RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 K7EMI3 77 aa2.04□□□□□ -2.08
NUP58-209ENST00000476553 TNRC6CQ9HCJ0 1690 aaKnown RBP2.03□□□□□ -2.08
NUP58-209ENST00000476553 MRPL33O75394 65 aaKnown RBP2.03□□□□□ -2.08
NUP58-209ENST00000476553 SERF2P84101 59 aa2.03□□□□□ -2.08
NUP58-209ENST00000476553 KRTAP21-3Q3LHN1 58 aa2.03□□□□□ -2.08
NUP58-209ENST00000476553 NRXN3Q9Y4C0 1643 aa2.02□□□□□ -2.09
NUP58-209ENST00000476553 DEFB131BA0A096LNP1 70 aa2.02□□□□□ -2.09
NUP58-209ENST00000476553 MRPL34Q9BQ48 92 aaKnown RBP2.02□□□□□ -2.09
NUP58-209ENST00000476553 M0R1W7 72 aa2.01□□□□□ -2.09
NUP58-209ENST00000476553 PRO0255Q9UI72 69 aa2.01□□□□□ -2.09
NUP58-209ENST00000476553 COX6A2Q02221 97 aa2□□□□□ -2.09
NUP58-209ENST00000476553 ASH1LQ9NR48 2969 aaKnown RBP2□□□□□ -2.09
NUP58-209ENST00000476553 ROS1P08922 2347 aa2□□□□□ -2.09
NUP58-209ENST00000476553 A0A0D9SG42 100 aa1.99□□□□□ -2.09
NUP58-209ENST00000476553 CMC2Q9NRP2 79 aa1.99□□□□□ -2.09
NUP58-209ENST00000476553 CACNA1EQ15878 2313 aa1.99□□□□□ -2.09
NUP58-209ENST00000476553 ABCC8Q09428 1581 aa1.98□□□□□ -2.09
NUP58-209ENST00000476553 IGIPA6NJ69 53 aa1.98□□□□□ -2.09
NUP58-209ENST00000476553 Q8IZM0 81 aa1.98□□□□□ -2.09
NUP58-209ENST00000476553 COL6A6A6NMZ7 2263 aa1.97□□□□□ -2.09
NUP58-209ENST00000476553 CCL22O00626 93 aa1.97□□□□□ -2.09
NUP58-209ENST00000476553 COX6B2Q6YFQ2 88 aa1.97□□□□□ -2.09
NUP58-209ENST00000476553 AGLP35573 1532 aa1.96□□□□□ -2.09
NUP58-209ENST00000476553 PRH1P02810 166 aa1.96□□□□□ -2.1
NUP58-209ENST00000476553 IQGAP2Q13576 1575 aa1.96□□□□□ -2.1
NUP58-209ENST00000476553 KRTAP10-4P60372 401 aaPredicted RBP1.95□□□□□ -2.1
NUP58-209ENST00000476553 PLNP26678 52 aa1.94□□□□□ -2.1
NUP58-209ENST00000476553 CRIP1P50238 77 aa1.94□□□□□ -2.1
NUP58-209ENST00000476553 TOMM5Q8N4H5 51 aa1.94□□□□□ -2.1
NUP58-209ENST00000476553 PIEZO2Q9H5I5 2752 aa1.94□□□□□ -2.1
NUP58-209ENST00000476553 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.94□□□□□ -2.19e-9■■■■■ 32.9
NUP58-209ENST00000476553 COX6B1P14854 86 aa1.93□□□□□ -2.1
NUP58-209ENST00000476553 CNOT1A5YKK6 2376 aaKnown RBP1.92□□□□□ -2.1
NUP58-209ENST00000476553 DOPEY2Q9Y3R5 2298 aa1.91□□□□□ -2.1
NUP58-209ENST00000476553 FBN3Q75N90 2809 aa1.9□□□□□ -2.1
NUP58-209ENST00000476553 NDUFA3O95167 84 aa1.9□□□□□ -2.11
NUP58-209ENST00000476553 Q5VSD8 79 aa1.9□□□□□ -2.11
NUP58-209ENST00000476553 CDKN2A-AS1Q9UH64 79 aa1.9□□□□□ -2.11
NUP58-209ENST00000476553 KIAA0586Q9BVV6 1533 aa1.9□□□□□ -2.11
NUP58-209ENST00000476553 TOGARAM1Q9Y4F4 1720 aa1.89□□□□□ -2.11
NUP58-209ENST00000476553 BPTFQ12830 3046 aa1.89□□□□□ -2.11
NUP58-209ENST00000476553 SPRR1AP35321 89 aa1.88□□□□□ -2.11
NUP58-209ENST00000476553 PRB3Q04118 309 aaPredicted RBP1.87□□□□□ -2.11
NUP58-209ENST00000476553 PRO3102Q9H379 93 aa1.87□□□□□ -2.11
NUP58-209ENST00000476553 PLCE1Q9P212 2302 aa1.87□□□□□ -2.11
NUP58-209ENST00000476553 ABRACLQ9P1F3 81 aa1.86□□□□□ -2.11
NUP58-209ENST00000476553 FAM208AQ9UK61 1670 aaKnown RBP1.86□□□□□ -2.11
NUP58-209ENST00000476553 C4AP0C0L4 1744 aa1.86□□□□□ -2.11
NUP58-209ENST00000476553 C4BP0C0L5 1744 aa1.86□□□□□ -2.11
NUP58-209ENST00000476553 SMIM27A0A1W2PRY6 76 aa1.85□□□□□ -2.11
NUP58-209ENST00000476553 H0YGX0 51 aa1.84□□□□□ -2.11
NUP58-209ENST00000476553 LELP1Q5T871 98 aa1.83□□□□□ -2.12
NUP58-209ENST00000476553 APLNQ9ULZ1 77 aa1.83□□□□□ -2.12
NUP58-209ENST00000476553 PTPRZ1P23471 2315 aaPredicted RBP1.83□□□□□ -2.12
NUP58-209ENST00000476553 DEPDC5O75140 1603 aa1.82□□□□□ -2.12
NUP58-209ENST00000476553 LYNX1G3V0Z9 82 aa1.82□□□□□ -2.12
NUP58-209ENST00000476553 LINC00158P58513 81 aa1.82□□□□□ -2.12
NUP58-209ENST00000476553 H1FX-AS1Q4G0G2 97 aa1.82□□□□□ -2.12
NUP58-209ENST00000476553 DEFB105AQ8NG35 78 aa1.82□□□□□ -2.12
NUP58-209ENST00000476553 H0YAA0 97 aa1.81□□□□□ -2.12
NUP58-209ENST00000476553 SPRR1BP22528 89 aa1.81□□□□□ -2.12
NUP58-209ENST00000476553 USF3Q68DE3 2245 aa1.81□□□□□ -2.12
NUP58-209ENST00000476553 PTPRQQ9UMZ3 2332 aa1.8□□□□□ -2.12
NUP58-209ENST00000476553 LINC01546A6NGU7 62 aa1.8□□□□□ -2.12
NUP58-209ENST00000476553 C2CD3Q4AC94 2353 aa1.79□□□□□ -2.12
NUP58-209ENST00000476553 LOC730098B7Z3J9 87 aa1.78□□□□□ -2.12
NUP58-209ENST00000476553 DDX60Q8IY21 1712 aaKnown RBP1.77□□□□□ -2.13
NUP58-209ENST00000476553 WFDC13Q8IUB5 93 aa1.76□□□□□ -2.13
NUP58-209ENST00000476553 ZNF462Q96JM2 2506 aa1.75□□□□□ -2.13
NUP58-209ENST00000476553 TMEM167BQ9NRX6 74 aa1.75□□□□□ -2.13
NUP58-209ENST00000476553 CACNA1HO95180 2353 aa1.74□□□□□ -2.13
NUP58-209ENST00000476553 CDC42BPAQ5VT25 1732 aa1.74□□□□□ -2.13
NUP58-209ENST00000476553 IQGAP1P46940 1657 aa1.74□□□□□ -2.13
NUP58-209ENST00000476553 ALMS1Q8TCU4 4167 aa1.74□□□□□ -2.13
NUP58-209ENST00000476553 HELZ2Q9BYK8 2649 aaKnown RBP1.72□□□□□ -2.13
NUP58-209ENST00000476553 MEGF8Q7Z7M0 2845 aa1.72□□□□□ -2.13
NUP58-209ENST00000476553 MINOS1Q5TGZ0 78 aa1.72□□□□□ -2.13
NUP58-209ENST00000476553 SPTBN2O15020 2390 aa1.71□□□□□ -2.14
NUP58-209ENST00000476553 TIMM8BQ9Y5J9 83 aaPredicted RBP1.71□□□□□ -2.14
NUP58-209ENST00000476553 KLK9Q2XQG4 91 aa1.7□□□□□ -2.14
NUP58-209ENST00000476553 LINC00308Q8TCZ7 52 aa1.7□□□□□ -2.14
NUP58-209ENST00000476553 LMO7Q8WWI1 1683 aa1.7□□□□□ -2.14
NUP58-209ENST00000476553 TRPM2O94759 1503 aa1.69□□□□□ -2.14
NUP58-209ENST00000476553 ATP7AQ04656 1500 aa1.68□□□□□ -2.14
NUP58-209ENST00000476553 SPINK4O60575 86 aa1.68□□□□□ -2.14
NUP58-209ENST00000476553 IAPPP10997 89 aa1.68□□□□□ -2.14
NUP58-209ENST00000476553 C6orf48Q9UBA6 75 aa1.68□□□□□ -2.14
NUP58-209ENST00000476553 TTC28Q96AY4 2481 aa1.67□□□□□ -2.14
NUP58-209ENST00000476553 ZNF292O60281 2723 aa1.67□□□□□ -2.14
NUP58-209ENST00000476553 POLQO75417 2590 aa1.65□□□□□ -2.15
NUP58-209ENST00000476553 MUC6Q6W4X9 2439 aa1.64□□□□□ -2.15
NUP58-209ENST00000476553 DEFB130BP0DP73 79 aa1.64□□□□□ -2.15
NUP58-209ENST00000476553 DEFB130AP0DP74 79 aa1.64□□□□□ -2.15
NUP58-209ENST00000476553 SPTBN1Q01082 2364 aaKnown RBP1.63□□□□□ -2.15
NUP58-209ENST00000476553 REV3LO60673 3130 aa1.62□□□□□ -2.15
NUP58-209ENST00000476553 CHD9Q3L8U1 2897 aa1.61□□□□□ -2.15
NUP58-209ENST00000476553 SAMD9LQ8IVG5 1584 aa1.6□□□□□ -2.15
NUP58-209ENST00000476553 RPS27P42677 84 aaKnown RBP1.6□□□□□ -2.15
NUP58-209ENST00000476553 RPS27LQ71UM5 84 aaKnown RBP1.6□□□□□ -2.15
NUP58-209ENST00000476553 NFAT5O94916 1531 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms