RNA–Protein interactions for RNA: ENST00000485610.5

SMARCD3-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best)

Gene SMARCD3, Length 1,480 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-212ENST00000485610 RPL28P46779 137 aaKnown RBP10.99□□□□□ -0.65
SMARCD3-212ENST00000485610 DIRC1Q969H9 104 aa10.99□□□□□ -0.65
SMARCD3-212ENST00000485610 PSORS1C2Q9UIG4 136 aa10.99□□□□□ -0.65
SMARCD3-212ENST00000485610 C6orf99Q4VX62 202 aa10.97□□□□□ -0.65
SMARCD3-212ENST00000485610 COL5A1-AS1Q5SY13 56 aa10.97□□□□□ -0.65
SMARCD3-212ENST00000485610 LINC00528Q8N1L1 170 aa10.97□□□□□ -0.65
SMARCD3-212ENST00000485610 ETDCA0A1B0GVM5 59 aa10.95□□□□□ -0.66
SMARCD3-212ENST00000485610 BCE1O60756 84 aa10.95□□□□□ -0.66
SMARCD3-212ENST00000485610 KRTAP4-16G5E9R7 235 aaPredicted RBP10.94□□□□□ -0.66
SMARCD3-212ENST00000485610 SMR3BP02814 79 aaPredicted RBP10.94□□□□□ -0.66
SMARCD3-212ENST00000485610 TRBV7-6A0A0J9YX20 115 aa10.93□□□□□ -0.66
SMARCD3-212ENST00000485610 TAX1BP3O14907 124 aa10.93□□□□□ -0.66
SMARCD3-212ENST00000485610 TRIAP1O43715 76 aa10.93□□□□□ -0.66
SMARCD3-212ENST00000485610 PSMB2P49721 201 aa10.93□□□□□ -0.66
SMARCD3-212ENST00000485610 C1orf137Q5JT78 98 aa10.93□□□□□ -0.66
SMARCD3-212ENST00000485610 FAM19A1Q7Z5A9 133 aa10.93□□□□□ -0.66
SMARCD3-212ENST00000485610 COX7BP24311 80 aa10.92□□□□□ -0.66
SMARCD3-212ENST00000485610 RPL37AP61513 92 aaKnown RBP10.92□□□□□ -0.66
SMARCD3-212ENST00000485610 VAMP3Q15836 100 aa10.92□□□□□ -0.66
SMARCD3-212ENST00000485610 UBE2AP49459 152 aa10.91□□□□□ -0.66
SMARCD3-212ENST00000485610 ELOF1P60002 83 aaKnown RBP10.91□□□□□ -0.66
SMARCD3-212ENST00000485610 B5MCH6 92 aa10.9□□□□□ -0.66
SMARCD3-212ENST00000485610 Q6ZRX8 168 aa10.9□□□□□ -0.66
SMARCD3-212ENST00000485610 NAA38Q9BRA0 125 aaKnown RBP10.9□□□□□ -0.66
SMARCD3-212ENST00000485610 C9orf118A6NHY6 69 aa10.89□□□□□ -0.67
SMARCD3-212ENST00000485610 COX6CP09669 75 aa10.89□□□□□ -0.67
SMARCD3-212ENST00000485610 H0Y9J4 135 aa10.88□□□□□ -0.67
SMARCD3-212ENST00000485610 H3BUT2 72 aa10.88□□□□□ -0.67
SMARCD3-212ENST00000485610 PRLHP81277 87 aa10.88□□□□□ -0.67
SMARCD3-212ENST00000485610 H0YGX0 51 aa10.87□□□□□ -0.67
SMARCD3-212ENST00000485610 IGLV7-43P04211 117 aa10.87□□□□□ -0.67
SMARCD3-212ENST00000485610 KRTAP13-1Q8IUC0 172 aa10.87□□□□□ -0.67
SMARCD3-212ENST00000485610 RYR1P21817 5038 aa10.86□□□□□ -0.67
SMARCD3-212ENST00000485610 HSPG2P98160 4391 aa10.86□□□□□ -0.67
SMARCD3-212ENST00000485610 FAM229AH3BQW9 127 aa10.86□□□□□ -0.67
SMARCD3-212ENST00000485610 LYRM7Q5U5X0 104 aa10.86□□□□□ -0.67
SMARCD3-212ENST00000485610 SCGB1C2P0DMR2 95 aa10.85□□□□□ -0.67
SMARCD3-212ENST00000485610 ZNF861PO60384 105 aa10.84□□□□□ -0.67
SMARCD3-212ENST00000485610 PLA2G1BP04054 148 aaKnown RBP10.84□□□□□ -0.67
SMARCD3-212ENST00000485610 Q9BRP9 147 aa10.84□□□□□ -0.67
SMARCD3-212ENST00000485610 DHRS4-AS1Q9P1J3 65 aa10.84□□□□□ -0.67
SMARCD3-212ENST00000485610 VPS13BQ7Z7G8 4022 aa10.84□□□□□ -0.67
SMARCD3-212ENST00000485610 HIGD2AQ9BW72 106 aa10.83□□□□□ -0.68
SMARCD3-212ENST00000485610 KIAA1109Q2LD37 5005 aa10.83□□□□□ -0.68
SMARCD3-212ENST00000485610 A0A1W2PPM0 123 aa10.82□□□□□ -0.68
SMARCD3-212ENST00000485610 SLC25A20O43772 301 aa10.82□□□□□ -0.68
SMARCD3-212ENST00000485610 INAFM2P0DMQ5 153 aa10.82□□□□□ -0.68
SMARCD3-212ENST00000485610 Q5VSD8 79 aa10.82□□□□□ -0.68
SMARCD3-212ENST00000485610 LINC00575Q6W349 94 aa10.82□□□□□ -0.68
SMARCD3-212ENST00000485610 CLEC2BQ92478 149 aa10.82□□□□□ -0.68
SMARCD3-212ENST00000485610 KRTAP10-4P60372 401 aaPredicted RBP10.81□□□□□ -0.68
SMARCD3-212ENST00000485610 SMCR5Q8TEV8 140 aa10.81□□□□□ -0.68
SMARCD3-212ENST00000485610 BIRC6Q9NR09 4857 aa10.81□□□□□ -0.68
SMARCD3-212ENST00000485610 FABP2P12104 132 aa10.81□□□□□ -0.68
SMARCD3-212ENST00000485610 Q8N1X5 172 aa10.81□□□□□ -0.68
SMARCD3-212ENST00000485610 FAM218AQ96MZ4 157 aa10.81□□□□□ -0.68
SMARCD3-212ENST00000485610 A0A1B0GX51 115 aa10.79□□□□□ -0.68
SMARCD3-212ENST00000485610 hADV29S1A0JD25 119 aa10.79□□□□□ -0.68
SMARCD3-212ENST00000485610 SNCGO76070 127 aa10.79□□□□□ -0.68
SMARCD3-212ENST00000485610 LST1O00453 97 aa10.77□□□□□ -0.69
SMARCD3-212ENST00000485610 TRBV20-1A0A075B6N2 111 aa10.76□□□□□ -0.69
SMARCD3-212ENST00000485610 ERC2-IT1O76042 136 aa10.76□□□□□ -0.69
SMARCD3-212ENST00000485610 TCL1BO95988 128 aa10.76□□□□□ -0.69
SMARCD3-212ENST00000485610 FAT1Q14517 4588 aa10.76□□□□□ -0.69
SMARCD3-212ENST00000485610 ATXN8Q156A1 80 aa10.75□□□□□ -0.69
SMARCD3-212ENST00000485610 SPINK6Q6UWN8 80 aa10.74□□□□□ -0.69
SMARCD3-212ENST00000485610 DNAL4O96015 105 aa10.74□□□□□ -0.69
SMARCD3-212ENST00000485610 TRACP01848 142 aa10.74□□□□□ -0.69
SMARCD3-212ENST00000485610 KRTAP17-1Q9BYP8 105 aa10.74□□□□□ -0.69
SMARCD3-212ENST00000485610 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.73□□□□□ -0.69
SMARCD3-212ENST00000485610 Q6ZQY7 126 aa10.73□□□□□ -0.69
SMARCD3-212ENST00000485610 SPCS1Q9Y6A9 102 aa10.73□□□□□ -0.69
SMARCD3-212ENST00000485610 SRRM2Q9UQ35 2752 aaKnown RBP10.72□□□□□ -0.69
SMARCD3-212ENST00000485610 ZNF706Q9Y5V0 76 aaPredicted RBP10.72□□□□□ -0.69
SMARCD3-212ENST00000485610 ST20-AS1Q8NBB2 130 aa10.7□□□□□ -0.7
SMARCD3-212ENST00000485610 SPRR4Q96PI1 79 aa10.68□□□□□ -0.7
SMARCD3-212ENST00000485610 K7EP34 96 aa10.68□□□□□ -0.7
SMARCD3-212ENST00000485610 OCIAD2Q56VL3 154 aa10.68□□□□□ -0.7
SMARCD3-212ENST00000485610 IGLV5-48A0A075B6I7 105 aa10.67□□□□□ -0.7
SMARCD3-212ENST00000485610 PKHD1L1Q86WI1 4243 aa10.66□□□□□ -0.7
SMARCD3-212ENST00000485610 GTF2H5Q6ZYL4 71 aa10.66□□□□□ -0.7
SMARCD3-212ENST00000485610 ORMDL1Q9P0S3 153 aa10.66□□□□□ -0.7
SMARCD3-212ENST00000485610 H3BMG7 143 aa10.65□□□□□ -0.7
SMARCD3-212ENST00000485610 GHRHP01286 108 aa10.65□□□□□ -0.7
SMARCD3-212ENST00000485610 LINC01547P58512 204 aaPredicted RBP10.65□□□□□ -0.7
SMARCD3-212ENST00000485610 GAGE2AQ6NT46 116 aa10.65□□□□□ -0.7
SMARCD3-212ENST00000485610 DEFB105AQ8NG35 78 aa10.65□□□□□ -0.7
SMARCD3-212ENST00000485610 TEX49A0A1B0GTD5 131 aa10.64□□□□□ -0.71
SMARCD3-212ENST00000485610 SPRR1BP22528 89 aa10.64□□□□□ -0.71
SMARCD3-212ENST00000485610 PPDPFLQ8WWR9 84 aa10.64□□□□□ -0.71
SMARCD3-212ENST00000485610 LINC00483Q53H64 154 aa10.63□□□□□ -0.71
SMARCD3-212ENST00000485610 C9JAW5 83 aa10.62□□□□□ -0.71
SMARCD3-212ENST00000485610 H3BQ85 93 aa10.62□□□□□ -0.71
SMARCD3-212ENST00000485610 A0A1B0GV90 55 aa10.61□□□□□ -0.71
SMARCD3-212ENST00000485610 Q8N377 158 aa10.61□□□□□ -0.71
SMARCD3-212ENST00000485610 KRTAP1-4P0C5Y4 121 aa10.61□□□□□ -0.71
SMARCD3-212ENST00000485610 TMEM256-PLSCR3K7ERE1 68 aa10.59□□□□□ -0.71
SMARCD3-212ENST00000485610 FAM229BQ4G0N7 80 aa10.59□□□□□ -0.71
SMARCD3-212ENST00000485610 HERC2O95714 4834 aa10.58□□□□□ -0.72
SMARCD3-212ENST00000485610 BAALC-AS2P0C853 105 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms