RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 K7EIL1 84 aa12.37□□□□□ -0.43
VARS2-209ENST00000477288 IGLV1-50A0A075B6I6 118 aa12.36□□□□□ -0.43
VARS2-209ENST00000477288 KLK9Q2XQG4 91 aa12.36□□□□□ -0.43
VARS2-209ENST00000477288 LINC00304Q8N9R0 145 aa12.36□□□□□ -0.43
VARS2-209ENST00000477288 SMR3BP02814 79 aaPredicted RBP12.35□□□□□ -0.43
VARS2-209ENST00000477288 UQCR11O14957 56 aa12.35□□□□□ -0.43
VARS2-209ENST00000477288 IGFL1Q6UW32 110 aa12.32□□□□□ -0.44
VARS2-209ENST00000477288 HECTD1Q9ULT8 2610 aa12.31□□□□□ -0.44
VARS2-209ENST00000477288 C8orf17Q9NRJ1 99 aa12.3□□□□□ -0.44
VARS2-209ENST00000477288 MIR22HGQ0VDD5 57 aa12.29□□□□□ -0.44
VARS2-209ENST00000477288 LITAFQ99732 161 aa12.29□□□□□ -0.44
VARS2-209ENST00000477288 LINC01554Q52M75 96 aa12.28□□□□□ -0.44
VARS2-209ENST00000477288 A0A0G2JQZ4 141 aa12.28□□□□□ -0.44
VARS2-209ENST00000477288 A0A1W2PNN7 141 aa12.28□□□□□ -0.44
VARS2-209ENST00000477288 IGLV5-37A0A075B6J1 123 aa12.27□□□□□ -0.45
VARS2-209ENST00000477288 C9orf129Q5T035 196 aaKnown RBP12.27□□□□□ -0.45
VARS2-209ENST00000477288 CSNK1G2-AS1Q8NCQ2 148 aa12.26□□□□□ -0.45
VARS2-209ENST00000477288 KCNQ1DNQ9H478 68 aa12.26□□□□□ -0.45
VARS2-209ENST00000477288 ANAPC11Q9NYG5 84 aa12.25□□□□□ -0.45
VARS2-209ENST00000477288 ZNF861PO60384 105 aa12.25□□□□□ -0.45
VARS2-209ENST00000477288 A0A087WTM6 91 aa12.23□□□□□ -0.45
VARS2-209ENST00000477288 A0A1B0GVX0 72 aa12.23□□□□□ -0.45
VARS2-209ENST00000477288 PRR15Q8IV56 129 aa12.22□□□□□ -0.45
VARS2-209ENST00000477288 CYP4F30PQ9H0H9 118 aa12.22□□□□□ -0.45
VARS2-209ENST00000477288 C15orf56Q8N910 161 aa12.22□□□□□ -0.45
VARS2-209ENST00000477288 LINC00528Q8N1L1 170 aa12.21□□□□□ -0.45
VARS2-209ENST00000477288 C19orf73Q9NVV2 129 aa12.21□□□□□ -0.45
VARS2-209ENST00000477288 A0A0D9SG42 100 aa12.21□□□□□ -0.46
VARS2-209ENST00000477288 CHD7Q9P2D1 2997 aa12.19□□□□□ -0.46
VARS2-209ENST00000477288 ERC2-IT1O76042 136 aa12.19□□□□□ -0.46
VARS2-209ENST00000477288 RBM12B-AS1Q9P1G2 102 aa12.18□□□□□ -0.46
VARS2-209ENST00000477288 KRTAP10-3P60369 221 aa12.17□□□□□ -0.46
VARS2-209ENST00000477288 USP24Q9UPU5 2620 aa12.16□□□□□ -0.46
VARS2-209ENST00000477288 Q8N377 158 aa12.15□□□□□ -0.46
VARS2-209ENST00000477288 MGAM2Q2M2H8 2515 aa12.13□□□□□ -0.47
VARS2-209ENST00000477288 PRR34Q9NV39 138 aa12.13□□□□□ -0.47
VARS2-209ENST00000477288 A0A096LNT2 108 aa12.13□□□□□ -0.47
VARS2-209ENST00000477288 IGLV7-43P04211 117 aa12.12□□□□□ -0.47
VARS2-209ENST00000477288 EIF4EBP3O60516 100 aaPredicted RBP12.1□□□□□ -0.47
VARS2-209ENST00000477288 Q8N1X5 172 aa12.1□□□□□ -0.47
VARS2-209ENST00000477288 C9orf163Q8N9P6 203 aa12.1□□□□□ -0.47
VARS2-209ENST00000477288 LINC00336Q6ZUF6 198 aa12.1□□□□□ -0.47
VARS2-209ENST00000477288 PCNTO95613 3336 aa12.09□□□□□ -0.47
VARS2-209ENST00000477288 IGLV5-48A0A075B6I7 105 aa12.07□□□□□ -0.48
VARS2-209ENST00000477288 PSORS1C2Q9UIG4 136 aa12.07□□□□□ -0.48
VARS2-209ENST00000477288 CDC42SE1Q9NRR8 79 aa12.06□□□□□ -0.48
VARS2-209ENST00000477288 GIG44P09565 113 aaPredicted RBP12.05□□□□□ -0.48
VARS2-209ENST00000477288 CASC10Q5T4H9 136 aa12.03□□□□□ -0.48
VARS2-209ENST00000477288 ZNF575Q86XF7 245 aa12.03□□□□□ -0.48
VARS2-209ENST00000477288 TLX1NBP0CAT3 122 aa12.03□□□□□ -0.48
VARS2-209ENST00000477288 FAM104AQ969W3 186 aa12.02□□□□□ -0.49
VARS2-209ENST00000477288 PLA2G2DQ9UNK4 145 aa12.01□□□□□ -0.49
VARS2-209ENST00000477288 CHD9Q3L8U1 2897 aa12□□□□□ -0.49
VARS2-209ENST00000477288 C5orf42Q9H799 3197 aa12□□□□□ -0.49
VARS2-209ENST00000477288 SPRR4Q96PI1 79 aa11.99□□□□□ -0.49
VARS2-209ENST00000477288 RANBP2P49792 3224 aaKnown RBP11.99□□□□□ -0.49
VARS2-209ENST00000477288 KLKP1Q107X0 134 aa11.98□□□□□ -0.49
VARS2-209ENST00000477288 FLNAP21333 2647 aaKnown RBP11.97□□□□□ -0.49
VARS2-209ENST00000477288 LINC00612Q8N6U2 182 aa11.97□□□□□ -0.49
VARS2-209ENST00000477288 CENPEQ02224 2701 aa11.95□□□□□ -0.5
VARS2-209ENST00000477288 HELZ2Q9BYK8 2649 aaKnown RBP11.95□□□□□ -0.5
VARS2-209ENST00000477288 BPTFQ12830 3046 aa11.95□□□□□ -0.5
VARS2-209ENST00000477288 MAST4O15021 2626 aa11.94□□□□□ -0.5
VARS2-209ENST00000477288 HTTP42858 3142 aa11.94□□□□□ -0.5
VARS2-209ENST00000477288 ATRQ13535 2644 aa11.93□□□□□ -0.5
VARS2-209ENST00000477288 ITPR3Q14573 2671 aa11.92□□□□□ -0.5
VARS2-209ENST00000477288 CNBPP62633 177 aaKnown RBP11.92□□□□□ -0.5
VARS2-209ENST00000477288 H7BZZ5 65 aa11.91□□□□□ -0.5
VARS2-209ENST00000477288 KTN1-AS1Q86SY8 53 aa11.9□□□□□ -0.51
VARS2-209ENST00000477288 A0A1W2PNM2 257 aa11.89□□□□□ -0.51
VARS2-209ENST00000477288 Q6ZSA8 131 aa11.89□□□□□ -0.51
VARS2-209ENST00000477288 LUZP6Q538Z0 58 aa11.89□□□□□ -0.51
VARS2-209ENST00000477288 LCA10Q71F78 164 aa11.88□□□□□ -0.51
VARS2-209ENST00000477288 KRTAP1-3Q8IUG1 177 aa11.86□□□□□ -0.51
VARS2-209ENST00000477288 CFAP46Q8IYW2 2715 aa11.86□□□□□ -0.51
VARS2-209ENST00000477288 M0R2T5 61 aa11.86□□□□□ -0.51
VARS2-209ENST00000477288 CAMK2N1Q7Z7J9 78 aa11.85□□□□□ -0.51
VARS2-209ENST00000477288 TNP2Q05952 138 aa11.85□□□□□ -0.51
VARS2-209ENST00000477288 CD164Q04900 197 aa11.85□□□□□ -0.51
VARS2-209ENST00000477288 PRR26Q8N8Z3 221 aa11.82□□□□□ -0.52
VARS2-209ENST00000477288 IGLV7-46A0A075B6I9 117 aa11.79□□□□□ -0.52
VARS2-209ENST00000477288 SPANXA2-OT1Q8N9U9 137 aa11.79□□□□□ -0.52
VARS2-209ENST00000477288 KRTAP1-1Q07627 177 aa11.79□□□□□ -0.52
VARS2-209ENST00000477288 TRANK1O15050 2925 aa11.76□□□□□ -0.53
VARS2-209ENST00000477288 ZNF292O60281 2723 aa11.74□□□□□ -0.53
VARS2-209ENST00000477288 LINC00483Q53H64 154 aa11.74□□□□□ -0.53
VARS2-209ENST00000477288 Q1T7F1 81 aa11.73□□□□□ -0.53
VARS2-209ENST00000477288 LAMA3Q16787 3333 aa11.72□□□□□ -0.53
VARS2-209ENST00000477288 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.69□□□□□ -0.54
VARS2-209ENST00000477288 A0A1B0GU33 70 aa11.68□□□□□ -0.54
VARS2-209ENST00000477288 MKI67P46013 3256 aaKnown RBP11.66□□□□□ -0.54
VARS2-209ENST00000477288 MGAQ8IWI9 3026 aa11.65□□□□□ -0.54
VARS2-209ENST00000477288 HRES1P13985 223 aa11.63□□□□□ -0.55
VARS2-209ENST00000477288 OCR1Q9BZK8 76 aa11.57□□□□□ -0.56
VARS2-209ENST00000477288 CFAP54Q96N23 3096 aa11.57□□□□□ -0.56
VARS2-209ENST00000477288 S4R3F8 94 aa11.56□□□□□ -0.56
VARS2-209ENST00000477288 WIPF1O43516 503 aa11.56□□□□□ -0.56
VARS2-209ENST00000477288 BRCA2P51587 3418 aa11.55□□□□□ -0.56
VARS2-209ENST00000477288 AKAP13Q12802 2813 aa11.53□□□□□ -0.56
VARS2-209ENST00000477288 CSAG1Q6PB30 78 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms