RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 URB1O60287 2271 aaKnown RBP0.52□□□□□ -2.33
VPS13A-211ENST00000484581 VWFP04275 2813 aa0.51□□□□□ -2.33
VPS13A-211ENST00000484581 LRRC37AA6NMS7 1700 aa0.51□□□□□ -2.33
VPS13A-211ENST00000484581 SPRR1AP35321 89 aa0.51□□□□□ -2.33
VPS13A-211ENST00000484581 H1FX-AS1Q4G0G2 97 aa0.51□□□□□ -2.33
VPS13A-211ENST00000484581 FSIP2Q5CZC0 6907 aa0.51□□□□□ -2.33
VPS13A-211ENST00000484581 ERICH3Q5RHP9 1530 aa0.51□□□□□ -2.33
VPS13A-211ENST00000484581 MAGI3Q5TCQ9 1506 aa0.51□□□□□ -2.33
VPS13A-211ENST00000484581 ASXL1Q8IXJ9 1541 aa0.51□□□□□ -2.33
VPS13A-211ENST00000484581 MADDQ8WXG6 1647 aa0.51□□□□□ -2.33
VPS13A-211ENST00000484581 PTPN23Q9H3S7 1636 aa0.51□□□□□ -2.33
VPS13A-211ENST00000484581 U3KQA8 63 aa0.51□□□□□ -2.33
VPS13A-211ENST00000484581 WDFY4Q6ZS81 3184 aa0.51□□□□□ -2.33
VPS13A-211ENST00000484581 TENM4Q6N022 2769 aa0.51□□□□□ -2.33
VPS13A-211ENST00000484581 RGPD2P0DJD1 1756 aa0.5□□□□□ -2.33
VPS13A-211ENST00000484581 RGPD1P0DJD0 1748 aa0.5□□□□□ -2.33
VPS13A-211ENST00000484581 PKD1L3Q7Z443 1732 aa0.5□□□□□ -2.33
VPS13A-211ENST00000484581 ZNF831Q5JPB2 1677 aa0.5□□□□□ -2.33
VPS13A-211ENST00000484581 LAMA2P24043 3122 aaKnown RBP0.5□□□□□ -2.33
VPS13A-211ENST00000484581 EFCAB5A4FU69 1503 aa0.5□□□□□ -2.33
VPS13A-211ENST00000484581 HFM1A2PYH4 1435 aa0.5□□□□□ -2.33
VPS13A-211ENST00000484581 NDUFA3O95167 84 aa0.5□□□□□ -2.33
VPS13A-211ENST00000484581 SFTA3P0C7M3 94 aa0.5□□□□□ -2.33
VPS13A-211ENST00000484581 HMGA1P17096 107 aaKnown RBP0.5□□□□□ -2.33
VPS13A-211ENST00000484581 LELP1Q5T871 98 aa0.5□□□□□ -2.33
VPS13A-211ENST00000484581 UBL5Q9BZL1 73 aa0.5□□□□□ -2.33
VPS13A-211ENST00000484581 USP9XQ93008 2570 aaPredicted RBP0.5□□□□□ -2.33
VPS13A-211ENST00000484581 SZT2Q5T011 3432 aa0.5□□□□□ -2.33
VPS13A-211ENST00000484581 PPRC1Q5VV67 1664 aaKnown RBP0.49□□□□□ -2.33
VPS13A-211ENST00000484581 MKI67P46013 3256 aaKnown RBP0.49□□□□□ -2.33
VPS13A-211ENST00000484581 MROH1Q8NDA8 1641 aa0.49□□□□□ -2.33
VPS13A-211ENST00000484581 CDC42BPGQ6DT37 1551 aa0.49□□□□□ -2.33
VPS13A-211ENST00000484581 ANKRD50Q9ULJ7 1429 aa0.49□□□□□ -2.33
VPS13A-211ENST00000484581 PDZD2O15018 2839 aa0.49□□□□□ -2.33
VPS13A-211ENST00000484581 COL6A5A8TX70 2615 aa0.49□□□□□ -2.33
VPS13A-211ENST00000484581 MUC2Q02817 5179 aa0.49□□□□□ -2.33
VPS13A-211ENST00000484581 SETD2Q9BYW2 2564 aaPredicted RBP0.49□□□□□ -2.33
VPS13A-211ENST00000484581 A0A087WWC5 75 aa0.49□□□□□ -2.33
VPS13A-211ENST00000484581 LOC730098B7Z3J9 87 aa0.49□□□□□ -2.33
VPS13A-211ENST00000484581 PHGR1C9JFL3 82 aa0.49□□□□□ -2.33
VPS13A-211ENST00000484581 C3orf79P0CE67 100 aa0.49□□□□□ -2.33
VPS13A-211ENST00000484581 CDKN2A-AS1Q9UH64 79 aa0.49□□□□□ -2.33
VPS13A-211ENST00000484581 MUC5ACP98088 5654 aa0.49□□□□□ -2.33
VPS13A-211ENST00000484581 SPTBN1Q01082 2364 aaKnown RBP0.49□□□□□ -2.33
VPS13A-211ENST00000484581 DIP2AQ14689 1571 aa0.49□□□□□ -2.33
VPS13A-211ENST00000484581 ZFHX4Q86UP3 3567 aa0.49□□□□□ -2.33
VPS13A-211ENST00000484581 RALGAPBQ86X10 1494 aa0.48□□□□□ -2.33
VPS13A-211ENST00000484581 FMN2Q9NZ56 1722 aa0.48□□□□□ -2.33
VPS13A-211ENST00000484581 MYO18BQ8IUG5 2567 aa0.48□□□□□ -2.33
VPS13A-211ENST00000484581 STAB1Q9NY15 2570 aa0.48□□□□□ -2.33
VPS13A-211ENST00000484581 LINC01549A6NIU2 74 aa0.48□□□□□ -2.33
VPS13A-211ENST00000484581 SPINK4O60575 86 aa0.48□□□□□ -2.33
VPS13A-211ENST00000484581 FCER1GP30273 86 aa0.48□□□□□ -2.33
VPS13A-211ENST00000484581 SMIM5Q71RC9 77 aa0.48□□□□□ -2.33
VPS13A-211ENST00000484581 REV3LO60673 3130 aa0.48□□□□□ -2.33
VPS13A-211ENST00000484581 FLNBO75369 2602 aaKnown RBP0.48□□□□□ -2.33
VPS13A-211ENST00000484581 CD163L1Q9NR16 1453 aa0.48□□□□□ -2.33
VPS13A-211ENST00000484581 TSC2P49815 1807 aa0.48□□□□□ -2.33
VPS13A-211ENST00000484581 LTN1O94822 1766 aa0.47□□□□□ -2.33
VPS13A-211ENST00000484581 PIEZO2Q9H5I5 2752 aa0.47□□□□□ -2.33
VPS13A-211ENST00000484581 ZC3H13Q5T200 1668 aaKnown RBP0.47□□□□□ -2.33
VPS13A-211ENST00000484581 HECTD1Q9ULT8 2610 aa0.47□□□□□ -2.33
VPS13A-211ENST00000484581 ABCA9Q8IUA7 1624 aa0.47□□□□□ -2.33
VPS13A-211ENST00000484581 LCE6AA0A183 80 aa0.47□□□□□ -2.33
VPS13A-211ENST00000484581 WFDC13Q8IUB5 93 aa0.47□□□□□ -2.33
VPS13A-211ENST00000484581 PRO3102Q9H379 93 aa0.47□□□□□ -2.33
VPS13A-211ENST00000484581 ANKHD1Q8IWZ3 2542 aaKnown RBP0.47□□□□□ -2.33
VPS13A-211ENST00000484581 CCDC168Q8NDH2 2452 aa0.47□□□□□ -2.33
VPS13A-211ENST00000484581 ITPR3Q14573 2671 aa0.47□□□□□ -2.33
VPS13A-211ENST00000484581 KIAA1109Q2LD37 5005 aa0.46□□□□□ -2.34
VPS13A-211ENST00000484581 GCN1Q92616 2671 aaKnown RBP0.46□□□□□ -2.34
VPS13A-211ENST00000484581 EYSQ5T1H1 3165 aa0.46□□□□□ -2.34
VPS13A-211ENST00000484581 NWD1Q149M9 1564 aa0.46□□□□□ -2.34
VPS13A-211ENST00000484581 IGSF10Q6WRI0 2623 aa0.46□□□□□ -2.34
VPS13A-211ENST00000484581 INO80Q9ULG1 1556 aaPredicted RBP0.46□□□□□ -2.34
VPS13A-211ENST00000484581 EPG5Q9HCE0 2579 aa0.46□□□□□ -2.34
VPS13A-211ENST00000484581 MRPL33O75394 65 aaKnown RBP0.46□□□□□ -2.34
VPS13A-211ENST00000484581 LINC00158P58513 81 aa0.46□□□□□ -2.34
VPS13A-211ENST00000484581 SCN11AQ9UI33 1791 aa0.46□□□□□ -2.34
VPS13A-211ENST00000484581 RICTORQ6R327 1708 aa0.46□□□□□ -2.34
VPS13A-211ENST00000484581 PREX1Q8TCU6 1659 aa0.46□□□□□ -2.34
VPS13A-211ENST00000484581 CELSR3Q9NYQ7 3312 aa0.46□□□□□ -2.34
VPS13A-211ENST00000484581 CSMD3Q7Z407 3707 aa0.46□□□□□ -2.34
VPS13A-211ENST00000484581 LRRK2Q5S007 2527 aa0.45□□□□□ -2.34
VPS13A-211ENST00000484581 ACACBO00763 2458 aa0.45□□□□□ -2.34
VPS13A-211ENST00000484581 VCANP13611 3396 aa0.45□□□□□ -2.34
VPS13A-211ENST00000484581 NSD1Q96L73 2696 aaPredicted RBP0.45□□□□□ -2.34
VPS13A-211ENST00000484581 POLR1AO95602 1720 aaPredicted RBP0.45□□□□□ -2.34
VPS13A-211ENST00000484581 DOPEY1Q5JWR5 2465 aa0.45□□□□□ -2.34
VPS13A-211ENST00000484581 FAT4Q6V0I7 4981 aa0.45□□□□□ -2.34
VPS13A-211ENST00000484581 DOT1LQ8TEK3 1739 aa0.44□□□□□ -2.34
VPS13A-211ENST00000484581 AKAP13Q12802 2813 aa0.44□□□□□ -2.34
VPS13A-211ENST00000484581 FLNAP21333 2647 aaKnown RBP0.44□□□□□ -2.34
VPS13A-211ENST00000484581 CFAP43Q8NDM7 1665 aa0.44□□□□□ -2.34
VPS13A-211ENST00000484581 NBEAL2Q6ZNJ1 2754 aa0.44□□□□□ -2.34
VPS13A-211ENST00000484581 ETDCA0A1B0GVM5 59 aa0.44□□□□□ -2.34
VPS13A-211ENST00000484581 COX6B2Q6YFQ2 88 aa0.44□□□□□ -2.34
VPS13A-211ENST00000484581 CFAP54Q96N23 3096 aa0.44□□□□□ -2.34
VPS13A-211ENST00000484581 RGPD8O14715 1765 aaPredicted RBP0.44□□□□□ -2.34
VPS13A-211ENST00000484581 RGPD5Q99666 1765 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms