RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 HHLA3Q9XRX5 114 aa1.95□□□□□ -2.1
CDC42BPA-212ENST00000478573 CYSLTR1Q9Y271 337 aa1.95□□□□□ -2.1
CDC42BPA-212ENST00000478573 VPS13BQ7Z7G8 4022 aa1.95□□□□□ -2.1
CDC42BPA-212ENST00000478573 DYNC1H1Q14204 4646 aaKnown RBP1.95□□□□□ -2.1
CDC42BPA-212ENST00000478573 DNAH11Q96DT5 4516 aa1.94□□□□□ -2.1
CDC42BPA-212ENST00000478573 EPPK1P58107 5090 aaKnown RBP1.94□□□□□ -2.1
CDC42BPA-212ENST00000478573 A0A087WX48 190 aa1.94□□□□□ -2.1
CDC42BPA-212ENST00000478573 TRBV10-1A0A0K0K1A3 114 aa1.94□□□□□ -2.1
CDC42BPA-212ENST00000478573 H3BUT2 72 aa1.94□□□□□ -2.1
CDC42BPA-212ENST00000478573 M0R2N4 97 aa1.94□□□□□ -2.1
CDC42BPA-212ENST00000478573 IGKCP01834 107 aa1.94□□□□□ -2.1
CDC42BPA-212ENST00000478573 ARMS2P0C7Q2 107 aa1.94□□□□□ -2.1
CDC42BPA-212ENST00000478573 S100A4P26447 101 aaKnown RBP1.94□□□□□ -2.1
CDC42BPA-212ENST00000478573 CKS2P33552 79 aa1.94□□□□□ -2.1
CDC42BPA-212ENST00000478573 ZNF80P51504 273 aaPredicted RBP1.94□□□□□ -2.1
CDC42BPA-212ENST00000478573 SMAGPQ0VAQ4 97 aa1.94□□□□□ -2.1
CDC42BPA-212ENST00000478573 ESRGQ1W209 222 aa1.94□□□□□ -2.1
CDC42BPA-212ENST00000478573 MRPL51Q4U2R6 128 aaKnown RBP1.94□□□□□ -2.1
CDC42BPA-212ENST00000478573 LINC01556Q5JQF7 62 aa1.94□□□□□ -2.1
CDC42BPA-212ENST00000478573 LELP1Q5T871 98 aa1.94□□□□□ -2.1
CDC42BPA-212ENST00000478573 CFAP126Q5VTH2 177 aa1.94□□□□□ -2.1
CDC42BPA-212ENST00000478573 ATOH7Q8N100 152 aa1.94□□□□□ -2.1
CDC42BPA-212ENST00000478573 ZC2HC1AQ96GY0 325 aa1.94□□□□□ -2.1
CDC42BPA-212ENST00000478573 SPANXB1Q9NS25 103 aaPredicted RBP1.94□□□□□ -2.1
CDC42BPA-212ENST00000478573 TRBV7-3A0A075B6L6 115 aa1.93□□□□□ -2.1
CDC42BPA-212ENST00000478573 TRBV25-1A0A075B6N4 114 aa1.93□□□□□ -2.1
CDC42BPA-212ENST00000478573 A0A0B4J2C4 111 aa1.93□□□□□ -2.1
CDC42BPA-212ENST00000478573 D6R8Y8 96 aa1.93□□□□□ -2.1
CDC42BPA-212ENST00000478573 F8VRH5 84 aa1.93□□□□□ -2.1
CDC42BPA-212ENST00000478573 H3BVH4 76 aa1.93□□□□□ -2.1
CDC42BPA-212ENST00000478573 GNRH2O43555 120 aa1.93□□□□□ -2.1
CDC42BPA-212ENST00000478573 SH2D1AO60880 128 aa1.93□□□□□ -2.1
CDC42BPA-212ENST00000478573 IGKV4-1P06312 121 aa1.93□□□□□ -2.1
CDC42BPA-212ENST00000478573 IFI27P40305 119 aaPredicted RBP1.93□□□□□ -2.1
CDC42BPA-212ENST00000478573 UBE2D1P51668 147 aa1.93□□□□□ -2.1
CDC42BPA-212ENST00000478573 MP68P56378 58 aa1.93□□□□□ -2.1
CDC42BPA-212ENST00000478573 UBE2D3P61077 147 aa1.93□□□□□ -2.1
CDC42BPA-212ENST00000478573 UBE2D2P62837 147 aa1.93□□□□□ -2.1
CDC42BPA-212ENST00000478573 LYPD5Q6UWN5 251 aa1.93□□□□□ -2.1
CDC42BPA-212ENST00000478573 LYZL1Q6UWQ5 148 aa1.93□□□□□ -2.1
CDC42BPA-212ENST00000478573 FAM19A3Q7Z5A8 133 aa1.93□□□□□ -2.1
CDC42BPA-212ENST00000478573 WFDC10BQ8IUB3 73 aa1.93□□□□□ -2.1
CDC42BPA-212ENST00000478573 PPDPFLQ8WWR9 84 aa1.93□□□□□ -2.1
CDC42BPA-212ENST00000478573 GTSF1LQ9H1H1 148 aa1.93□□□□□ -2.1
CDC42BPA-212ENST00000478573 DNAH5Q8TE73 4624 aa1.92□□□□□ -2.1
CDC42BPA-212ENST00000478573 HERC2O95714 4834 aa1.92□□□□□ -2.1
CDC42BPA-212ENST00000478573 TRBV6-5A0A0K0K1A5 114 aa1.92□□□□□ -2.1
CDC42BPA-212ENST00000478573 MYMXA0A1B0GTQ4 84 aa1.92□□□□□ -2.1
CDC42BPA-212ENST00000478573 A0A1B0GU33 70 aa1.92□□□□□ -2.1
CDC42BPA-212ENST00000478573 IBA57-AS1B1ANH7 110 aa1.92□□□□□ -2.1
CDC42BPA-212ENST00000478573 NPYP01303 97 aa1.92□□□□□ -2.1
CDC42BPA-212ENST00000478573 CRYGDP07320 174 aa1.92□□□□□ -2.1
CDC42BPA-212ENST00000478573 CRIP1P50238 77 aa1.92□□□□□ -2.1
CDC42BPA-212ENST00000478573 TEN1Q86WV5 123 aa1.92□□□□□ -2.1
CDC42BPA-212ENST00000478573 TOMM6Q96B49 74 aa1.92□□□□□ -2.1
CDC42BPA-212ENST00000478573 TMEM141Q96I45 108 aa1.92□□□□□ -2.1
CDC42BPA-212ENST00000478573 SMIM2Q9BVW6 85 aa1.92□□□□□ -2.1
CDC42BPA-212ENST00000478573 IMUPQ9GZP8 106 aa1.92□□□□□ -2.1
CDC42BPA-212ENST00000478573 PHLDA3Q9Y5J5 127 aa1.92□□□□□ -2.1
CDC42BPA-212ENST00000478573 PKHD1L1Q86WI1 4243 aa1.92□□□□□ -2.1
CDC42BPA-212ENST00000478573 HSPG2P98160 4391 aa1.92□□□□□ -2.1
CDC42BPA-212ENST00000478573 A0A087WTM6 91 aa1.91□□□□□ -2.1
CDC42BPA-212ENST00000478573 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.91□□□□□ -2.1
CDC42BPA-212ENST00000478573 SDHAF1A6NFY7 115 aa1.91□□□□□ -2.1
CDC42BPA-212ENST00000478573 C11orf86A6NJI1 115 aa1.91□□□□□ -2.1
CDC42BPA-212ENST00000478573 APOMO95445 188 aa1.91□□□□□ -2.1
CDC42BPA-212ENST00000478573 NCR2O95944 276 aa1.91□□□□□ -2.1
CDC42BPA-212ENST00000478573 ACYP1P07311 99 aa1.91□□□□□ -2.1
CDC42BPA-212ENST00000478573 LGALS3P17931 250 aaKnown RBP1.91□□□□□ -2.1
CDC42BPA-212ENST00000478573 FXYD2P54710 66 aa1.91□□□□□ -2.1
CDC42BPA-212ENST00000478573 CKS1BP61024 79 aa1.91□□□□□ -2.1
CDC42BPA-212ENST00000478573 ZNF56Q15929 161 aa1.91□□□□□ -2.1
CDC42BPA-212ENST00000478573 FAM74A4Q5TZK3 123 aa1.91□□□□□ -2.1
CDC42BPA-212ENST00000478573 COPS9Q8WXC6 57 aa1.91□□□□□ -2.1
CDC42BPA-212ENST00000478573 DNAJC30Q96LL9 226 aa1.91□□□□□ -2.1
CDC42BPA-212ENST00000478573 NHP2Q9NX24 153 aaKnown RBP1.91□□□□□ -2.1
CDC42BPA-212ENST00000478573 APOBP04114 4563 aaKnown RBP1.91□□□□□ -2.1
CDC42BPA-212ENST00000478573 LRP1BQ9NZR2 4599 aa1.91□□□□□ -2.1
CDC42BPA-212ENST00000478573 TRBV30A0A0K0K1B3 111 aa1.9□□□□□ -2.11
CDC42BPA-212ENST00000478573 A6NED7 52 aa1.9□□□□□ -2.11
CDC42BPA-212ENST00000478573 H3BT86 120 aa1.9□□□□□ -2.11
CDC42BPA-212ENST00000478573 PSCAO43653 123 aa1.9□□□□□ -2.11
CDC42BPA-212ENST00000478573 TIMM17BO60830 172 aa1.9□□□□□ -2.11
CDC42BPA-212ENST00000478573 IFITM1P13164 125 aa1.9□□□□□ -2.11
CDC42BPA-212ENST00000478573 SPANXN1Q5VSR9 72 aa1.9□□□□□ -2.11
CDC42BPA-212ENST00000478573 Q6ZUT4 128 aa1.9□□□□□ -2.11
CDC42BPA-212ENST00000478573 PLEKHB2Q96CS7 222 aa1.9□□□□□ -2.11
CDC42BPA-212ENST00000478573 TMEM126AQ9H061 195 aa1.9□□□□□ -2.11
CDC42BPA-212ENST00000478573 DPH3P1Q9H4G8 78 aa1.9□□□□□ -2.11
CDC42BPA-212ENST00000478573 MRPL35Q9NZE8 188 aaKnown RBP1.9□□□□□ -2.11
CDC42BPA-212ENST00000478573 ERG28Q9UKR5 140 aa1.9□□□□□ -2.11
CDC42BPA-212ENST00000478573 RYR1P21817 5038 aa1.89□□□□□ -2.11
CDC42BPA-212ENST00000478573 TMSB15BA0A087X1C1 80 aa1.89□□□□□ -2.11
CDC42BPA-212ENST00000478573 IGKV2D-26A0A0A0MRZ7 120 aa1.89□□□□□ -2.11
CDC42BPA-212ENST00000478573 TRBV6-8A0A0A6YYG3 113 aa1.89□□□□□ -2.11
CDC42BPA-212ENST00000478573 IGHV3-73A0A0B4J1V6 119 aa1.89□□□□□ -2.11
CDC42BPA-212ENST00000478573 TRAV26-2A0A0B4J265 109 aa1.89□□□□□ -2.11
CDC42BPA-212ENST00000478573 TRBV27A0A0K0K1C4 114 aa1.89□□□□□ -2.11
CDC42BPA-212ENST00000478573 IGHV3-30P01768 117 aa1.89□□□□□ -2.11
CDC42BPA-212ENST00000478573 IGHV3-33P01772 117 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms