RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 APOC4P55056 127 aa8.86□□□□□ -0.99
C9orf78-205ENST00000480023 TNP2Q05952 138 aa8.86□□□□□ -0.99
C9orf78-205ENST00000480023 C15orf56Q8N910 161 aa8.86□□□□□ -0.99
C9orf78-205ENST00000480023 Q6ZRP5 223 aa8.85□□□□□ -0.99
C9orf78-205ENST00000480023 C1orf64Q8NEQ6 169 aa8.85□□□□□ -0.99
C9orf78-205ENST00000480023 PRB1P04280 392 aa8.84□□□□□ -0.99
C9orf78-205ENST00000480023 PIEZO1Q92508 2521 aa8.84□□□□□ -0.99
C9orf78-205ENST00000480023 UBR5O95071 2799 aaPredicted RBP8.83□□□□□ -1
C9orf78-205ENST00000480023 ETDCA0A1B0GVM5 59 aa8.83□□□□□ -1
C9orf78-205ENST00000480023 KRTAP1-1Q07627 177 aa8.83□□□□□ -1
C9orf78-205ENST00000480023 Q8NBF4 154 aa8.83□□□□□ -1
C9orf78-205ENST00000480023 SPRR4Q96PI1 79 aa8.83□□□□□ -1
C9orf78-205ENST00000480023 CYP4F30PQ9H0H9 118 aa8.83□□□□□ -1
C9orf78-205ENST00000480023 CCDC168Q8NDH2 2452 aa8.83□□□□□ -1
C9orf78-205ENST00000480023 HTN3P15516 51 aa8.83□□□□□ -1
C9orf78-205ENST00000480023 DHRS4-AS1Q9P1J3 65 aa8.83□□□□□ -1
C9orf78-205ENST00000480023 FLNAP21333 2647 aaKnown RBP8.82□□□□□ -1
C9orf78-205ENST00000480023 DEFB105AQ8NG35 78 aa8.82□□□□□ -1
C9orf78-205ENST00000480023 DSCR10P59022 87 aa8.81□□□□□ -1
C9orf78-205ENST00000480023 SEC61GP60059 68 aa8.81□□□□□ -1
C9orf78-205ENST00000480023 KRTAP10-3P60369 221 aa8.81□□□□□ -1
C9orf78-205ENST00000480023 ZNF462Q96JM2 2506 aa8.8□□□□□ -1
C9orf78-205ENST00000480023 C1orf137Q5JT78 98 aa8.8□□□□□ -1
C9orf78-205ENST00000480023 Q6ZRX8 168 aa8.8□□□□□ -1
C9orf78-205ENST00000480023 C7orf33Q8WU49 177 aa8.8□□□□□ -1
C9orf78-205ENST00000480023 NKAPP1Q8N9T2 125 aa8.8□□□□□ -1
C9orf78-205ENST00000480023 ANK3Q12955 4377 aaKnown RBP8.79□□□□□ -1
C9orf78-205ENST00000480023 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.79□□□□□ -1
C9orf78-205ENST00000480023 KRTAP4-16G5E9R7 235 aaPredicted RBP8.79□□□□□ -1
C9orf78-205ENST00000480023 WFDC10BQ8IUB3 73 aa8.79□□□□□ -1
C9orf78-205ENST00000480023 K7EQZ3 153 aa8.77□□□□□ -1.01
C9orf78-205ENST00000480023 SERTAD4-AS1Q5TG53 156 aa8.77□□□□□ -1.01
C9orf78-205ENST00000480023 Q9BRP9 147 aa8.77□□□□□ -1.01
C9orf78-205ENST00000480023 PLA2G2DQ9UNK4 145 aa8.77□□□□□ -1.01
C9orf78-205ENST00000480023 HIVEP2P31629 2446 aa8.77□□□□□ -1.01
C9orf78-205ENST00000480023 H3BNG1 76 aa8.77□□□□□ -1.01
C9orf78-205ENST00000480023 SPRR1AP35321 89 aa8.77□□□□□ -1.01
C9orf78-205ENST00000480023 SYCNQ0VAF6 134 aa8.76□□□□□ -1.01
C9orf78-205ENST00000480023 MTORP42345 2549 aa8.76□□□□□ -1.01
C9orf78-205ENST00000480023 TRAV22A0A0B4J277 110 aa8.75□□□□□ -1.01
C9orf78-205ENST00000480023 LRCOL1A6NCL2 159 aa8.75□□□□□ -1.01
C9orf78-205ENST00000480023 NDUFB1O75438 58 aa8.75□□□□□ -1.01
C9orf78-205ENST00000480023 HCG22E2RYF7 251 aa8.75□□□□□ -1.01
C9orf78-205ENST00000480023 PMAIP1Q13794 54 aa8.74□□□□□ -1.01
C9orf78-205ENST00000480023 IGLV5-37A0A075B6J1 123 aa8.74□□□□□ -1.01
C9orf78-205ENST00000480023 TLX1NBP0CAT3 122 aa8.74□□□□□ -1.01
C9orf78-205ENST00000480023 PSCAO43653 123 aa8.73□□□□□ -1.01
C9orf78-205ENST00000480023 ST20-AS1Q8NBB2 130 aa8.73□□□□□ -1.01
C9orf78-205ENST00000480023 IGLV1-50A0A075B6I6 118 aa8.72□□□□□ -1.01
C9orf78-205ENST00000480023 PSPHP1O15172 72 aa8.71□□□□□ -1.02
C9orf78-205ENST00000480023 ACANP16112 2415 aa8.69□□□□□ -1.02
C9orf78-205ENST00000480023 VWFP04275 2813 aa8.69□□□□□ -1.02
C9orf78-205ENST00000480023 LINC01556Q5JQF7 62 aa8.68□□□□□ -1.02
C9orf78-205ENST00000480023 RPL37AP8A6NKH3 93 aa8.68□□□□□ -1.02
C9orf78-205ENST00000480023 IGKV2D-24A0A075B6R9 120 aa8.67□□□□□ -1.02
C9orf78-205ENST00000480023 MP68P56378 58 aa8.66□□□□□ -1.02
C9orf78-205ENST00000480023 SPANXA2-OT1Q8N9U9 137 aa8.66□□□□□ -1.02
C9orf78-205ENST00000480023 PRR4Q16378 134 aa8.65□□□□□ -1.02
C9orf78-205ENST00000480023 HIVEP1P15822 2718 aa8.65□□□□□ -1.02
C9orf78-205ENST00000480023 A8MUN3 132 aa8.65□□□□□ -1.03
C9orf78-205ENST00000480023 KRTAP7-1Q8IUC3 87 aa8.65□□□□□ -1.03
C9orf78-205ENST00000480023 LINC00476Q8WZB0 136 aa8.65□□□□□ -1.03
C9orf78-205ENST00000480023 B9D2Q9BPU9 175 aa8.65□□□□□ -1.03
C9orf78-205ENST00000480023 Q5VV11 94 aa8.64□□□□□ -1.03
C9orf78-205ENST00000480023 FAM168BA1KXE4 195 aa8.63□□□□□ -1.03
C9orf78-205ENST00000480023 H3BPC8 53 aa8.63□□□□□ -1.03
C9orf78-205ENST00000480023 KRTAP29-1A8MX34 341 aaPredicted RBP8.62□□□□□ -1.03
C9orf78-205ENST00000480023 USP24Q9UPU5 2620 aa8.62□□□□□ -1.03
C9orf78-205ENST00000480023 UNC79Q9P2D8 2635 aa8.61□□□□□ -1.03
C9orf78-205ENST00000480023 IGLV8-61A0A075B6I0 122 aa8.61□□□□□ -1.03
C9orf78-205ENST00000480023 IGFL1Q6UW32 110 aa8.61□□□□□ -1.03
C9orf78-205ENST00000480023 MRPL55Q7Z7F7 128 aaKnown RBP8.61□□□□□ -1.03
C9orf78-205ENST00000480023 PDZD2O15018 2839 aa8.61□□□□□ -1.03
C9orf78-205ENST00000480023 UBE2BP63146 152 aa8.6□□□□□ -1.03
C9orf78-205ENST00000480023 WFDC13Q8IUB5 93 aa8.6□□□□□ -1.03
C9orf78-205ENST00000480023 LIMD2Q9BT23 127 aa8.6□□□□□ -1.03
C9orf78-205ENST00000480023 Q8N9P0 234 aaPredicted RBP8.59□□□□□ -1.03
C9orf78-205ENST00000480023 LINC00208Q96KT6 92 aa8.59□□□□□ -1.03
C9orf78-205ENST00000480023 DNAH10OSP0CZ25 163 aa8.59□□□□□ -1.03
C9orf78-205ENST00000480023 LINC00588Q9Y4M8 146 aa8.59□□□□□ -1.03
C9orf78-205ENST00000480023 REG3GQ6UW15 175 aa8.57□□□□□ -1.04
C9orf78-205ENST00000480023 UBE2AP49459 152 aa8.57□□□□□ -1.04
C9orf78-205ENST00000480023 H0Y9P7 68 aa8.56□□□□□ -1.04
C9orf78-205ENST00000480023 A0A087WSZ3 146 aa8.55□□□□□ -1.04
C9orf78-205ENST00000480023 CD164Q04900 197 aa8.55□□□□□ -1.04
C9orf78-205ENST00000480023 DEFB116Q30KQ4 102 aa8.55□□□□□ -1.04
C9orf78-205ENST00000480023 A0A0G2JQZ4 141 aa8.54□□□□□ -1.04
C9orf78-205ENST00000480023 A0A1W2PNN7 141 aa8.54□□□□□ -1.04
C9orf78-205ENST00000480023 A8MU10 97 aa8.54□□□□□ -1.04
C9orf78-205ENST00000480023 C9orf163Q8N9P6 203 aa8.54□□□□□ -1.04
C9orf78-205ENST00000480023 PRB2P02812 416 aaPredicted RBP8.53□□□□□ -1.04
C9orf78-205ENST00000480023 CASC2Q6XLA1 102 aa8.53□□□□□ -1.04
C9orf78-205ENST00000480023 RETNQ9HD89 108 aa8.53□□□□□ -1.04
C9orf78-205ENST00000480023 CHKB-CPT1BH3BT56 60 aa8.52□□□□□ -1.05
C9orf78-205ENST00000480023 C16orf90A8MZG2 172 aa8.51□□□□□ -1.05
C9orf78-205ENST00000480023 NOTCH2Q04721 2471 aa8.51□□□□□ -1.05
C9orf78-205ENST00000480023 LOC101927531A0A1B0GV80 90 aa8.51□□□□□ -1.05
C9orf78-205ENST00000480023 RPL37AP61513 92 aaKnown RBP8.51□□□□□ -1.05
C9orf78-205ENST00000480023 CNBPP62633 177 aaKnown RBP8.51□□□□□ -1.05
C9orf78-205ENST00000480023 Q75L30 129 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms