RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 SPANXDQ9BXN6 97 aa8.14□□□□□ -1.11
HLA-DPA1-246ENST00000476642 SPANXB1Q9NS25 103 aaPredicted RBP8.14□□□□□ -1.11
HLA-DPA1-246ENST00000476642 SPANXCQ9NY87 97 aa8.14□□□□□ -1.11
HLA-DPA1-246ENST00000476642 IGLV7-43P04211 117 aa8.13□□□□□ -1.11
HLA-DPA1-246ENST00000476642 TAL2Q16559 108 aa8.13□□□□□ -1.11
HLA-DPA1-246ENST00000476642 LINC00308Q8TCZ7 52 aa8.13□□□□□ -1.11
HLA-DPA1-246ENST00000476642 PPDPFQ9H3Y8 114 aa8.13□□□□□ -1.11
HLA-DPA1-246ENST00000476642 SPCS1Q9Y6A9 102 aa8.13□□□□□ -1.11
HLA-DPA1-246ENST00000476642 IGKV2-28A0A075B6P5 120 aa8.12□□□□□ -1.11
HLA-DPA1-246ENST00000476642 H3BUT2 72 aa8.12□□□□□ -1.11
HLA-DPA1-246ENST00000476642 BCE1O60756 84 aa8.12□□□□□ -1.11
HLA-DPA1-246ENST00000476642 IGKV2D-28P01615 120 aa8.12□□□□□ -1.11
HLA-DPA1-246ENST00000476642 NCR3O14931 201 aa8.11□□□□□ -1.11
HLA-DPA1-246ENST00000476642 OXTP01178 125 aa8.11□□□□□ -1.11
HLA-DPA1-246ENST00000476642 RPL28P46779 137 aaKnown RBP8.11□□□□□ -1.11
HLA-DPA1-246ENST00000476642 NPC2P61916 151 aa8.11□□□□□ -1.11
HLA-DPA1-246ENST00000476642 REG3GQ6UW15 175 aa8.11□□□□□ -1.11
HLA-DPA1-246ENST00000476642 KRTAP11-1Q8IUC1 163 aa8.11□□□□□ -1.11
HLA-DPA1-246ENST00000476642 Q8NDZ9 215 aa8.11□□□□□ -1.11
HLA-DPA1-246ENST00000476642 DIRC1Q969H9 104 aa8.11□□□□□ -1.11
HLA-DPA1-246ENST00000476642 SRSF9Q13242 221 aaKnown RBP eCLIP8.1□□□□□ -1.11
HLA-DPA1-246ENST00000476642 S100A7L2Q5SY68 101 aa8.1□□□□□ -1.11
HLA-DPA1-246ENST00000476642 PRYO14603 147 aa8.09□□□□□ -1.11
HLA-DPA1-246ENST00000476642 ZNF861PO60384 105 aa8.09□□□□□ -1.11
HLA-DPA1-246ENST00000476642 SOSTDC1Q6X4U4 206 aa8.09□□□□□ -1.11
HLA-DPA1-246ENST00000476642 F8W1H4 67 aa8.08□□□□□ -1.12
HLA-DPA1-246ENST00000476642 UBE2AP49459 152 aa8.08□□□□□ -1.12
HLA-DPA1-246ENST00000476642 TMEM126AQ9H061 195 aa8.08□□□□□ -1.12
HLA-DPA1-246ENST00000476642 TRBV10-3A0A0K0K1G6 114 aa8.07□□□□□ -1.12
HLA-DPA1-246ENST00000476642 KCNQ1DNQ9H478 68 aa8.07□□□□□ -1.12
HLA-DPA1-246ENST00000476642 H0Y9J4 135 aa8.05□□□□□ -1.12
HLA-DPA1-246ENST00000476642 IGLV6-57P01721 117 aa8.05□□□□□ -1.12
HLA-DPA1-246ENST00000476642 FAM19A1Q7Z5A9 133 aa8.05□□□□□ -1.12
HLA-DPA1-246ENST00000476642 MUSTN1Q8IVN3 82 aa8.05□□□□□ -1.12
HLA-DPA1-246ENST00000476642 MTURNQ8N3F0 131 aa8.05□□□□□ -1.12
HLA-DPA1-246ENST00000476642 LINC00337Q8N6G1 96 aa8.05□□□□□ -1.12
HLA-DPA1-246ENST00000476642 SIGMAR1Q99720 223 aa8.05□□□□□ -1.12
HLA-DPA1-246ENST00000476642 A0A1B0GV72 72 aa8.04□□□□□ -1.12
HLA-DPA1-246ENST00000476642 ETDCA0A1B0GVM5 59 aa8.04□□□□□ -1.12
HLA-DPA1-246ENST00000476642 EIF4EBP3O60516 100 aaPredicted RBP8.04□□□□□ -1.12
HLA-DPA1-246ENST00000476642 CEND1Q8N111 149 aa8.04□□□□□ -1.12
HLA-DPA1-246ENST00000476642 OR13C6PQ8NH95 151 aa8.04□□□□□ -1.12
HLA-DPA1-246ENST00000476642 RAB37Q96AX2 223 aa8.04□□□□□ -1.12
HLA-DPA1-246ENST00000476642 SPRR1AP35321 89 aa8.03□□□□□ -1.12
HLA-DPA1-246ENST00000476642 LYRM7Q5U5X0 104 aa8.03□□□□□ -1.12
HLA-DPA1-246ENST00000476642 HIST1H4GQ99525 98 aa8.03□□□□□ -1.12
HLA-DPA1-246ENST00000476642 TRAV23DV6A0A075B6W5 121 aa8.02□□□□□ -1.13
HLA-DPA1-246ENST00000476642 TRAV13-2A0A0B4J235 113 aa8.02□□□□□ -1.13
HLA-DPA1-246ENST00000476642 TMEM238LA0A1B0GVL6 79 aa8.01□□□□□ -1.13
HLA-DPA1-246ENST00000476642 A6NJY4 79 aa8.01□□□□□ -1.13
HLA-DPA1-246ENST00000476642 KRTAP13-1Q8IUC0 172 aa8.01□□□□□ -1.13
HLA-DPA1-246ENST00000476642 PRLHP81277 87 aa8□□□□□ -1.13
HLA-DPA1-246ENST00000476642 ZNF73O43830 326 aaPredicted RBP7.99□□□□□ -1.13
HLA-DPA1-246ENST00000476642 FXYD2P54710 66 aa7.99□□□□□ -1.13
HLA-DPA1-246ENST00000476642 LINC01600Q96MT4 127 aa7.99□□□□□ -1.13
HLA-DPA1-246ENST00000476642 NHP2Q9NX24 153 aaKnown RBP7.99□□□□□ -1.13
HLA-DPA1-246ENST00000476642 A0A1B0GWB2 263 aa7.98□□□□□ -1.13
HLA-DPA1-246ENST00000476642 KRTAP4-16G5E9R7 235 aaPredicted RBP7.98□□□□□ -1.13
HLA-DPA1-246ENST00000476642 A4D1N5 150 aa7.97□□□□□ -1.13
HLA-DPA1-246ENST00000476642 HIGD2AQ9BW72 106 aa7.97□□□□□ -1.13
HLA-DPA1-246ENST00000476642 ZNF706Q9Y5V0 76 aaPredicted RBP7.97□□□□□ -1.13
HLA-DPA1-246ENST00000476642 PKHD1L1Q86WI1 4243 aa7.97□□□□□ -1.13
HLA-DPA1-246ENST00000476642 B5MCH6 92 aa7.96□□□□□ -1.14
HLA-DPA1-246ENST00000476642 Q6ZRX8 168 aa7.96□□□□□ -1.14
HLA-DPA1-246ENST00000476642 NAA38Q9BRA0 125 aaKnown RBP7.96□□□□□ -1.14
HLA-DPA1-246ENST00000476642 LRP1Q07954 4544 aaKnown RBP7.95□□□□□ -1.14
HLA-DPA1-246ENST00000476642 RPL13AP40429 203 aaKnown RBP7.95□□□□□ -1.14
HLA-DPA1-246ENST00000476642 TRBV7-6A0A0J9YX20 115 aa7.94□□□□□ -1.14
HLA-DPA1-246ENST00000476642 HMCN2Q8NDA2 5059 aa7.93□□□□□ -1.14
HLA-DPA1-246ENST00000476642 H3BMG7 143 aa7.93□□□□□ -1.14
HLA-DPA1-246ENST00000476642 K7ERJ3 54 aa7.92□□□□□ -1.14
HLA-DPA1-246ENST00000476642 KRTAP1-4P0C5Y4 121 aa7.92□□□□□ -1.14
HLA-DPA1-246ENST00000476642 COX7BP24311 80 aa7.92□□□□□ -1.14
HLA-DPA1-246ENST00000476642 FAM229BQ4G0N7 80 aa7.92□□□□□ -1.14
HLA-DPA1-246ENST00000476642 C6orf99Q4VX62 202 aa7.92□□□□□ -1.14
HLA-DPA1-246ENST00000476642 SMCR5Q8TEV8 140 aa7.92□□□□□ -1.14
HLA-DPA1-246ENST00000476642 DHRS4-AS1Q9P1J3 65 aa7.92□□□□□ -1.14
HLA-DPA1-246ENST00000476642 TRBV20-1A0A075B6N2 111 aa7.91□□□□□ -1.14
HLA-DPA1-246ENST00000476642 CRYGAP11844 174 aa7.91□□□□□ -1.14
HLA-DPA1-246ENST00000476642 ELOF1P60002 83 aaKnown RBP7.9□□□□□ -1.14
HLA-DPA1-246ENST00000476642 PRO0461Q9UI25 63 aa7.9□□□□□ -1.14
HLA-DPA1-246ENST00000476642 FAT3Q8TDW7 4589 aa7.9□□□□□ -1.15
HLA-DPA1-246ENST00000476642 A0A0B4J2C4 111 aa7.89□□□□□ -1.15
HLA-DPA1-246ENST00000476642 KRTAP10-8P60410 259 aa7.89□□□□□ -1.15
HLA-DPA1-246ENST00000476642 SMIM11BQ8TCY0 68 aa7.89□□□□□ -1.15
HLA-DPA1-246ENST00000476642 MT1HL1P0DM35 61 aa7.88□□□□□ -1.15
HLA-DPA1-246ENST00000476642 ETDBQ3ZM63 59 aa7.88□□□□□ -1.15
HLA-DPA1-246ENST00000476642 PRR26Q8N8Z3 221 aa7.88□□□□□ -1.15
HLA-DPA1-246ENST00000476642 SVIPQ8NHG7 77 aa7.88□□□□□ -1.15
HLA-DPA1-246ENST00000476642 SPRR4Q96PI1 79 aa7.88□□□□□ -1.15
HLA-DPA1-246ENST00000476642 Q9BRP9 147 aa7.88□□□□□ -1.15
HLA-DPA1-246ENST00000476642 CFC1BP0CG36 223 aa7.87□□□□□ -1.15
HLA-DPA1-246ENST00000476642 CFC1P0CG37 223 aa7.87□□□□□ -1.15
HLA-DPA1-246ENST00000476642 PPDPFLQ8WWR9 84 aa7.87□□□□□ -1.15
HLA-DPA1-246ENST00000476642 UBR4Q5T4S7 5183 aa7.87□□□□□ -1.15
HLA-DPA1-246ENST00000476642 SLC25A20O43772 301 aa7.86□□□□□ -1.15
HLA-DPA1-246ENST00000476642 KRTAP3-3Q9BYR6 98 aa7.85□□□□□ -1.15
HLA-DPA1-246ENST00000476642 KRTAP3-2Q9BYR7 98 aa7.85□□□□□ -1.15
HLA-DPA1-246ENST00000476642 PRO1854Q9UHT4 67 aa7.85□□□□□ -1.15
HLA-DPA1-246ENST00000476642 SNCGO76070 127 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms