RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 PYGO1Q9Y3Y4 419 aa4.36□□□□□ -1.71
CSDE1-206ENST00000483030 TRBV30A0A0K0K1B3 111 aa4.35□□□□□ -1.71
CSDE1-206ENST00000483030 NDUFC2-KCTD14E9PQ53 114 aa4.35□□□□□ -1.71
CSDE1-206ENST00000483030 SNCGO76070 127 aa4.35□□□□□ -1.71
CSDE1-206ENST00000483030 MRPS36P82909 103 aaKnown RBP4.35□□□□□ -1.71
CSDE1-206ENST00000483030 FAM104BQ5XKR9 115 aa4.35□□□□□ -1.71
CSDE1-206ENST00000483030 SMIM7Q9BQ49 75 aa4.35□□□□□ -1.71
CSDE1-206ENST00000483030 A0A087X002 238 aa4.34□□□□□ -1.71
CSDE1-206ENST00000483030 FAM236AA0A1B0GUQ0 79 aa4.34□□□□□ -1.71
CSDE1-206ENST00000483030 FAM236BA0A1B0GV22 79 aa4.34□□□□□ -1.71
CSDE1-206ENST00000483030 A0A1B0GWB2 263 aa4.34□□□□□ -1.71
CSDE1-206ENST00000483030 ZNF727A8MUV8 499 aa4.34□□□□□ -1.71
CSDE1-206ENST00000483030 H3BMG7 143 aa4.34□□□□□ -1.71
CSDE1-206ENST00000483030 CKS2P33552 79 aa4.34□□□□□ -1.71
CSDE1-206ENST00000483030 LINC00242Q5T6M2 205 aa4.34□□□□□ -1.71
CSDE1-206ENST00000483030 TYMSOSQ8TAI1 123 aa4.34□□□□□ -1.71
CSDE1-206ENST00000483030 C22orf24Q9Y442 160 aa4.34□□□□□ -1.71
CSDE1-206ENST00000483030 V9GYV3 84 aa4.34□□□□□ -1.71
CSDE1-206ENST00000483030 FAT4Q6V0I7 4981 aa4.33□□□□□ -1.72
CSDE1-206ENST00000483030 NUPR1O60356 82 aa4.33□□□□□ -1.72
CSDE1-206ENST00000483030 CRYGAP11844 174 aa4.33□□□□□ -1.72
CSDE1-206ENST00000483030 SMIM2Q9BVW6 85 aa4.33□□□□□ -1.72
CSDE1-206ENST00000483030 EIF5A2Q9GZV4 153 aaKnown RBP4.33□□□□□ -1.72
CSDE1-206ENST00000483030 TRBV20-1A0A075B6N2 111 aa4.32□□□□□ -1.72
CSDE1-206ENST00000483030 D6R8Y8 96 aa4.32□□□□□ -1.72
CSDE1-206ENST00000483030 H3BUT2 72 aa4.32□□□□□ -1.72
CSDE1-206ENST00000483030 NPYP01303 97 aa4.32□□□□□ -1.72
CSDE1-206ENST00000483030 SLC25A34Q6PIV7 304 aa4.32□□□□□ -1.72
CSDE1-206ENST00000483030 Q75L30 129 aa4.32□□□□□ -1.72
CSDE1-206ENST00000483030 ANKRD29Q8N6D5 301 aa4.32□□□□□ -1.72
CSDE1-206ENST00000483030 PPDPFLQ8WWR9 84 aa4.32□□□□□ -1.72
CSDE1-206ENST00000483030 PRELID3AQ96N28 172 aa4.32□□□□□ -1.72
CSDE1-206ENST00000483030 RETNLBQ9BQ08 111 aa4.32□□□□□ -1.72
CSDE1-206ENST00000483030 GNB1LQ9BYB4 327 aa4.32□□□□□ -1.72
CSDE1-206ENST00000483030 XAGE1AQ9HD64 81 aa4.32□□□□□ -1.72
CSDE1-206ENST00000483030 ANAPC11Q9NYG5 84 aa4.32□□□□□ -1.72
CSDE1-206ENST00000483030 IGLV4-3A0A075B6K6 122 aa4.31□□□□□ -1.72
CSDE1-206ENST00000483030 SYS1-DBNDD2H3BUS1 97 aa4.31□□□□□ -1.72
CSDE1-206ENST00000483030 TRACP01848 142 aa4.31□□□□□ -1.72
CSDE1-206ENST00000483030 PRSS2P07478 247 aa4.31□□□□□ -1.72
CSDE1-206ENST00000483030 SRP19P09132 144 aaKnown RBP4.31□□□□□ -1.72
CSDE1-206ENST00000483030 IFI27P40305 119 aaPredicted RBP4.31□□□□□ -1.72
CSDE1-206ENST00000483030 RPL28P46779 137 aaKnown RBP4.31□□□□□ -1.72
CSDE1-206ENST00000483030 IMUPQ9GZP8 106 aa4.31□□□□□ -1.72
CSDE1-206ENST00000483030 TOMM7Q9P0U1 55 aa4.31□□□□□ -1.72
CSDE1-206ENST00000483030 SMIM27A0A1W2PRY6 76 aa4.3□□□□□ -1.72
CSDE1-206ENST00000483030 BCE1O60756 84 aa4.3□□□□□ -1.72
CSDE1-206ENST00000483030 RPL23P62829 140 aaKnown RBP4.3□□□□□ -1.72
CSDE1-206ENST00000483030 ZC2HC1BQ5TFG8 222 aa4.3□□□□□ -1.72
CSDE1-206ENST00000483030 PRR15Q8IV56 129 aa4.3□□□□□ -1.72
CSDE1-206ENST00000483030 TMEM141Q96I45 108 aa4.3□□□□□ -1.72
CSDE1-206ENST00000483030 RPL37AP8A6NKH3 93 aa4.29□□□□□ -1.72
CSDE1-206ENST00000483030 ETDBQ3ZM63 59 aa4.29□□□□□ -1.72
CSDE1-206ENST00000483030 KRTAP13-2Q52LG2 175 aa4.29□□□□□ -1.72
CSDE1-206ENST00000483030 COPS9Q8WXC6 57 aa4.29□□□□□ -1.72
CSDE1-206ENST00000483030 TP73-AS1Q9UF72 201 aa4.29□□□□□ -1.72
CSDE1-206ENST00000483030 IGLV7-46A0A075B6I9 117 aa4.28□□□□□ -1.72
CSDE1-206ENST00000483030 SMIM26A0A096LP01 95 aa4.28□□□□□ -1.72
CSDE1-206ENST00000483030 KRTAP9-7A8MTY7 169 aa4.28□□□□□ -1.72
CSDE1-206ENST00000483030 KRTDAPP60985 99 aa4.28□□□□□ -1.72
CSDE1-206ENST00000483030 TPRXLQ17RH7 258 aa4.28□□□□□ -1.72
CSDE1-206ENST00000483030 TMEM136Q6ZRR5 245 aa4.28□□□□□ -1.72
CSDE1-206ENST00000483030 LINC00304Q8N9R0 145 aa4.28□□□□□ -1.72
CSDE1-206ENST00000483030 LINC00167Q96N53 147 aa4.28□□□□□ -1.72
CSDE1-206ENST00000483030 TRAV9-1A0A075B6T8 112 aa4.27□□□□□ -1.73
CSDE1-206ENST00000483030 LOC389332A0A1B0GUA5 103 aa4.27□□□□□ -1.73
CSDE1-206ENST00000483030 A0A1B0GXF2 115 aa4.27□□□□□ -1.73
CSDE1-206ENST00000483030 SMIM13P0DJ93 91 aa4.27□□□□□ -1.73
CSDE1-206ENST00000483030 COX7CP15954 63 aa4.27□□□□□ -1.73
CSDE1-206ENST00000483030 LINC00173Q6ZV60 143 aa4.27□□□□□ -1.73
CSDE1-206ENST00000483030 Q8IZM0 81 aa4.27□□□□□ -1.73
CSDE1-206ENST00000483030 ORMDL3Q8N138 153 aa4.27□□□□□ -1.73
CSDE1-206ENST00000483030 AMELXQ99217 191 aa4.27□□□□□ -1.73
CSDE1-206ENST00000483030 PRO0461Q9UI25 63 aa4.27□□□□□ -1.73
CSDE1-206ENST00000483030 TRBV7-6A0A0J9YX20 115 aa4.26□□□□□ -1.73
CSDE1-206ENST00000483030 TRBV7-7A0A0K0K1E9 115 aa4.26□□□□□ -1.73
CSDE1-206ENST00000483030 F8VRH5 84 aa4.26□□□□□ -1.73
CSDE1-206ENST00000483030 UBE2AP49459 152 aa4.26□□□□□ -1.73
CSDE1-206ENST00000483030 FAM229BQ4G0N7 80 aa4.26□□□□□ -1.73
CSDE1-206ENST00000483030 C2orf66Q6UXQ4 117 aa4.26□□□□□ -1.73
CSDE1-206ENST00000483030 CDKN2A-AS1Q9UH64 79 aa4.26□□□□□ -1.73
CSDE1-206ENST00000483030 TRAPPC1Q9Y5R8 145 aa4.26□□□□□ -1.73
CSDE1-206ENST00000483030 IGKV2D-26A0A0A0MRZ7 120 aa4.25□□□□□ -1.73
CSDE1-206ENST00000483030 E9PLD3 99 aa4.25□□□□□ -1.73
CSDE1-206ENST00000483030 C3orf79P0CE67 100 aa4.25□□□□□ -1.73
CSDE1-206ENST00000483030 SCGB1D4Q6XE38 83 aa4.25□□□□□ -1.73
CSDE1-206ENST00000483030 KRTAP13-1Q8IUC0 172 aa4.25□□□□□ -1.73
CSDE1-206ENST00000483030 BRK1Q8WUW1 75 aa4.25□□□□□ -1.73
CSDE1-206ENST00000483030 RBM12B-AS1Q9P1G2 102 aa4.25□□□□□ -1.73
CSDE1-206ENST00000483030 SERP1Q9Y6X1 66 aa4.25□□□□□ -1.73
CSDE1-206ENST00000483030 MUC17Q685J3 4493 aa4.24□□□□□ -1.73
CSDE1-206ENST00000483030 IGIPA6NJ69 53 aa4.24□□□□□ -1.73
CSDE1-206ENST00000483030 C8orf87E5RJ46 101 aa4.24□□□□□ -1.73
CSDE1-206ENST00000483030 LINC01545Q5VT33 79 aa4.24□□□□□ -1.73
CSDE1-206ENST00000483030 FAM19A3Q7Z5A8 133 aa4.24□□□□□ -1.73
CSDE1-206ENST00000483030 TEN1Q86WV5 123 aa4.24□□□□□ -1.73
CSDE1-206ENST00000483030 Q8N8P6 123 aa4.24□□□□□ -1.73
CSDE1-206ENST00000483030 SERF1AO75920 110 aa4.23□□□□□ -1.73
CSDE1-206ENST00000483030 COX8AP10176 69 aa4.23□□□□□ -1.73
CSDE1-206ENST00000483030 CXCL5P42830 114 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms