 TRAV13-2A0A0B4J235 113 aa5.62□□□□□ -1.51
SHROOM3-207ENST00000485780 K7EP34 96 aa5.62□□□□□ -1.51
SHROOM3-207ENST00000485780 K7ERJ3 54 aa5.62□□□□□ -1.51
SHROOM3-207ENST00000485780 ZNF73O43830 326 aaPredicted RBP5.62□□□□□ -1.51
SHROOM3-207ENST00000485780 PRLHP81277 87 aa5.62□□□□□ -1.51
SHROOM3-207ENST00000485780 FAM19A1Q7Z5A9 133 aa5.62□□□□□ -1.51
SHROOM3-207ENST00000485780 B5MCH6 92 aa5.61□□□□□ -1.51
SHROOM3-207ENST00000485780 KRTAP1-4P0C5Y4 121 aa5.61□□□□□ -1.51
SHROOM3-207ENST00000485780 CFC1BP0CG36 223 aa5.61□□□□□ -1.51
SHROOM3-207ENST00000485780 CFC1P0CG37 223 aa5.61□□□□□ -1.51
SHROOM3-207ENST00000485780 MT1HL1P0DM35 61 aa5.61□□□□□ -1.51
SHROOM3-207ENST00000485780 FABP2P12104 132 aa5.61□□□□□ -1.51
SHROOM3-207ENST00000485780 UBE2AP49459 152 aa5.61□□□□□ -1.51
SHROOM3-207ENST00000485780 Q6ZRX8 168 aa5.61□□□□□ -1.51
SHROOM3-207ENST00000485780 GTF2H5Q6ZYL4 71 aa5.61□□□□□ -1.51
SHROOM3-207ENST00000485780 OR13C6PQ8NH95 151 aa5.61□□□□□ -1.51
SHROOM3-207ENST00000485780 RAB37Q96AX2 223 aa5.61□□□□□ -1.51
SHROOM3-207ENST00000485780 A0A0B4J2C4 111 aa5.6□□□□□ -1.51
SHROOM3-207ENST00000485780 ETDCA0A1B0GVM5 59 aa5.6□□□□□ -1.51
SHROOM3-207ENST00000485780 KRTAP4-12Q9BQ66 201 aa5.6□□□□□ -1.51
SHROOM3-207ENST00000485780 KRTAP4-8A0A0G2JLE6 195 aa5.59□□□□□ -1.51
SHROOM3-207ENST00000485780 TRBV7-6A0A0J9YX20 115 aa5.59□□□□□ -1.51
SHROOM3-207ENST00000485780 ELOF1P60002 83 aaKnown RBP5.59□□□□□ -1.51
SHROOM3-207ENST00000485780 SMCR5Q8TEV8 140 aa5.59□□□□□ -1.51
SHROOM3-207ENST00000485780 LINC01600Q96MT4 127 aa5.59□□□□□ -1.51
SHROOM3-207ENST00000485780 C6orf99Q4VX62 202 aa5.58□□□□□ -1.52
SHROOM3-207ENST00000485780 SMIM11BQ8TCY0 68 aa5.58□□□□□ -1.52
SHROOM3-207ENST00000485780 NAA38Q9BRA0 125 aaKnown RBP5.58□□□□□ -1.52
SHROOM3-207ENST00000485780 Q9BRP9 147 aa5.58□□□□□ -1.52
SHROOM3-207ENST00000485780 PRO1854Q9UHT4 67 aa5.58□□□□□ -1.52
SHROOM3-207ENST00000485780 SPCS1Q9Y6A9 102 aa5.58□□□□□ -1.52
SHROOM3-207ENST00000485780 TSPAN13O95857 204 aa5.56□□□□□ -1.52
SHROOM3-207ENST00000485780 RPL13AP40429 203 aaKnown RBP5.56□□□□□ -1.52
SHROOM3-207ENST00000485780 HIGD2AQ9BW72 106 aa5.56□□□□□ -1.52
SHROOM3-207ENST00000485780 SPRR4Q96PI1 79 aa5.55□□□□□ -1.52
SHROOM3-207ENST00000485780 UBR4Q5T4S7 5183 aa5.55□□□□□ -1.52
SHROOM3-207ENST00000485780 F8W1H4 67 aa5.54□□□□□ -1.52
SHROOM3-207ENST00000485780 ERC2-IT1O76042 136 aa5.54□□□□□ -1.52
SHROOM3-207ENST00000485780 COX7BP24311 80 aa5.54□□□□□ -1.52
SHROOM3-207ENST00000485780 KRTAP10-8P60410 259 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms