RNA–Protein interactions for RNA: ENST00000484620.1

PDLIM4-207, Transcript of PDZ and LIM domain 4, humanhuman

TSL 5

Gene PDLIM4, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-207ENST00000484620 SPRR1AP35321 89 aa11.7□□□□□ -0.54
PDLIM4-207ENST00000484620 RPL13AP40429 203 aaKnown RBP11.7□□□□□ -0.54
PDLIM4-207ENST00000484620 BVES-AS1Q5T3Y7 98 aa11.7□□□□□ -0.54
PDLIM4-207ENST00000484620 FAM19A1Q7Z5A9 133 aa11.7□□□□□ -0.54
PDLIM4-207ENST00000484620 ETDCA0A1B0GVM5 59 aa11.69□□□□□ -0.54
PDLIM4-207ENST00000484620 ZNF73O43830 326 aaPredicted RBP11.69□□□□□ -0.54
PDLIM4-207ENST00000484620 UBE2AP49459 152 aa11.69□□□□□ -0.54
PDLIM4-207ENST00000484620 KRTAP10-4P60372 401 aaPredicted RBP11.69□□□□□ -0.54
PDLIM4-207ENST00000484620 NHP2Q9NX24 153 aaKnown RBP11.69□□□□□ -0.54
PDLIM4-207ENST00000484620 FAT1Q14517 4588 aa11.69□□□□□ -0.54
PDLIM4-207ENST00000484620 HINT1P49773 126 aaPredicted RBP11.68□□□□□ -0.54
PDLIM4-207ENST00000484620 DIRC1Q969H9 104 aa11.68□□□□□ -0.54
PDLIM4-207ENST00000484620 KRTAP17-1Q9BYP8 105 aa11.68□□□□□ -0.54
PDLIM4-207ENST00000484620 VPS13BQ7Z7G8 4022 aa11.67□□□□□ -0.54
PDLIM4-207ENST00000484620 RPL28P46779 137 aaKnown RBP11.67□□□□□ -0.54
PDLIM4-207ENST00000484620 PRO1854Q9UHT4 67 aa11.67□□□□□ -0.54
PDLIM4-207ENST00000484620 KRTAP4-16G5E9R7 235 aaPredicted RBP11.65□□□□□ -0.54
PDLIM4-207ENST00000484620 ZNF861PO60384 105 aa11.65□□□□□ -0.54
PDLIM4-207ENST00000484620 SMIM11BQ8TCY0 68 aa11.65□□□□□ -0.54
PDLIM4-207ENST00000484620 A0A1B0GWB2 263 aa11.64□□□□□ -0.55
PDLIM4-207ENST00000484620 PRLHP81277 87 aa11.64□□□□□ -0.55
PDLIM4-207ENST00000484620 C6orf99Q4VX62 202 aa11.64□□□□□ -0.55
PDLIM4-207ENST00000484620 H0Y9J4 135 aa11.63□□□□□ -0.55
PDLIM4-207ENST00000484620 H7C2G1 150 aa11.63□□□□□ -0.55
PDLIM4-207ENST00000484620 Q1RN00 199 aa11.63□□□□□ -0.55
PDLIM4-207ENST00000484620 B5MCH6 92 aa11.62□□□□□ -0.55
PDLIM4-207ENST00000484620 K7ERJ3 54 aa11.62□□□□□ -0.55
PDLIM4-207ENST00000484620 SPINK6Q6UWN8 80 aa11.62□□□□□ -0.55
PDLIM4-207ENST00000484620 KRTAP13-1Q8IUC0 172 aa11.62□□□□□ -0.55
PDLIM4-207ENST00000484620 TRBV7-6A0A0J9YX20 115 aa11.61□□□□□ -0.55
PDLIM4-207ENST00000484620 Q6ZRX8 168 aa11.61□□□□□ -0.55
PDLIM4-207ENST00000484620 COX7BP24311 80 aa11.6□□□□□ -0.55
PDLIM4-207ENST00000484620 VAMP3Q15836 100 aa11.6□□□□□ -0.55
PDLIM4-207ENST00000484620 ELOF1P60002 83 aaKnown RBP11.58□□□□□ -0.56
PDLIM4-207ENST00000484620 BATFQ16520 125 aa11.58□□□□□ -0.56
PDLIM4-207ENST00000484620 HIGD2AQ9BW72 106 aa11.58□□□□□ -0.56
PDLIM4-207ENST00000484620 KRTAP4-5Q9BYR2 181 aa11.57□□□□□ -0.56
PDLIM4-207ENST00000484620 PCP4L1A6NKN8 68 aa11.56□□□□□ -0.56
PDLIM4-207ENST00000484620 INAFM2P0DMQ5 153 aa11.55□□□□□ -0.56
PDLIM4-207ENST00000484620 DHRS4-AS1Q9P1J3 65 aa11.54□□□□□ -0.56
PDLIM4-207ENST00000484620 SRRM2Q9UQ35 2752 aaKnown RBP11.54□□□□□ -0.56
PDLIM4-207ENST00000484620 TSPAN13O95857 204 aa11.53□□□□□ -0.56
PDLIM4-207ENST00000484620 SMCR5Q8TEV8 140 aa11.53□□□□□ -0.56
PDLIM4-207ENST00000484620 Q9BRP9 147 aa11.53□□□□□ -0.56
PDLIM4-207ENST00000484620 PSMB2P49721 201 aa11.52□□□□□ -0.57
PDLIM4-207ENST00000484620 PKHD1L1Q86WI1 4243 aa11.51□□□□□ -0.57
PDLIM4-207ENST00000484620 H0YGX0 51 aa11.5□□□□□ -0.57
PDLIM4-207ENST00000484620 SLC25A20O43772 301 aa11.5□□□□□ -0.57
PDLIM4-207ENST00000484620 TRIAP1O43715 76 aa11.49□□□□□ -0.57
PDLIM4-207ENST00000484620 COX6CP09669 75 aa11.49□□□□□ -0.57
PDLIM4-207ENST00000484620 ZNF706Q9Y5V0 76 aaPredicted RBP11.49□□□□□ -0.57
PDLIM4-207ENST00000484620 ERC2-IT1O76042 136 aa11.47□□□□□ -0.57
PDLIM4-207ENST00000484620 LINC00575Q6W349 94 aa11.47□□□□□ -0.57
PDLIM4-207ENST00000484620 SNHG12Q9BXW3 62 aa11.47□□□□□ -0.57
PDLIM4-207ENST00000484620 SNCGO76070 127 aa11.46□□□□□ -0.57
PDLIM4-207ENST00000484620 hADV29S1A0JD25 119 aa11.44□□□□□ -0.58
PDLIM4-207ENST00000484620 SCGB1C2P0DMR2 95 aa11.43□□□□□ -0.58
PDLIM4-207ENST00000484620 SPRR4Q96PI1 79 aa11.43□□□□□ -0.58
PDLIM4-207ENST00000484620 ABCA13Q86UQ4 5058 aa11.41□□□□□ -0.58
PDLIM4-207ENST00000484620 COL5A1-AS1Q5SY13 56 aa11.41□□□□□ -0.58
PDLIM4-207ENST00000484620 A0A1B0GX51 115 aa11.4□□□□□ -0.58
PDLIM4-207ENST00000484620 KRTAP1-4P0C5Y4 121 aa11.4□□□□□ -0.58
PDLIM4-207ENST00000484620 LYRM7Q5U5X0 104 aa11.39□□□□□ -0.59
PDLIM4-207ENST00000484620 GAGE2AQ6NT46 116 aa11.39□□□□□ -0.59
PDLIM4-207ENST00000484620 ST20-AS1Q8NBB2 130 aa11.39□□□□□ -0.59
PDLIM4-207ENST00000484620 NAA38Q9BRA0 125 aaKnown RBP11.39□□□□□ -0.59
PDLIM4-207ENST00000484620 PCLOQ9Y6V0 5065 aa11.39□□□□□ -0.59
PDLIM4-207ENST00000484620 TAX1BP3O14907 124 aa11.38□□□□□ -0.59
PDLIM4-207ENST00000484620 CLEC2BQ92478 149 aa11.38□□□□□ -0.59
PDLIM4-207ENST00000484620 FAM218AQ96MZ4 157 aa11.38□□□□□ -0.59
PDLIM4-207ENST00000484620 C9orf118A6NHY6 69 aa11.37□□□□□ -0.59
PDLIM4-207ENST00000484620 FAM229BQ4G0N7 80 aa11.37□□□□□ -0.59
PDLIM4-207ENST00000484620 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.37□□□□□ -0.59
PDLIM4-207ENST00000484620 FLG2Q5D862 2391 aaPredicted RBP11.36□□□□□ -0.59
PDLIM4-207ENST00000484620 H3BUT2 72 aa11.36□□□□□ -0.59
PDLIM4-207ENST00000484620 OXTP01178 125 aa11.36□□□□□ -0.59
PDLIM4-207ENST00000484620 LINC00483Q53H64 154 aa11.36□□□□□ -0.59
PDLIM4-207ENST00000484620 Q6ZQY7 126 aa11.36□□□□□ -0.59
PDLIM4-207ENST00000484620 DEFB105AQ8NG35 78 aa11.35□□□□□ -0.59
PDLIM4-207ENST00000484620 LINC01600Q96MT4 127 aa11.35□□□□□ -0.59
PDLIM4-207ENST00000484620 TEX49A0A1B0GTD5 131 aa11.34□□□□□ -0.59
PDLIM4-207ENST00000484620 DNAL4O96015 105 aa11.34□□□□□ -0.59
PDLIM4-207ENST00000484620 CRYGAP11844 174 aa11.34□□□□□ -0.59
PDLIM4-207ENST00000484620 ANAPC11Q9NYG5 84 aa11.34□□□□□ -0.59
PDLIM4-207ENST00000484620 IGLV5-48A0A075B6I7 105 aa11.33□□□□□ -0.6
PDLIM4-207ENST00000484620 SPRR1BP22528 89 aa11.33□□□□□ -0.6
PDLIM4-207ENST00000484620 LST1O00453 97 aa11.32□□□□□ -0.6
PDLIM4-207ENST00000484620 OCIAD2Q56VL3 154 aa11.32□□□□□ -0.6
PDLIM4-207ENST00000484620 GHRHP01286 108 aa11.31□□□□□ -0.6
PDLIM4-207ENST00000484620 PRR26Q8N8Z3 221 aa11.31□□□□□ -0.6
PDLIM4-207ENST00000484620 KRTAP29-1A8MX34 341 aaPredicted RBP11.3□□□□□ -0.6
PDLIM4-207ENST00000484620 TRACP01848 142 aa11.3□□□□□ -0.6
PDLIM4-207ENST00000484620 LINC01547P58512 204 aaPredicted RBP11.3□□□□□ -0.6
PDLIM4-207ENST00000484620 ATXN8Q156A1 80 aa11.3□□□□□ -0.6
PDLIM4-207ENST00000484620 A0A087X002 238 aa11.29□□□□□ -0.6
PDLIM4-207ENST00000484620 A0A1W2PPM0 123 aa11.29□□□□□ -0.6
PDLIM4-207ENST00000484620 FABP2P12104 132 aa11.29□□□□□ -0.6
PDLIM4-207ENST00000484620 PPDPFLQ8WWR9 84 aa11.29□□□□□ -0.6
PDLIM4-207ENST00000484620 LAMTOR3Q9UHA4 124 aa11.29□□□□□ -0.6
PDLIM4-207ENST00000484620 TRBV20-1A0A075B6N2 111 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms