RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 LINC01546A6NGU7 62 aa-1.13□□□□□ -2.59
KDM1A-204ENST00000481879 CCDC58Q4VC31 144 aa-1.13□□□□□ -2.59
KDM1A-204ENST00000481879 MANBALQ9NQG1 85 aa-1.13□□□□□ -2.59
KDM1A-204ENST00000481879 UBE2D4Q9Y2X8 147 aa-1.13□□□□□ -2.59
KDM1A-204ENST00000481879 C4AP0C0L4 1744 aa-1.13□□□□□ -2.59
KDM1A-204ENST00000481879 C4BP0C0L5 1744 aa-1.13□□□□□ -2.59
KDM1A-204ENST00000481879 MBD5Q9P267 1494 aa-1.13□□□□□ -2.59
KDM1A-204ENST00000481879 CLIP1P30622 1438 aa-1.14□□□□□ -2.59
KDM1A-204ENST00000481879 VCANP13611 3396 aa-1.14□□□□□ -2.59
KDM1A-204ENST00000481879 KIAA1551Q9HCM1 1747 aa-1.14□□□□□ -2.59
KDM1A-204ENST00000481879 A0A1B0GWA3 101 aa-1.14□□□□□ -2.59
KDM1A-204ENST00000481879 SNCAP37840 140 aa-1.14□□□□□ -2.59
KDM1A-204ENST00000481879 PRO3102Q9H379 93 aa-1.14□□□□□ -2.59
KDM1A-204ENST00000481879 DPH3P1Q9H4G8 78 aa-1.14□□□□□ -2.59
KDM1A-204ENST00000481879 SCN11AQ9UI33 1791 aa-1.15□□□□□ -2.59
KDM1A-204ENST00000481879 C1orf167Q5SNV9 1468 aa-1.15□□□□□ -2.59
KDM1A-204ENST00000481879 A0A1B0GU69 56 aa-1.15□□□□□ -2.59
KDM1A-204ENST00000481879 AKAIN1P0CW23 69 aa-1.15□□□□□ -2.59
KDM1A-204ENST00000481879 DEFB106AQ8N104 65 aa-1.15□□□□□ -2.59
KDM1A-204ENST00000481879 LRRC37AA6NMS7 1700 aa-1.15□□□□□ -2.59
KDM1A-204ENST00000481879 CEP152O94986 1710 aa-1.15□□□□□ -2.59
KDM1A-204ENST00000481879 TIAM2Q8IVF5 1701 aa-1.15□□□□□ -2.59
KDM1A-204ENST00000481879 PRDM15P57071 1507 aaPredicted RBP-1.15□□□□□ -2.59
KDM1A-204ENST00000481879 UNC80Q8N2C7 3258 aa-1.16□□□□□ -2.59
KDM1A-204ENST00000481879 PLEKHH2Q8IVE3 1493 aa-1.16□□□□□ -2.59
KDM1A-204ENST00000481879 NLRP1Q9C000 1473 aa-1.16□□□□□ -2.59
KDM1A-204ENST00000481879 CFAP47Q6ZTR5 3102 aa-1.16□□□□□ -2.59
KDM1A-204ENST00000481879 SPTY2D1-AS1A0A0U1RR47 76 aa-1.16□□□□□ -2.6
KDM1A-204ENST00000481879 UBE2L5PA0A1B0GUS4 154 aa-1.16□□□□□ -2.6
KDM1A-204ENST00000481879 TRAPPC2P0DI81 140 aa-1.16□□□□□ -2.6
KDM1A-204ENST00000481879 TRAPPC2BP0DI82 140 aa-1.16□□□□□ -2.6
KDM1A-204ENST00000481879 UBE2L3P68036 154 aaKnown RBP-1.16□□□□□ -2.6
KDM1A-204ENST00000481879 Q0VG73 95 aa-1.16□□□□□ -2.6
KDM1A-204ENST00000481879 NMSQ5H8A3 153 aa-1.16□□□□□ -2.6
KDM1A-204ENST00000481879 C9orf153Q5TBE3 101 aa-1.16□□□□□ -2.6
KDM1A-204ENST00000481879 KIF20BQ96Q89 1820 aa-1.17□□□□□ -2.6
KDM1A-204ENST00000481879 NUP188Q5SRE5 1749 aa-1.17□□□□□ -2.6
KDM1A-204ENST00000481879 NDUFA3O95167 84 aa-1.17□□□□□ -2.6
KDM1A-204ENST00000481879 DEFB136Q30KP8 78 aa-1.17□□□□□ -2.6
KDM1A-204ENST00000481879 EDC4Q6P2E9 1401 aaKnown RBP-1.17□□□□□ -2.6
KDM1A-204ENST00000481879 TET3O43151 1660 aa-1.17□□□□□ -2.6
KDM1A-204ENST00000481879 SPEF2Q9C093 1822 aa-1.17□□□□□ -2.6
KDM1A-204ENST00000481879 MYOM1P52179 1685 aa-1.18□□□□□ -2.6
KDM1A-204ENST00000481879 A8MTW9 85 aa-1.18□□□□□ -2.6
KDM1A-204ENST00000481879 C6orf201Q7Z4U5 140 aa-1.18□□□□□ -2.6
KDM1A-204ENST00000481879 PSENENQ9NZ42 101 aa-1.18□□□□□ -2.6
KDM1A-204ENST00000481879 RGPD3A6NKT7 1758 aaPredicted RBP-1.19□□□□□ -2.6
KDM1A-204ENST00000481879 RGPD4Q7Z3J3 1758 aa-1.19□□□□□ -2.6
KDM1A-204ENST00000481879 IGLV5-48A0A075B6I7 105 aa-1.19□□□□□ -2.6
KDM1A-204ENST00000481879 FAM24AA6NFZ4 105 aa-1.19□□□□□ -2.6
KDM1A-204ENST00000481879 F6UZH7 168 aa-1.19□□□□□ -2.6
KDM1A-204ENST00000481879 K7EP13 123 aa-1.19□□□□□ -2.6
KDM1A-204ENST00000481879 NAIPQ13075 1403 aa-1.19□□□□□ -2.6
KDM1A-204ENST00000481879 ATP7BP35670 1465 aa-1.19□□□□□ -2.6
KDM1A-204ENST00000481879 SCN7AQ01118 1682 aa-1.2□□□□□ -2.6
KDM1A-204ENST00000481879 CUX1P39880 1505 aa-1.2□□□□□ -2.6
KDM1A-204ENST00000481879 ANKRD36CQ5JPF3 1778 aa-1.2□□□□□ -2.6
KDM1A-204ENST00000481879 TRBV7-7A0A0K0K1E9 115 aa-1.2□□□□□ -2.6
KDM1A-204ENST00000481879 MT-ATP8P03928 68 aa-1.2□□□□□ -2.6
KDM1A-204ENST00000481879 COX6CP09669 75 aa-1.2□□□□□ -2.6
KDM1A-204ENST00000481879 SPART-AS1P0CW21 52 aa-1.2□□□□□ -2.6
KDM1A-204ENST00000481879 COX6B2Q6YFQ2 88 aa-1.2□□□□□ -2.6
KDM1A-204ENST00000481879 PRO1854Q9UHT4 67 aa-1.2□□□□□ -2.6
KDM1A-204ENST00000481879 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.2□□□□□ -2.6
KDM1A-204ENST00000481879 ADGRL2O95490 1459 aa-1.2□□□□□ -2.6
KDM1A-204ENST00000481879 PREX1Q8TCU6 1659 aa-1.2□□□□□ -2.6
KDM1A-204ENST00000481879 UBR3Q6ZT12 1888 aa-1.2□□□□□ -2.6
KDM1A-204ENST00000481879 MAPKBP1O60336 1514 aa-1.2□□□□□ -2.6
KDM1A-204ENST00000481879 KTN1Q86UP2 1357 aaKnown RBP-1.21□□□□□ -2.6
KDM1A-204ENST00000481879 CENPFP49454 3210 aa-1.21□□□□□ -2.6
KDM1A-204ENST00000481879 DIP2CQ9Y2E4 1556 aa-1.21□□□□□ -2.6
KDM1A-204ENST00000481879 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.21□□□□□ -2.6
KDM1A-204ENST00000481879 LCE6AA0A183 80 aa-1.21□□□□□ -2.6
KDM1A-204ENST00000481879 SNAPC5O75971 98 aa-1.21□□□□□ -2.6
KDM1A-204ENST00000481879 DEFB130BP0DP73 79 aa-1.21□□□□□ -2.6
KDM1A-204ENST00000481879 DEFB130AP0DP74 79 aa-1.21□□□□□ -2.6
KDM1A-204ENST00000481879 LINC00158P58513 81 aa-1.21□□□□□ -2.6
KDM1A-204ENST00000481879 TSC22D3Q99576 134 aa-1.21□□□□□ -2.6
KDM1A-204ENST00000481879 C12orf57Q99622 126 aa-1.21□□□□□ -2.6
KDM1A-204ENST00000481879 FAM107BQ9H098 131 aa-1.21□□□□□ -2.6
KDM1A-204ENST00000481879 RGPD8O14715 1765 aaPredicted RBP-1.21□□□□□ -2.6
KDM1A-204ENST00000481879 RGPD5Q99666 1765 aa-1.21□□□□□ -2.6
KDM1A-204ENST00000481879 PLXNC1O60486 1568 aa-1.21□□□□□ -2.6
KDM1A-204ENST00000481879 CUL7Q14999 1698 aa-1.22□□□□□ -2.6
KDM1A-204ENST00000481879 A0A0G2JND7 137 aa-1.22□□□□□ -2.6
KDM1A-204ENST00000481879 M0QZ58 72 aa-1.22□□□□□ -2.6
KDM1A-204ENST00000481879 ARMS2P0C7Q2 107 aa-1.22□□□□□ -2.6
KDM1A-204ENST00000481879 C3orf79P0CE67 100 aa-1.22□□□□□ -2.6
KDM1A-204ENST00000481879 SAA2P0DJI9 122 aaPredicted RBP-1.22□□□□□ -2.6
KDM1A-204ENST00000481879 GNGT1P63211 74 aa-1.22□□□□□ -2.6
KDM1A-204ENST00000481879 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.23□□□□□ -2.61
KDM1A-204ENST00000481879 ABCC5O15440 1437 aa-1.23□□□□□ -2.61
KDM1A-204ENST00000481879 DNAH12Q6ZR08 3092 aa-1.23□□□□□ -2.61
KDM1A-204ENST00000481879 EHBP1L1Q8N3D4 1523 aa-1.23□□□□□ -2.61
KDM1A-204ENST00000481879 IAPPP10997 89 aa-1.23□□□□□ -2.61
KDM1A-204ENST00000481879 ATP5EP56381 51 aaPredicted RBP-1.23□□□□□ -2.61
KDM1A-204ENST00000481879 HSD52Q0P140 79 aa-1.23□□□□□ -2.61
KDM1A-204ENST00000481879 DEFB107AQ8IZN7 70 aa-1.23□□□□□ -2.61
KDM1A-204ENST00000481879 SERP2Q8N6R1 65 aa-1.23□□□□□ -2.61
KDM1A-204ENST00000481879 LEAP2Q969E1 77 aa-1.23□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms