RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 RPL37AP61513 92 aaKnown RBP7.73□□□□□ -1.17
TRAPPC12-218ENST00000479897 Q8N1X5 172 aa7.73□□□□□ -1.17
TRAPPC12-218ENST00000479897 ZNF73O43830 326 aaPredicted RBP7.72□□□□□ -1.17
TRAPPC12-218ENST00000479897 BCE1O60756 84 aa7.72□□□□□ -1.17
TRAPPC12-218ENST00000479897 PRO1854Q9UHT4 67 aa7.72□□□□□ -1.17
TRAPPC12-218ENST00000479897 FAM229AH3BQW9 127 aa7.71□□□□□ -1.18
TRAPPC12-218ENST00000479897 C1orf137Q5JT78 98 aa7.71□□□□□ -1.18
TRAPPC12-218ENST00000479897 DIRC1Q969H9 104 aa7.71□□□□□ -1.18
TRAPPC12-218ENST00000479897 TRBV7-6A0A0J9YX20 115 aa7.7□□□□□ -1.18
TRAPPC12-218ENST00000479897 H0Y9J4 135 aa7.7□□□□□ -1.18
TRAPPC12-218ENST00000479897 K7ERJ3 54 aa7.7□□□□□ -1.18
TRAPPC12-218ENST00000479897 PLA2G1BP04054 148 aaKnown RBP7.7□□□□□ -1.18
TRAPPC12-218ENST00000479897 RPL28P46779 137 aaKnown RBP7.7□□□□□ -1.18
TRAPPC12-218ENST00000479897 Q5VSD8 79 aa7.7□□□□□ -1.18
TRAPPC12-218ENST00000479897 KRTAP13-1Q8IUC0 172 aa7.7□□□□□ -1.18
TRAPPC12-218ENST00000479897 SMIM11BQ8TCY0 68 aa7.7□□□□□ -1.18
TRAPPC12-218ENST00000479897 FAT1Q14517 4588 aa7.69□□□□□ -1.18
TRAPPC12-218ENST00000479897 IGLV7-43P04211 117 aa7.69□□□□□ -1.18
TRAPPC12-218ENST00000479897 ETDCA0A1B0GVM5 59 aa7.68□□□□□ -1.18
TRAPPC12-218ENST00000479897 ELOF1P60002 83 aaKnown RBP7.68□□□□□ -1.18
TRAPPC12-218ENST00000479897 C6orf99Q4VX62 202 aa7.68□□□□□ -1.18
TRAPPC12-218ENST00000479897 Q6ZRX8 168 aa7.68□□□□□ -1.18
TRAPPC12-218ENST00000479897 KRTAP17-1Q9BYP8 105 aa7.68□□□□□ -1.18
TRAPPC12-218ENST00000479897 B5MCH6 92 aa7.67□□□□□ -1.18
TRAPPC12-218ENST00000479897 FAM19A1Q7Z5A9 133 aa7.67□□□□□ -1.18
TRAPPC12-218ENST00000479897 HERC2O95714 4834 aa7.67□□□□□ -1.18
TRAPPC12-218ENST00000479897 PCP4L1A6NKN8 68 aa7.66□□□□□ -1.18
TRAPPC12-218ENST00000479897 ZNF861PO60384 105 aa7.66□□□□□ -1.18
TRAPPC12-218ENST00000479897 TSPAN13O95857 204 aa7.66□□□□□ -1.18
TRAPPC12-218ENST00000479897 UBE2AP49459 152 aa7.66□□□□□ -1.18
TRAPPC12-218ENST00000479897 SNHG12Q9BXW3 62 aa7.66□□□□□ -1.18
TRAPPC12-218ENST00000479897 H7C2G1 150 aa7.65□□□□□ -1.18
TRAPPC12-218ENST00000479897 COX7BP24311 80 aa7.65□□□□□ -1.18
TRAPPC12-218ENST00000479897 PRLHP81277 87 aa7.65□□□□□ -1.18
TRAPPC12-218ENST00000479897 BATFQ16520 125 aa7.65□□□□□ -1.18
TRAPPC12-218ENST00000479897 Q1RN00 199 aa7.65□□□□□ -1.18
TRAPPC12-218ENST00000479897 PKHD1L1Q86WI1 4243 aa7.64□□□□□ -1.19
TRAPPC12-218ENST00000479897 VAMP3Q15836 100 aa7.63□□□□□ -1.19
TRAPPC12-218ENST00000479897 SPINK6Q6UWN8 80 aa7.63□□□□□ -1.19
TRAPPC12-218ENST00000479897 TRIAP1O43715 76 aa7.62□□□□□ -1.19
TRAPPC12-218ENST00000479897 INAFM2P0DMQ5 153 aa7.62□□□□□ -1.19
TRAPPC12-218ENST00000479897 SMCR5Q8TEV8 140 aa7.62□□□□□ -1.19
TRAPPC12-218ENST00000479897 Q9BRP9 147 aa7.62□□□□□ -1.19
TRAPPC12-218ENST00000479897 DHRS4-AS1Q9P1J3 65 aa7.62□□□□□ -1.19
TRAPPC12-218ENST00000479897 H0YGX0 51 aa7.61□□□□□ -1.19
TRAPPC12-218ENST00000479897 SRRM2Q9UQ35 2752 aaKnown RBP7.6□□□□□ -1.19
TRAPPC12-218ENST00000479897 TAX1BP3O14907 124 aa7.59□□□□□ -1.19
TRAPPC12-218ENST00000479897 COX6CP09669 75 aa7.59□□□□□ -1.19
TRAPPC12-218ENST00000479897 COL5A1-AS1Q5SY13 56 aa7.59□□□□□ -1.19
TRAPPC12-218ENST00000479897 LINC00575Q6W349 94 aa7.59□□□□□ -1.19
TRAPPC12-218ENST00000479897 HIGD2AQ9BW72 106 aa7.59□□□□□ -1.19
TRAPPC12-218ENST00000479897 A0A1B0GX51 115 aa7.58□□□□□ -1.2
TRAPPC12-218ENST00000479897 PSMB2P49721 201 aa7.58□□□□□ -1.2
TRAPPC12-218ENST00000479897 C9orf118A6NHY6 69 aa7.56□□□□□ -1.2
TRAPPC12-218ENST00000479897 SLC25A20O43772 301 aa7.56□□□□□ -1.2
TRAPPC12-218ENST00000479897 ERC2-IT1O76042 136 aa7.56□□□□□ -1.2
TRAPPC12-218ENST00000479897 LYRM7Q5U5X0 104 aa7.56□□□□□ -1.2
TRAPPC12-218ENST00000479897 KRTAP4-5Q9BYR2 181 aa7.56□□□□□ -1.2
TRAPPC12-218ENST00000479897 ZNF706Q9Y5V0 76 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC12-218ENST00000479897 hADV29S1A0JD25 119 aa7.55□□□□□ -1.2
TRAPPC12-218ENST00000479897 FAM218AQ96MZ4 157 aa7.55□□□□□ -1.2
TRAPPC12-218ENST00000479897 H3BUT2 72 aa7.54□□□□□ -1.2
TRAPPC12-218ENST00000479897 SPRR4Q96PI1 79 aa7.54□□□□□ -1.2
TRAPPC12-218ENST00000479897 LST1O00453 97 aa7.53□□□□□ -1.2
TRAPPC12-218ENST00000479897 SNCGO76070 127 aa7.53□□□□□ -1.2
TRAPPC12-218ENST00000479897 KRTAP1-4P0C5Y4 121 aa7.53□□□□□ -1.2
TRAPPC12-218ENST00000479897 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.53□□□□□ -1.2
TRAPPC12-218ENST00000479897 CLEC2BQ92478 149 aa7.53□□□□□ -1.2
TRAPPC12-218ENST00000479897 NAA38Q9BRA0 125 aaKnown RBP7.53□□□□□ -1.2
TRAPPC12-218ENST00000479897 IGLV5-48A0A075B6I7 105 aa7.52□□□□□ -1.21
TRAPPC12-218ENST00000479897 A0A1W2PPM0 123 aa7.52□□□□□ -1.21
TRAPPC12-218ENST00000479897 SCGB1C2P0DMR2 95 aa7.52□□□□□ -1.21
TRAPPC12-218ENST00000479897 SPRR1BP22528 89 aa7.52□□□□□ -1.21
TRAPPC12-218ENST00000479897 LINC00483Q53H64 154 aa7.52□□□□□ -1.21
TRAPPC12-218ENST00000479897 TRACP01848 142 aa7.51□□□□□ -1.21
TRAPPC12-218ENST00000479897 Q6ZQY7 126 aa7.51□□□□□ -1.21
TRAPPC12-218ENST00000479897 TRBV20-1A0A075B6N2 111 aa7.5□□□□□ -1.21
TRAPPC12-218ENST00000479897 LINC01547P58512 204 aaPredicted RBP7.5□□□□□ -1.21
TRAPPC12-218ENST00000479897 FAM229BQ4G0N7 80 aa7.5□□□□□ -1.21
TRAPPC12-218ENST00000479897 OCIAD2Q56VL3 154 aa7.5□□□□□ -1.21
TRAPPC12-218ENST00000479897 ST20-AS1Q8NBB2 130 aa7.5□□□□□ -1.21
TRAPPC12-218ENST00000479897 ABCA13Q86UQ4 5058 aa7.5□□□□□ -1.21
TRAPPC12-218ENST00000479897 TCL1BO95988 128 aa7.49□□□□□ -1.21
TRAPPC12-218ENST00000479897 FABP2P12104 132 aa7.49□□□□□ -1.21
TRAPPC12-218ENST00000479897 PPDPFLQ8WWR9 84 aa7.49□□□□□ -1.21
TRAPPC12-218ENST00000479897 FLG2Q5D862 2391 aaPredicted RBP7.49□□□□□ -1.21
TRAPPC12-218ENST00000479897 DNAL4O96015 105 aa7.48□□□□□ -1.21
TRAPPC12-218ENST00000479897 ATXN8Q156A1 80 aa7.48□□□□□ -1.21
TRAPPC12-218ENST00000479897 TEX49A0A1B0GTD5 131 aa7.47□□□□□ -1.21
TRAPPC12-218ENST00000479897 GHRHP01286 108 aa7.47□□□□□ -1.21
TRAPPC12-218ENST00000479897 GAGE2AQ6NT46 116 aa7.47□□□□□ -1.21
TRAPPC12-218ENST00000479897 H3BQ85 93 aa7.46□□□□□ -1.22
TRAPPC12-218ENST00000479897 LINC01600Q96MT4 127 aa7.46□□□□□ -1.22
TRAPPC12-218ENST00000479897 OXTP01178 125 aa7.45□□□□□ -1.22
TRAPPC12-218ENST00000479897 Q8N377 158 aa7.45□□□□□ -1.22
TRAPPC12-218ENST00000479897 ORMDL1Q9P0S3 153 aa7.45□□□□□ -1.22
TRAPPC12-218ENST00000479897 MYCBP2O75592 4640 aa7.44□□□□□ -1.22
TRAPPC12-218ENST00000479897 CRYGAP11844 174 aa7.44□□□□□ -1.22
TRAPPC12-218ENST00000479897 FAT3Q8TDW7 4589 aa7.44□□□□□ -1.22
TRAPPC12-218ENST00000479897 A0A087X002 238 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms