RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 C1orf137Q5JT78 98 aa10.84□□□□□ -0.67
CHMP3-207ENST00000485465 A0A1B0GWB2 263 aa10.83□□□□□ -0.68
CHMP3-207ENST00000485465 BCE1O60756 84 aa10.82□□□□□ -0.68
CHMP3-207ENST00000485465 SPRR1AP35321 89 aa10.82□□□□□ -0.68
CHMP3-207ENST00000485465 Q8N1X5 172 aa10.82□□□□□ -0.68
CHMP3-207ENST00000485465 KRTAP17-1Q9BYP8 105 aa10.82□□□□□ -0.68
CHMP3-207ENST00000485465 PRO1854Q9UHT4 67 aa10.82□□□□□ -0.68
CHMP3-207ENST00000485465 FAT1Q14517 4588 aa10.81□□□□□ -0.68
CHMP3-207ENST00000485465 K7ERJ3 54 aa10.81□□□□□ -0.68
CHMP3-207ENST00000485465 ZNF73O43830 326 aaPredicted RBP10.81□□□□□ -0.68
CHMP3-207ENST00000485465 VPS13BQ7Z7G8 4022 aa10.8□□□□□ -0.68
CHMP3-207ENST00000485465 PCP4L1A6NKN8 68 aa10.8□□□□□ -0.68
CHMP3-207ENST00000485465 PLA2G1BP04054 148 aaKnown RBP10.8□□□□□ -0.68
CHMP3-207ENST00000485465 Q5VSD8 79 aa10.8□□□□□ -0.68
CHMP3-207ENST00000485465 SMIM11BQ8TCY0 68 aa10.8□□□□□ -0.68
CHMP3-207ENST00000485465 KRTAP4-16G5E9R7 235 aaPredicted RBP10.79□□□□□ -0.68
CHMP3-207ENST00000485465 H7C2G1 150 aa10.79□□□□□ -0.68
CHMP3-207ENST00000485465 KRTAP10-4P60372 401 aaPredicted RBP10.79□□□□□ -0.68
CHMP3-207ENST00000485465 IGLV7-43P04211 117 aa10.78□□□□□ -0.68
CHMP3-207ENST00000485465 BATFQ16520 125 aa10.78□□□□□ -0.68
CHMP3-207ENST00000485465 DIRC1Q969H9 104 aa10.78□□□□□ -0.68
CHMP3-207ENST00000485465 ETDCA0A1B0GVM5 59 aa10.77□□□□□ -0.69
CHMP3-207ENST00000485465 C6orf99Q4VX62 202 aa10.77□□□□□ -0.69
CHMP3-207ENST00000485465 FAM19A1Q7Z5A9 133 aa10.77□□□□□ -0.69
CHMP3-207ENST00000485465 UBE2AP49459 152 aa10.76□□□□□ -0.69
CHMP3-207ENST00000485465 B5MCH6 92 aa10.75□□□□□ -0.69
CHMP3-207ENST00000485465 RPL28P46779 137 aaKnown RBP10.75□□□□□ -0.69
CHMP3-207ENST00000485465 PRLHP81277 87 aa10.74□□□□□ -0.69
CHMP3-207ENST00000485465 Q1RN00 199 aa10.74□□□□□ -0.69
CHMP3-207ENST00000485465 KRTAP13-1Q8IUC0 172 aa10.74□□□□□ -0.69
CHMP3-207ENST00000485465 TRBV7-6A0A0J9YX20 115 aa10.73□□□□□ -0.69
CHMP3-207ENST00000485465 H0Y9J4 135 aa10.73□□□□□ -0.69
CHMP3-207ENST00000485465 ZNF861PO60384 105 aa10.73□□□□□ -0.69
CHMP3-207ENST00000485465 HERC2O95714 4834 aa10.73□□□□□ -0.69
CHMP3-207ENST00000485465 COX7BP24311 80 aa10.72□□□□□ -0.69
CHMP3-207ENST00000485465 SNHG12Q9BXW3 62 aa10.72□□□□□ -0.69
CHMP3-207ENST00000485465 TSPAN13O95857 204 aa10.71□□□□□ -0.69
CHMP3-207ENST00000485465 ELOF1P60002 83 aaKnown RBP10.71□□□□□ -0.69
CHMP3-207ENST00000485465 Q6ZRX8 168 aa10.71□□□□□ -0.69
CHMP3-207ENST00000485465 VAMP3Q15836 100 aa10.7□□□□□ -0.7
CHMP3-207ENST00000485465 SPINK6Q6UWN8 80 aa10.68□□□□□ -0.7
CHMP3-207ENST00000485465 Q9BRP9 147 aa10.68□□□□□ -0.7
CHMP3-207ENST00000485465 TRIAP1O43715 76 aa10.67□□□□□ -0.7
CHMP3-207ENST00000485465 PSMB2P49721 201 aa10.67□□□□□ -0.7
CHMP3-207ENST00000485465 SMCR5Q8TEV8 140 aa10.67□□□□□ -0.7
CHMP3-207ENST00000485465 HIGD2AQ9BW72 106 aa10.67□□□□□ -0.7
CHMP3-207ENST00000485465 PKHD1L1Q86WI1 4243 aa10.66□□□□□ -0.7
CHMP3-207ENST00000485465 SRRM2Q9UQ35 2752 aaKnown RBP10.65□□□□□ -0.7
CHMP3-207ENST00000485465 INAFM2P0DMQ5 153 aa10.65□□□□□ -0.7
CHMP3-207ENST00000485465 KRTAP4-5Q9BYR2 181 aa10.65□□□□□ -0.7
CHMP3-207ENST00000485465 DHRS4-AS1Q9P1J3 65 aa10.65□□□□□ -0.7
CHMP3-207ENST00000485465 H0YGX0 51 aa10.64□□□□□ -0.71
CHMP3-207ENST00000485465 ERC2-IT1O76042 136 aa10.63□□□□□ -0.71
CHMP3-207ENST00000485465 LINC00575Q6W349 94 aa10.63□□□□□ -0.71
CHMP3-207ENST00000485465 TAX1BP3O14907 124 aa10.62□□□□□ -0.71
CHMP3-207ENST00000485465 COX6CP09669 75 aa10.62□□□□□ -0.71
CHMP3-207ENST00000485465 COL5A1-AS1Q5SY13 56 aa10.62□□□□□ -0.71
CHMP3-207ENST00000485465 NAA38Q9BRA0 125 aaKnown RBP10.61□□□□□ -0.71
CHMP3-207ENST00000485465 SLC25A20O43772 301 aa10.6□□□□□ -0.71
CHMP3-207ENST00000485465 SCGB1C2P0DMR2 95 aa10.59□□□□□ -0.71
CHMP3-207ENST00000485465 hADV29S1A0JD25 119 aa10.58□□□□□ -0.72
CHMP3-207ENST00000485465 C9orf118A6NHY6 69 aa10.58□□□□□ -0.72
CHMP3-207ENST00000485465 FAM218AQ96MZ4 157 aa10.58□□□□□ -0.72
CHMP3-207ENST00000485465 H3BUT2 72 aa10.57□□□□□ -0.72
CHMP3-207ENST00000485465 CLEC2BQ92478 149 aa10.57□□□□□ -0.72
CHMP3-207ENST00000485465 ZNF706Q9Y5V0 76 aaPredicted RBP10.56□□□□□ -0.72
CHMP3-207ENST00000485465 SNCGO76070 127 aa10.55□□□□□ -0.72
CHMP3-207ENST00000485465 ST20-AS1Q8NBB2 130 aa10.55□□□□□ -0.72
CHMP3-207ENST00000485465 SPRR4Q96PI1 79 aa10.55□□□□□ -0.72
CHMP3-207ENST00000485465 A0A1B0GX51 115 aa10.54□□□□□ -0.72
CHMP3-207ENST00000485465 KRTAP1-4P0C5Y4 121 aa10.52□□□□□ -0.73
CHMP3-207ENST00000485465 LYRM7Q5U5X0 104 aa10.52□□□□□ -0.73
CHMP3-207ENST00000485465 A0A1W2PPM0 123 aa10.51□□□□□ -0.73
CHMP3-207ENST00000485465 GAGE2AQ6NT46 116 aa10.51□□□□□ -0.73
CHMP3-207ENST00000485465 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.51□□□□□ -0.73
CHMP3-207ENST00000485465 Q6ZQY7 126 aa10.51□□□□□ -0.73
CHMP3-207ENST00000485465 LST1O00453 97 aa10.5□□□□□ -0.73
CHMP3-207ENST00000485465 ANAPC11Q9NYG5 84 aa10.5□□□□□ -0.73
CHMP3-207ENST00000485465 ABCA13Q86UQ4 5058 aa10.5□□□□□ -0.73
CHMP3-207ENST00000485465 TCL1BO95988 128 aa10.49□□□□□ -0.73
CHMP3-207ENST00000485465 LINC00483Q53H64 154 aa10.49□□□□□ -0.73
CHMP3-207ENST00000485465 DEFB105AQ8NG35 78 aa10.49□□□□□ -0.73
CHMP3-207ENST00000485465 IGLV5-48A0A075B6I7 105 aa10.48□□□□□ -0.73
CHMP3-207ENST00000485465 FABP2P12104 132 aa10.48□□□□□ -0.73
CHMP3-207ENST00000485465 LINC01547P58512 204 aaPredicted RBP10.48□□□□□ -0.73
CHMP3-207ENST00000485465 TEX49A0A1B0GTD5 131 aa10.47□□□□□ -0.73
CHMP3-207ENST00000485465 TRACP01848 142 aa10.47□□□□□ -0.73
CHMP3-207ENST00000485465 SPRR1BP22528 89 aa10.47□□□□□ -0.73
CHMP3-207ENST00000485465 ATXN8Q156A1 80 aa10.47□□□□□ -0.73
CHMP3-207ENST00000485465 TRBV20-1A0A075B6N2 111 aa10.46□□□□□ -0.73
CHMP3-207ENST00000485465 DNAL4O96015 105 aa10.46□□□□□ -0.73
CHMP3-207ENST00000485465 FAM229BQ4G0N7 80 aa10.46□□□□□ -0.73
CHMP3-207ENST00000485465 OCIAD2Q56VL3 154 aa10.45□□□□□ -0.74
CHMP3-207ENST00000485465 Q8N377 158 aa10.45□□□□□ -0.74
CHMP3-207ENST00000485465 LINC01600Q96MT4 127 aa10.44□□□□□ -0.74
CHMP3-207ENST00000485465 CRYGAP11844 174 aa10.43□□□□□ -0.74
CHMP3-207ENST00000485465 FAT3Q8TDW7 4589 aa10.42□□□□□ -0.74
CHMP3-207ENST00000485465 A0A087X002 238 aa10.42□□□□□ -0.74
CHMP3-207ENST00000485465 PPDPFLQ8WWR9 84 aa10.42□□□□□ -0.74
CHMP3-207ENST00000485465 OXTP01178 125 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms