RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 FAT3Q8TDW7 4589 aa2.76□□□□□ -1.97
UBR3-210ENST00000484596 VPS13BQ7Z7G8 4022 aa2.76□□□□□ -1.97
UBR3-210ENST00000484596 HMCN2Q8NDA2 5059 aa2.75□□□□□ -1.97
UBR3-210ENST00000484596 TRAV10A0A0B4J240 114 aa2.75□□□□□ -1.97
UBR3-210ENST00000484596 SFT2D2O95562 160 aa2.75□□□□□ -1.97
UBR3-210ENST00000484596 CYB5AP00167 134 aa2.75□□□□□ -1.97
UBR3-210ENST00000484596 ATP5EP56381 51 aaPredicted RBP2.75□□□□□ -1.97
UBR3-210ENST00000484596 LCE6AA0A183 80 aa2.74□□□□□ -1.97
UBR3-210ENST00000484596 IGLC7A0M8Q6 106 aa2.74□□□□□ -1.97
UBR3-210ENST00000484596 ASIPP42127 132 aa2.74□□□□□ -1.97
UBR3-210ENST00000484596 DEFB136Q30KP8 78 aa2.74□□□□□ -1.97
UBR3-210ENST00000484596 Q8N6K4 173 aa2.74□□□□□ -1.97
UBR3-210ENST00000484596 C5orf56Q8N8D9 126 aa2.74□□□□□ -1.97
UBR3-210ENST00000484596 TMEM254Q8TBM7 123 aa2.74□□□□□ -1.97
UBR3-210ENST00000484596 MYOZ3Q8TDC0 251 aa2.74□□□□□ -1.97
UBR3-210ENST00000484596 HILPDAQ9Y5L2 63 aa2.74□□□□□ -1.97
UBR3-210ENST00000484596 TCRBV4S1A1TA0A5B7 111 aa2.73□□□□□ -1.97
UBR3-210ENST00000484596 F8W1H4 67 aa2.73□□□□□ -1.97
UBR3-210ENST00000484596 H3BSH0 61 aa2.73□□□□□ -1.97
UBR3-210ENST00000484596 ERC2-IT1O76042 136 aa2.73□□□□□ -1.97
UBR3-210ENST00000484596 FAUP35544 74 aaKnown RBP2.73□□□□□ -1.97
UBR3-210ENST00000484596 Q1T7F1 81 aa2.73□□□□□ -1.97
UBR3-210ENST00000484596 MINOS1Q5TGZ0 78 aa2.73□□□□□ -1.97
UBR3-210ENST00000484596 FAM213BQ8TBF2 198 aa2.73□□□□□ -1.97
UBR3-210ENST00000484596 CYSTM1Q9H1C7 97 aa2.73□□□□□ -1.97
UBR3-210ENST00000484596 TRAV12-1A0A0B4J245 112 aa2.72□□□□□ -1.97
UBR3-210ENST00000484596 TRBV7-7A0A0K0K1E9 115 aa2.72□□□□□ -1.97
UBR3-210ENST00000484596 EDDM3BP56851 147 aa2.72□□□□□ -1.97
UBR3-210ENST00000484596 SMIM11AP58511 58 aa2.72□□□□□ -1.97
UBR3-210ENST00000484596 DEFB121Q5J5C9 76 aa2.72□□□□□ -1.97
UBR3-210ENST00000484596 KRTAP26-1Q6PEX3 210 aa2.72□□□□□ -1.97
UBR3-210ENST00000484596 HEPN1Q6WQI6 88 aa2.72□□□□□ -1.97
UBR3-210ENST00000484596 DEFB107AQ8IZN7 70 aa2.72□□□□□ -1.97
UBR3-210ENST00000484596 SPTSSBQ8NFR3 76 aa2.72□□□□□ -1.97
UBR3-210ENST00000484596 LEAP2Q969E1 77 aa2.72□□□□□ -1.97
UBR3-210ENST00000484596 S100A16Q96FQ6 103 aaKnown RBP2.72□□□□□ -1.97
UBR3-210ENST00000484596 S100A13Q99584 98 aa2.72□□□□□ -1.97
UBR3-210ENST00000484596 R4GMQ9 66 aa2.72□□□□□ -1.97
UBR3-210ENST00000484596 C2orf70A6NJV1 201 aa2.71□□□□□ -1.98
UBR3-210ENST00000484596 APOC3P02656 99 aa2.71□□□□□ -1.98
UBR3-210ENST00000484596 TRAPPC2P0DI81 140 aa2.71□□□□□ -1.98
UBR3-210ENST00000484596 TRAPPC2BP0DI82 140 aa2.71□□□□□ -1.98
UBR3-210ENST00000484596 C9orf116Q5BN46 136 aaPredicted RBP2.71□□□□□ -1.98
UBR3-210ENST00000484596 C15orf53Q8NAA6 179 aa2.71□□□□□ -1.98
UBR3-210ENST00000484596 MRPL35Q9NZE8 188 aaKnown RBP2.71□□□□□ -1.98
UBR3-210ENST00000484596 UQCR10Q9UDW1 63 aa2.71□□□□□ -1.98
UBR3-210ENST00000484596 PKHD1L1Q86WI1 4243 aa2.71□□□□□ -1.98
UBR3-210ENST00000484596 LRP1Q07954 4544 aaKnown RBP2.7□□□□□ -1.98
UBR3-210ENST00000484596 SEC11AP67812 179 aa2.7□□□□□ -1.98
UBR3-210ENST00000484596 ELOBQ15370 118 aa2.7□□□□□ -1.98
UBR3-210ENST00000484596 KRTAP13-4Q3LI77 160 aa2.7□□□□□ -1.98
UBR3-210ENST00000484596 ZNF833PQ6ZTB9 187 aa2.7□□□□□ -1.98
UBR3-210ENST00000484596 UBR4Q5T4S7 5183 aa2.7□□□□□ -1.98
UBR3-210ENST00000484596 G3V318 75 aa2.69□□□□□ -1.98
UBR3-210ENST00000484596 ZNF137PP52743 207 aa2.69□□□□□ -1.98
UBR3-210ENST00000484596 DEFA5Q01523 94 aa2.69□□□□□ -1.98
UBR3-210ENST00000484596 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.69□□□□□ -1.98
UBR3-210ENST00000484596 TRAV2A0A0B4J234 112 aa2.68□□□□□ -1.98
UBR3-210ENST00000484596 HCG22E2RYF7 251 aa2.68□□□□□ -1.98
UBR3-210ENST00000484596 ATOX1O00244 68 aa2.68□□□□□ -1.98
UBR3-210ENST00000484596 PDCD5O14737 125 aa2.68□□□□□ -1.98
UBR3-210ENST00000484596 PIGYQ3MUY2 71 aa2.68□□□□□ -1.98
UBR3-210ENST00000484596 PCOTHQ58A44 107 aa2.68□□□□□ -1.98
UBR3-210ENST00000484596 RPL7L1Q6DKI1 246 aaKnown RBP2.68□□□□□ -1.98
UBR3-210ENST00000484596 XAF1Q6GPH4 301 aa2.68□□□□□ -1.98
UBR3-210ENST00000484596 LINC00322Q6ZN03 302 aaPredicted RBP2.68□□□□□ -1.98
UBR3-210ENST00000484596 COA5Q86WW8 74 aa2.68□□□□□ -1.98
UBR3-210ENST00000484596 C4orf3Q8WVX3 66 aa2.68□□□□□ -1.98
UBR3-210ENST00000484596 TRAV13-2A0A0B4J235 113 aa2.67□□□□□ -1.98
UBR3-210ENST00000484596 NDUFA3O95167 84 aa2.67□□□□□ -1.98
UBR3-210ENST00000484596 KRTAP12-1P59990 96 aa2.67□□□□□ -1.98
UBR3-210ENST00000484596 LYPD5Q6UWN5 251 aa2.67□□□□□ -1.98
UBR3-210ENST00000484596 Q6ZRN7 208 aaPredicted RBP2.67□□□□□ -1.98
UBR3-210ENST00000484596 ZNF431Q8TF32 576 aaPredicted RBP2.67□□□□□ -1.98
UBR3-210ENST00000484596 SMCO4Q9NRQ5 59 aa2.67□□□□□ -1.98
UBR3-210ENST00000484596 TRBV10-3A0A0K0K1G6 114 aa2.66□□□□□ -1.98
UBR3-210ENST00000484596 GNGT1P63211 74 aa2.66□□□□□ -1.98
UBR3-210ENST00000484596 CSAG1Q6PB30 78 aa2.66□□□□□ -1.98
UBR3-210ENST00000484596 SERP2Q8N6R1 65 aa2.66□□□□□ -1.98
UBR3-210ENST00000484596 PPDPFLQ8WWR9 84 aa2.66□□□□□ -1.98
UBR3-210ENST00000484596 CACFD1Q9UGQ2 172 aa2.66□□□□□ -1.98
UBR3-210ENST00000484596 SPCS1Q9Y6A9 102 aa2.66□□□□□ -1.98
UBR3-210ENST00000484596 CRYM-AS1A6NIL9 109 aa2.65□□□□□ -1.99
UBR3-210ENST00000484596 SAA2P0DJI9 122 aaPredicted RBP2.65□□□□□ -1.99
UBR3-210ENST00000484596 PDE6HQ13956 83 aa2.65□□□□□ -1.99
UBR3-210ENST00000484596 WFDC2Q14508 124 aa2.65□□□□□ -1.99
UBR3-210ENST00000484596 ETDBQ3ZM63 59 aa2.65□□□□□ -1.99
UBR3-210ENST00000484596 C2orf82Q6UX34 121 aa2.65□□□□□ -1.99
UBR3-210ENST00000484596 OR10AG1Q8NH19 301 aa2.65□□□□□ -1.99
UBR3-210ENST00000484596 IFI27L1Q96BM0 104 aa2.65□□□□□ -1.99
UBR3-210ENST00000484596 FAM103A1Q9BTL3 118 aaKnown RBP2.65□□□□□ -1.99
UBR3-210ENST00000484596 WFDC10AQ9H1F0 79 aa2.65□□□□□ -1.99
UBR3-210ENST00000484596 PIGBOS1A0A0B4J2F0 54 aa2.64□□□□□ -1.99
UBR3-210ENST00000484596 NAP1L6A6NFF2 107 aa2.64□□□□□ -1.99
UBR3-210ENST00000484596 H3BRM9 83 aa2.64□□□□□ -1.99
UBR3-210ENST00000484596 SNRPGP62308 76 aaKnown RBP2.64□□□□□ -1.99
UBR3-210ENST00000484596 CNBPP62633 177 aaKnown RBP2.64□□□□□ -1.99
UBR3-210ENST00000484596 HMGN3Q15651 99 aa2.64□□□□□ -1.99
UBR3-210ENST00000484596 C1orf137Q5JT78 98 aa2.64□□□□□ -1.99
UBR3-210ENST00000484596 LIMD2Q9BT23 127 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms