RNA–Protein interactions for RNA: ENST00000479008.1

SMARCAL1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 633 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-211ENST00000479008 A0A1B0GWB2 263 aa8.42□□□□□ -1.06
SMARCAL1-211ENST00000479008 H7C2G1 150 aa8.42□□□□□ -1.06
SMARCAL1-211ENST00000479008 RPL37AP61513 92 aaKnown RBP8.42□□□□□ -1.06
SMARCAL1-211ENST00000479008 SMIM11BQ8TCY0 68 aa8.41□□□□□ -1.06
SMARCAL1-211ENST00000479008 FAM229AH3BQW9 127 aa8.4□□□□□ -1.06
SMARCAL1-211ENST00000479008 ZNF73O43830 326 aaPredicted RBP8.4□□□□□ -1.06
SMARCAL1-211ENST00000479008 BCE1O60756 84 aa8.4□□□□□ -1.06
SMARCAL1-211ENST00000479008 SPRR1AP35321 89 aa8.4□□□□□ -1.06
SMARCAL1-211ENST00000479008 Q1RN00 199 aa8.4□□□□□ -1.06
SMARCAL1-211ENST00000479008 DIRC1Q969H9 104 aa8.4□□□□□ -1.06
SMARCAL1-211ENST00000479008 FAT1Q14517 4588 aa8.39□□□□□ -1.07
SMARCAL1-211ENST00000479008 ETDCA0A1B0GVM5 59 aa8.39□□□□□ -1.07
SMARCAL1-211ENST00000479008 C6orf99Q4VX62 202 aa8.39□□□□□ -1.07
SMARCAL1-211ENST00000479008 FAM19A1Q7Z5A9 133 aa8.39□□□□□ -1.07
SMARCAL1-211ENST00000479008 Q5VSD8 79 aa8.38□□□□□ -1.07
SMARCAL1-211ENST00000479008 SNHG12Q9BXW3 62 aa8.38□□□□□ -1.07
SMARCAL1-211ENST00000479008 KRTAP4-16G5E9R7 235 aaPredicted RBP8.37□□□□□ -1.07
SMARCAL1-211ENST00000479008 PLA2G1BP04054 148 aaKnown RBP8.37□□□□□ -1.07
SMARCAL1-211ENST00000479008 UBE2AP49459 152 aa8.37□□□□□ -1.07
SMARCAL1-211ENST00000479008 PRLHP81277 87 aa8.37□□□□□ -1.07
SMARCAL1-211ENST00000479008 Q8N1X5 172 aa8.37□□□□□ -1.07
SMARCAL1-211ENST00000479008 KRTAP17-1Q9BYP8 105 aa8.37□□□□□ -1.07
SMARCAL1-211ENST00000479008 TSPAN13O95857 204 aa8.36□□□□□ -1.07
SMARCAL1-211ENST00000479008 IGLV7-43P04211 117 aa8.36□□□□□ -1.07
SMARCAL1-211ENST00000479008 RPL28P46779 137 aaKnown RBP8.36□□□□□ -1.07
SMARCAL1-211ENST00000479008 VPS13BQ7Z7G8 4022 aa8.36□□□□□ -1.07
SMARCAL1-211ENST00000479008 B5MCH6 92 aa8.35□□□□□ -1.07
SMARCAL1-211ENST00000479008 KRTAP10-4P60372 401 aaPredicted RBP8.35□□□□□ -1.07
SMARCAL1-211ENST00000479008 COX7BP24311 80 aa8.34□□□□□ -1.07
SMARCAL1-211ENST00000479008 TRBV7-6A0A0J9YX20 115 aa8.33□□□□□ -1.08
SMARCAL1-211ENST00000479008 PSMB2P49721 201 aa8.33□□□□□ -1.08
SMARCAL1-211ENST00000479008 ELOF1P60002 83 aaKnown RBP8.33□□□□□ -1.08
SMARCAL1-211ENST00000479008 VAMP3Q15836 100 aa8.33□□□□□ -1.08
SMARCAL1-211ENST00000479008 Q6ZRX8 168 aa8.33□□□□□ -1.08
SMARCAL1-211ENST00000479008 KRTAP13-1Q8IUC0 172 aa8.33□□□□□ -1.08
SMARCAL1-211ENST00000479008 TRIAP1O43715 76 aa8.32□□□□□ -1.08
SMARCAL1-211ENST00000479008 ZNF861PO60384 105 aa8.32□□□□□ -1.08
SMARCAL1-211ENST00000479008 HIGD2AQ9BW72 106 aa8.32□□□□□ -1.08
SMARCAL1-211ENST00000479008 H0Y9J4 135 aa8.31□□□□□ -1.08
SMARCAL1-211ENST00000479008 NAA38Q9BRA0 125 aaKnown RBP8.31□□□□□ -1.08
SMARCAL1-211ENST00000479008 Q9BRP9 147 aa8.3□□□□□ -1.08
SMARCAL1-211ENST00000479008 PKHD1L1Q86WI1 4243 aa8.3□□□□□ -1.08
SMARCAL1-211ENST00000479008 TAX1BP3O14907 124 aa8.29□□□□□ -1.08
SMARCAL1-211ENST00000479008 COL5A1-AS1Q5SY13 56 aa8.29□□□□□ -1.08
SMARCAL1-211ENST00000479008 SMCR5Q8TEV8 140 aa8.29□□□□□ -1.08
SMARCAL1-211ENST00000479008 H0YGX0 51 aa8.28□□□□□ -1.08
SMARCAL1-211ENST00000479008 COX6CP09669 75 aa8.28□□□□□ -1.08
SMARCAL1-211ENST00000479008 SPINK6Q6UWN8 80 aa8.27□□□□□ -1.09
SMARCAL1-211ENST00000479008 DHRS4-AS1Q9P1J3 65 aa8.27□□□□□ -1.09
SMARCAL1-211ENST00000479008 HERC2O95714 4834 aa8.26□□□□□ -1.09
SMARCAL1-211ENST00000479008 C9orf118A6NHY6 69 aa8.26□□□□□ -1.09
SMARCAL1-211ENST00000479008 H3BUT2 72 aa8.26□□□□□ -1.09
SMARCAL1-211ENST00000479008 ERC2-IT1O76042 136 aa8.26□□□□□ -1.09
SMARCAL1-211ENST00000479008 INAFM2P0DMQ5 153 aa8.26□□□□□ -1.09
SMARCAL1-211ENST00000479008 SCGB1C2P0DMR2 95 aa8.26□□□□□ -1.09
SMARCAL1-211ENST00000479008 LINC00575Q6W349 94 aa8.26□□□□□ -1.09
SMARCAL1-211ENST00000479008 SLC25A20O43772 301 aa8.25□□□□□ -1.09
SMARCAL1-211ENST00000479008 CLEC2BQ92478 149 aa8.25□□□□□ -1.09
SMARCAL1-211ENST00000479008 FAM218AQ96MZ4 157 aa8.25□□□□□ -1.09
SMARCAL1-211ENST00000479008 SRRM2Q9UQ35 2752 aaKnown RBP8.24□□□□□ -1.09
SMARCAL1-211ENST00000479008 KRTAP4-5Q9BYR2 181 aa8.24□□□□□ -1.09
SMARCAL1-211ENST00000479008 hADV29S1A0JD25 119 aa8.23□□□□□ -1.09
SMARCAL1-211ENST00000479008 ST20-AS1Q8NBB2 130 aa8.22□□□□□ -1.09
SMARCAL1-211ENST00000479008 LYRM7Q5U5X0 104 aa8.21□□□□□ -1.1
SMARCAL1-211ENST00000479008 A0A1W2PPM0 123 aa8.2□□□□□ -1.1
SMARCAL1-211ENST00000479008 SNCGO76070 127 aa8.2□□□□□ -1.1
SMARCAL1-211ENST00000479008 SPRR4Q96PI1 79 aa8.2□□□□□ -1.1
SMARCAL1-211ENST00000479008 ZNF706Q9Y5V0 76 aaPredicted RBP8.2□□□□□ -1.1
SMARCAL1-211ENST00000479008 A0A1B0GX51 115 aa8.19□□□□□ -1.1
SMARCAL1-211ENST00000479008 Q6ZQY7 126 aa8.19□□□□□ -1.1
SMARCAL1-211ENST00000479008 LST1O00453 97 aa8.18□□□□□ -1.1
SMARCAL1-211ENST00000479008 TCL1BO95988 128 aa8.18□□□□□ -1.1
SMARCAL1-211ENST00000479008 FABP2P12104 132 aa8.18□□□□□ -1.1
SMARCAL1-211ENST00000479008 GAGE2AQ6NT46 116 aa8.18□□□□□ -1.1
SMARCAL1-211ENST00000479008 DEFB105AQ8NG35 78 aa8.18□□□□□ -1.1
SMARCAL1-211ENST00000479008 DNAL4O96015 105 aa8.17□□□□□ -1.1
SMARCAL1-211ENST00000479008 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.17□□□□□ -1.1
SMARCAL1-211ENST00000479008 TRACP01848 142 aa8.16□□□□□ -1.1
SMARCAL1-211ENST00000479008 KRTAP1-4P0C5Y4 121 aa8.16□□□□□ -1.1
SMARCAL1-211ENST00000479008 ATXN8Q156A1 80 aa8.16□□□□□ -1.1
SMARCAL1-211ENST00000479008 ANAPC11Q9NYG5 84 aa8.16□□□□□ -1.1
SMARCAL1-211ENST00000479008 LINC01547P58512 204 aaPredicted RBP8.15□□□□□ -1.1
SMARCAL1-211ENST00000479008 IGLV5-48A0A075B6I7 105 aa8.14□□□□□ -1.11
SMARCAL1-211ENST00000479008 TRBV20-1A0A075B6N2 111 aa8.14□□□□□ -1.11
SMARCAL1-211ENST00000479008 LINC00483Q53H64 154 aa8.14□□□□□ -1.11
SMARCAL1-211ENST00000479008 SPCS1Q9Y6A9 102 aa8.14□□□□□ -1.11
SMARCAL1-211ENST00000479008 TEX49A0A1B0GTD5 131 aa8.13□□□□□ -1.11
SMARCAL1-211ENST00000479008 SPRR1BP22528 89 aa8.13□□□□□ -1.11
SMARCAL1-211ENST00000479008 Q8N377 158 aa8.13□□□□□ -1.11
SMARCAL1-211ENST00000479008 OCIAD2Q56VL3 154 aa8.12□□□□□ -1.11
SMARCAL1-211ENST00000479008 ORMDL1Q9P0S3 153 aa8.12□□□□□ -1.11
SMARCAL1-211ENST00000479008 FAM229BQ4G0N7 80 aa8.11□□□□□ -1.11
SMARCAL1-211ENST00000479008 FLG2Q5D862 2391 aaPredicted RBP8.11□□□□□ -1.11
SMARCAL1-211ENST00000479008 A0A087X002 238 aa8.1□□□□□ -1.11
SMARCAL1-211ENST00000479008 FAT3Q8TDW7 4589 aa8.09□□□□□ -1.11
SMARCAL1-211ENST00000479008 K7EP34 96 aa8.09□□□□□ -1.11
SMARCAL1-211ENST00000479008 GHRHP01286 108 aa8.09□□□□□ -1.11
SMARCAL1-211ENST00000479008 CRYGAP11844 174 aa8.09□□□□□ -1.11
SMARCAL1-211ENST00000479008 C3orf22Q8N5N4 141 aa8.09□□□□□ -1.11
SMARCAL1-211ENST00000479008 PRR26Q8N8Z3 221 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 211.4 ms