RNA–Protein interactions for RNA: ENST00000478238.1

SYCP3-205, Transcript of synaptonemal complex protein 3, humanhuman

TSL 3

Gene SYCP3, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-205ENST00000478238 NRXN1Q9ULB1 1477 aa-0.67□□□□□ -2.52
SYCP3-205ENST00000478238 RAPGEF2Q9Y4G8 1499 aa-0.67□□□□□ -2.52
SYCP3-205ENST00000478238 RGPD3A6NKT7 1758 aaPredicted RBP-0.68□□□□□ -2.52
SYCP3-205ENST00000478238 RGPD4Q7Z3J3 1758 aa-0.68□□□□□ -2.52
SYCP3-205ENST00000478238 PRDM15P57071 1507 aaPredicted RBP-0.68□□□□□ -2.52
SYCP3-205ENST00000478238 C20orf202A1L168 122 aa-0.68□□□□□ -2.52
SYCP3-205ENST00000478238 IGLC2P0DOY2 106 aa-0.68□□□□□ -2.52
SYCP3-205ENST00000478238 IGLC3P0DOY3 106 aa-0.68□□□□□ -2.52
SYCP3-205ENST00000478238 PMCHL2Q9BQD1 86 aa-0.68□□□□□ -2.52
SYCP3-205ENST00000478238 PSENENQ9NZ42 101 aa-0.68□□□□□ -2.52
SYCP3-205ENST00000478238 SCN11AQ9UI33 1791 aa-0.68□□□□□ -2.52
SYCP3-205ENST00000478238 ZFYVE16Q7Z3T8 1539 aa-0.69□□□□□ -2.52
SYCP3-205ENST00000478238 ABCC2Q92887 1545 aa-0.69□□□□□ -2.52
SYCP3-205ENST00000478238 FAM135AQ9P2D6 1515 aa-0.69□□□□□ -2.52
SYCP3-205ENST00000478238 ANKRD36BQ8N2N9 1353 aa-0.69□□□□□ -2.52
SYCP3-205ENST00000478238 RGPD1P0DJD0 1748 aa-0.69□□□□□ -2.52
SYCP3-205ENST00000478238 TIAM2Q8IVF5 1701 aa-0.69□□□□□ -2.52
SYCP3-205ENST00000478238 ABCA13Q86UQ4 5058 aa-0.69□□□□□ -2.52
SYCP3-205ENST00000478238 RGPD8O14715 1765 aaPredicted RBP-0.69□□□□□ -2.52
SYCP3-205ENST00000478238 RGPD5Q99666 1765 aa-0.69□□□□□ -2.52
SYCP3-205ENST00000478238 MPC2O95563 127 aa-0.69□□□□□ -2.52
SYCP3-205ENST00000478238 MT-ATP8P03928 68 aa-0.69□□□□□ -2.52
SYCP3-205ENST00000478238 NMSQ5H8A3 153 aa-0.69□□□□□ -2.52
SYCP3-205ENST00000478238 GCN1Q92616 2671 aaKnown RBP-0.69□□□□□ -2.52
SYCP3-205ENST00000478238 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.69□□□□□ -2.52
SYCP3-205ENST00000478238 SUPT6HQ7KZ85 1726 aaKnown RBP-0.69□□□□□ -2.52
SYCP3-205ENST00000478238 APOBP04114 4563 aaKnown RBP-0.7□□□□□ -2.52
SYCP3-205ENST00000478238 D6R8Y8 96 aa-0.7□□□□□ -2.52
SYCP3-205ENST00000478238 F8WEM9 126 aa-0.7□□□□□ -2.52
SYCP3-205ENST00000478238 NDUFA3O95167 84 aa-0.7□□□□□ -2.52
SYCP3-205ENST00000478238 LEPROTL1O95214 131 aa-0.7□□□□□ -2.52
SYCP3-205ENST00000478238 ETDBQ3ZM63 59 aa-0.7□□□□□ -2.52
SYCP3-205ENST00000478238 MUSTN1Q8IVN3 82 aa-0.7□□□□□ -2.52
SYCP3-205ENST00000478238 MAGI2Q86UL8 1455 aa-0.7□□□□□ -2.52
SYCP3-205ENST00000478238 RELNP78509 3460 aa-0.7□□□□□ -2.52
SYCP3-205ENST00000478238 ALKQ9UM73 1620 aa-0.71□□□□□ -2.52
SYCP3-205ENST00000478238 ATOX1O00244 68 aa-0.71□□□□□ -2.52
SYCP3-205ENST00000478238 SERP2Q8N6R1 65 aa-0.71□□□□□ -2.52
SYCP3-205ENST00000478238 NBEAQ8NFP9 2946 aa-0.71□□□□□ -2.52
SYCP3-205ENST00000478238 ANK3Q12955 4377 aaKnown RBP-0.71□□□□□ -2.52
SYCP3-205ENST00000478238 UBR1Q8IWV7 1749 aa-0.72□□□□□ -2.52
SYCP3-205ENST00000478238 SPENQ96T58 3664 aaKnown RBP-0.72□□□□□ -2.52
SYCP3-205ENST00000478238 LRRC7Q96NW7 1537 aa-0.72□□□□□ -2.52
SYCP3-205ENST00000478238 COX7BP24311 80 aa-0.72□□□□□ -2.52
SYCP3-205ENST00000478238 S100A10P60903 97 aa-0.72□□□□□ -2.52
SYCP3-205ENST00000478238 HMGN3Q15651 99 aa-0.72□□□□□ -2.52
SYCP3-205ENST00000478238 COL5A1-AS1Q5SY13 56 aa-0.72□□□□□ -2.52
SYCP3-205ENST00000478238 ALKAL2Q6UX46 152 aa-0.72□□□□□ -2.52
SYCP3-205ENST00000478238 ZNF720Q7Z2F6 126 aa-0.72□□□□□ -2.52
SYCP3-205ENST00000478238 BIRC6Q9NR09 4857 aa-0.72□□□□□ -2.52
SYCP3-205ENST00000478238 DSPP15924 2871 aaKnown RBP-0.72□□□□□ -2.53
SYCP3-205ENST00000478238 WDR87Q6ZQQ6 2873 aa-0.72□□□□□ -2.53
SYCP3-205ENST00000478238 POLR1AO95602 1720 aaPredicted RBP-0.72□□□□□ -2.53
SYCP3-205ENST00000478238 ANKRD50Q9ULJ7 1429 aa-0.72□□□□□ -2.53
SYCP3-205ENST00000478238 LTN1O94822 1766 aa-0.73□□□□□ -2.53
SYCP3-205ENST00000478238 ACACAQ13085 2346 aa-0.73□□□□□ -2.53
SYCP3-205ENST00000478238 DNAH11Q96DT5 4516 aa-0.73□□□□□ -2.53
SYCP3-205ENST00000478238 UQCRHLA0A096LP55 91 aa-0.73□□□□□ -2.53
SYCP3-205ENST00000478238 C9orf92A6NGG3 77 aa-0.73□□□□□ -2.53
SYCP3-205ENST00000478238 FAUP35544 74 aaKnown RBP-0.73□□□□□ -2.53
SYCP3-205ENST00000478238 TRIOO75962 3097 aa-0.73□□□□□ -2.53
SYCP3-205ENST00000478238 LRRC9Q6ZRR7 1453 aa-0.73□□□□□ -2.53
SYCP3-205ENST00000478238 COX6B2Q6YFQ2 88 aa-0.74□□□□□ -2.53
SYCP3-205ENST00000478238 UBE2D4Q9Y2X8 147 aa-0.74□□□□□ -2.53
SYCP3-205ENST00000478238 LRRK2Q5S007 2527 aa-0.74□□□□□ -2.53
SYCP3-205ENST00000478238 LAMA2P24043 3122 aaKnown RBP-0.74□□□□□ -2.53
SYCP3-205ENST00000478238 FYCO1Q9BQS8 1478 aa-0.74□□□□□ -2.53
SYCP3-205ENST00000478238 MTORP42345 2549 aa-0.75□□□□□ -2.53
SYCP3-205ENST00000478238 RPL38P63173 70 aaKnown RBP-0.75□□□□□ -2.53
SYCP3-205ENST00000478238 NESP48681 1621 aa-0.75□□□□□ -2.53
SYCP3-205ENST00000478238 USP32Q8NFA0 1604 aa-0.75□□□□□ -2.53
SYCP3-205ENST00000478238 DOT1LQ8TEK3 1739 aa-0.75□□□□□ -2.53
SYCP3-205ENST00000478238 LAMA3Q16787 3333 aa-0.76□□□□□ -2.53
SYCP3-205ENST00000478238 NBEAL2Q6ZNJ1 2754 aa-0.76□□□□□ -2.53
SYCP3-205ENST00000478238 NIPBLQ6KC79 2804 aaeCLIP-0.76□□□□□ -2.53
SYCP3-205ENST00000478238 IQCF6A8MYZ5 107 aa-0.76□□□□□ -2.53
SYCP3-205ENST00000478238 LINC00032P0C843 101 aa-0.76□□□□□ -2.53
SYCP3-205ENST00000478238 SARNPP82979 210 aaKnown RBP-0.76□□□□□ -2.53
SYCP3-205ENST00000478238 C14orf144Q96I85 54 aa-0.76□□□□□ -2.53
SYCP3-205ENST00000478238 GAFA1Q96PS6 74 aa-0.76□□□□□ -2.53
SYCP3-205ENST00000478238 DNAH1Q9P2D7 4330 aa-0.76□□□□□ -2.53
SYCP3-205ENST00000478238 ANKRD26Q9UPS8 1709 aa-0.76□□□□□ -2.53
SYCP3-205ENST00000478238 CCDC168Q8NDH2 2452 aa-0.76□□□□□ -2.53
SYCP3-205ENST00000478238 MGAM2Q2M2H8 2515 aa-0.76□□□□□ -2.53
SYCP3-205ENST00000478238 UTP20O75691 2785 aaKnown RBP-0.76□□□□□ -2.53
SYCP3-205ENST00000478238 DNAH2Q9P225 4427 aa-0.77□□□□□ -2.53
SYCP3-205ENST00000478238 AKAP12Q02952 1782 aa-0.77□□□□□ -2.53
SYCP3-205ENST00000478238 MYO3AQ8NEV4 1616 aa-0.77□□□□□ -2.53
SYCP3-205ENST00000478238 TEX14Q8IWB6 1497 aa-0.77□□□□□ -2.53
SYCP3-205ENST00000478238 A0A1B0GUT8 65 aa-0.77□□□□□ -2.53
SYCP3-205ENST00000478238 DPY30Q9C005 99 aa-0.77□□□□□ -2.53
SYCP3-205ENST00000478238 RANBP2P49792 3224 aaKnown RBP-0.77□□□□□ -2.53
SYCP3-205ENST00000478238 PKD1L2Q7Z442 2459 aa-0.77□□□□□ -2.53
SYCP3-205ENST00000478238 PLXNC1O60486 1568 aa-0.78□□□□□ -2.53
SYCP3-205ENST00000478238 EPRSP07814 1512 aaKnown RBP-0.78□□□□□ -2.53
SYCP3-205ENST00000478238 MAP3K1Q13233 1512 aa-0.78□□□□□ -2.53
SYCP3-205ENST00000478238 FANCAO15360 1455 aa-0.78□□□□□ -2.53
SYCP3-205ENST00000478238 ATP6V1G2-DDX39BF2Z307 99 aa-0.78□□□□□ -2.53
SYCP3-205ENST00000478238 S100PP25815 95 aa-0.78□□□□□ -2.53
SYCP3-205ENST00000478238 LINC00158P58513 81 aa-0.78□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms