RNA–Protein interactions for RNA: ENST00000479004.1

TRIM8-203, Transcript of tripartite motif containing 8, humanhuman

TSL 2

Gene TRIM8, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-203ENST00000479004 IGKV2-28A0A075B6P5 120 aa12.16□□□□□ -0.46
TRIM8-203ENST00000479004 IGKV2D-28P01615 120 aa12.16□□□□□ -0.46
TRIM8-203ENST00000479004 RPL28P46779 137 aaKnown RBP12.15□□□□□ -0.46
TRIM8-203ENST00000479004 LINC00518Q8N0U6 118 aa12.15□□□□□ -0.46
TRIM8-203ENST00000479004 HIST1H4GQ99525 98 aa12.14□□□□□ -0.47
TRIM8-203ENST00000479004 S100A7L2Q5SY68 101 aa12.13□□□□□ -0.47
TRIM8-203ENST00000479004 TRBV10-3A0A0K0K1G6 114 aa12.12□□□□□ -0.47
TRIM8-203ENST00000479004 DDTP30046 118 aa12.12□□□□□ -0.47
TRIM8-203ENST00000479004 C2orf91Q6ZV80 131 aa12.12□□□□□ -0.47
TRIM8-203ENST00000479004 UQCR10Q9UDW1 63 aa12.12□□□□□ -0.47
TRIM8-203ENST00000479004 PRYO14603 147 aa12.1□□□□□ -0.47
TRIM8-203ENST00000479004 IGLV6-57P01721 117 aa12.1□□□□□ -0.47
TRIM8-203ENST00000479004 KCNQ1DNQ9H478 68 aa12.1□□□□□ -0.47
TRIM8-203ENST00000479004 CBY1Q9Y3M2 126 aa12.1□□□□□ -0.47
TRIM8-203ENST00000479004 KRTAP13-1Q8IUC0 172 aa12.09□□□□□ -0.47
TRIM8-203ENST00000479004 TMEM126AQ9H061 195 aa12.09□□□□□ -0.47
TRIM8-203ENST00000479004 TAL2Q16559 108 aa12.08□□□□□ -0.48
TRIM8-203ENST00000479004 OR13C6PQ8NH95 151 aa12.08□□□□□ -0.48
TRIM8-203ENST00000479004 A0A087X002 238 aa12.07□□□□□ -0.48
TRIM8-203ENST00000479004 A4D1N5 150 aa12.06□□□□□ -0.48
TRIM8-203ENST00000479004 UBE2AP49459 152 aa12.06□□□□□ -0.48
TRIM8-203ENST00000479004 LINC00337Q8N6G1 96 aa12.05□□□□□ -0.48
TRIM8-203ENST00000479004 TRAV23DV6A0A075B6W5 121 aa12.04□□□□□ -0.48
TRIM8-203ENST00000479004 TRAV13-2A0A0B4J235 113 aa12.04□□□□□ -0.48
TRIM8-203ENST00000479004 SPRR1AP35321 89 aa12.04□□□□□ -0.48
TRIM8-203ENST00000479004 CRYGAP11844 174 aa12.03□□□□□ -0.48
TRIM8-203ENST00000479004 FAM19A1Q7Z5A9 133 aa12.03□□□□□ -0.48
TRIM8-203ENST00000479004 C12orf57Q99622 126 aa12.03□□□□□ -0.48
TRIM8-203ENST00000479004 PRO1933Q9H354 126 aa12.03□□□□□ -0.48
TRIM8-203ENST00000479004 A6NDN8 102 aa12.02□□□□□ -0.49
TRIM8-203ENST00000479004 CEND1Q8N111 149 aa12.02□□□□□ -0.49
TRIM8-203ENST00000479004 ETDCA0A1B0GVM5 59 aa12.01□□□□□ -0.49
TRIM8-203ENST00000479004 HSD52Q0P140 79 aa12.01□□□□□ -0.49
TRIM8-203ENST00000479004 TYMSOSQ8TAI1 123 aa12.01□□□□□ -0.49
TRIM8-203ENST00000479004 ANAPC11Q9NYG5 84 aa12.01□□□□□ -0.49
TRIM8-203ENST00000479004 ZNF73O43830 326 aaPredicted RBP11.99□□□□□ -0.49
TRIM8-203ENST00000479004 PRR4Q16378 134 aa11.99□□□□□ -0.49
TRIM8-203ENST00000479004 TMEM238LA0A1B0GVL6 79 aa11.98□□□□□ -0.49
TRIM8-203ENST00000479004 A6NJY4 79 aa11.98□□□□□ -0.49
TRIM8-203ENST00000479004 KRTAP4-16G5E9R7 235 aaPredicted RBP11.98□□□□□ -0.49
TRIM8-203ENST00000479004 TSPAN13O95857 204 aa11.98□□□□□ -0.49
TRIM8-203ENST00000479004 PRLHP81277 87 aa11.98□□□□□ -0.49
TRIM8-203ENST00000479004 HINT1P49773 126 aaPredicted RBP11.97□□□□□ -0.49
TRIM8-203ENST00000479004 FAM229BQ4G0N7 80 aa11.97□□□□□ -0.49
TRIM8-203ENST00000479004 KRTAP13-2Q52LG2 175 aa11.97□□□□□ -0.49
TRIM8-203ENST00000479004 TSTD3H0UI37 97 aa11.96□□□□□ -0.49
TRIM8-203ENST00000479004 B5MCH6 92 aa11.95□□□□□ -0.5
TRIM8-203ENST00000479004 CFC1BP0CG36 223 aa11.94□□□□□ -0.5
TRIM8-203ENST00000479004 CFC1P0CG37 223 aa11.94□□□□□ -0.5
TRIM8-203ENST00000479004 RAB37Q96AX2 223 aa11.94□□□□□ -0.5
TRIM8-203ENST00000479004 A0A0B4J2C4 111 aa11.93□□□□□ -0.5
TRIM8-203ENST00000479004 FXYD2P54710 66 aa11.93□□□□□ -0.5
TRIM8-203ENST00000479004 C6orf99Q4VX62 202 aa11.92□□□□□ -0.5
TRIM8-203ENST00000479004 Q6ZRX8 168 aa11.92□□□□□ -0.5
TRIM8-203ENST00000479004 SMIM11BQ8TCY0 68 aa11.91□□□□□ -0.5
TRIM8-203ENST00000479004 HIGD2AQ9BW72 106 aa11.91□□□□□ -0.5
TRIM8-203ENST00000479004 TRBV7-6A0A0J9YX20 115 aa11.9□□□□□ -0.5
TRIM8-203ENST00000479004 COX7BP24311 80 aa11.88□□□□□ -0.51
TRIM8-203ENST00000479004 MUC2Q02817 5179 aa11.87□□□□□ -0.51
TRIM8-203ENST00000479004 CTAG1AP78358 180 aa11.87□□□□□ -0.51
TRIM8-203ENST00000479004 LINC00304Q8N9R0 145 aa11.87□□□□□ -0.51
TRIM8-203ENST00000479004 SMCR5Q8TEV8 140 aa11.87□□□□□ -0.51
TRIM8-203ENST00000479004 PRO1854Q9UHT4 67 aa11.87□□□□□ -0.51
TRIM8-203ENST00000479004 A0A1B0GWB2 263 aa11.86□□□□□ -0.51
TRIM8-203ENST00000479004 ELOF1P60002 83 aaKnown RBP11.86□□□□□ -0.51
TRIM8-203ENST00000479004 NHP2Q9NX24 153 aaKnown RBP11.86□□□□□ -0.51
TRIM8-203ENST00000479004 M0R143 59 aa11.85□□□□□ -0.51
TRIM8-203ENST00000479004 VAMP3Q15836 100 aa11.85□□□□□ -0.51
TRIM8-203ENST00000479004 BVES-AS1Q5T3Y7 98 aa11.85□□□□□ -0.51
TRIM8-203ENST00000479004 Q9BRP9 147 aa11.85□□□□□ -0.51
TRIM8-203ENST00000479004 H7C2G1 150 aa11.84□□□□□ -0.51
TRIM8-203ENST00000479004 DHRS4-AS1Q9P1J3 65 aa11.84□□□□□ -0.51
TRIM8-203ENST00000479004 ZNF706Q9Y5V0 76 aaPredicted RBP11.83□□□□□ -0.52
TRIM8-203ENST00000479004 SPRR4Q96PI1 79 aa11.82□□□□□ -0.52
TRIM8-203ENST00000479004 MUC17Q685J3 4493 aa11.82□□□□□ -0.52
TRIM8-203ENST00000479004 Q1RN00 199 aa11.81□□□□□ -0.52
TRIM8-203ENST00000479004 C3orf22Q8N5N4 141 aa11.81□□□□□ -0.52
TRIM8-203ENST00000479004 ERC2-IT1O76042 136 aa11.79□□□□□ -0.52
TRIM8-203ENST00000479004 K7ERJ3 54 aa11.78□□□□□ -0.52
TRIM8-203ENST00000479004 RETNLBQ9BQ08 111 aa11.78□□□□□ -0.52
TRIM8-203ENST00000479004 SLC25A20O43772 301 aa11.76□□□□□ -0.53
TRIM8-203ENST00000479004 H0YGX0 51 aa11.73□□□□□ -0.53
TRIM8-203ENST00000479004 LINC00575Q6W349 94 aa11.73□□□□□ -0.53
TRIM8-203ENST00000479004 GAGE2AQ6NT46 116 aa11.72□□□□□ -0.53
TRIM8-203ENST00000479004 SPAG11AQ6PDA7 123 aa11.72□□□□□ -0.53
TRIM8-203ENST00000479004 LINC00483Q53H64 154 aa11.71□□□□□ -0.53
TRIM8-203ENST00000479004 ST20-AS1Q8NBB2 130 aa11.71□□□□□ -0.53
TRIM8-203ENST00000479004 hADV29S1A0JD25 119 aa11.7□□□□□ -0.54
TRIM8-203ENST00000479004 PSMB2P49721 201 aa11.7□□□□□ -0.54
TRIM8-203ENST00000479004 TRIAP1O43715 76 aa11.69□□□□□ -0.54
TRIM8-203ENST00000479004 IGLV7-46A0A075B6I9 117 aa11.68□□□□□ -0.54
TRIM8-203ENST00000479004 SNCGO76070 127 aa11.68□□□□□ -0.54
TRIM8-203ENST00000479004 COX6CP09669 75 aa11.68□□□□□ -0.54
TRIM8-203ENST00000479004 BATFQ16520 125 aa11.68□□□□□ -0.54
TRIM8-203ENST00000479004 TPRXLQ17RH7 258 aa11.68□□□□□ -0.54
TRIM8-203ENST00000479004 C4orf48Q5BLP8 95 aa11.66□□□□□ -0.54
TRIM8-203ENST00000479004 Q8NBF4 154 aa11.66□□□□□ -0.54
TRIM8-203ENST00000479004 SPRR1BP22528 89 aa11.65□□□□□ -0.54
TRIM8-203ENST00000479004 TEX49A0A1B0GTD5 131 aa11.64□□□□□ -0.55
TRIM8-203ENST00000479004 IGLV5-48A0A075B6I7 105 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms