RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 A0A087WTM6 91 aa2.81□□□□□ -1.96
VPS13D-206ENST00000476045 EPM2AB3EWF7 344 aa2.81□□□□□ -1.96
VPS13D-206ENST00000476045 H3BT86 120 aa2.81□□□□□ -1.96
VPS13D-206ENST00000476045 LST1O00453 97 aa2.81□□□□□ -1.96
VPS13D-206ENST00000476045 SNCGO76070 127 aa2.81□□□□□ -1.96
VPS13D-206ENST00000476045 LELP1Q5T871 98 aa2.81□□□□□ -1.96
VPS13D-206ENST00000476045 CD164L2Q6UWJ8 174 aa2.81□□□□□ -1.96
VPS13D-206ENST00000476045 WFDC10BQ8IUB3 73 aa2.81□□□□□ -1.96
VPS13D-206ENST00000476045 COX7B2Q8TF08 81 aa2.81□□□□□ -1.96
VPS13D-206ENST00000476045 RMI2Q96E14 147 aa2.81□□□□□ -1.96
VPS13D-206ENST00000476045 CHCHD5Q9BSY4 110 aa2.81□□□□□ -1.96
VPS13D-206ENST00000476045 IGLV4-60A0A075B6I1 120 aa2.8□□□□□ -1.96
VPS13D-206ENST00000476045 A0A087WYN8 130 aa2.8□□□□□ -1.96
VPS13D-206ENST00000476045 COX7A2LO14548 114 aa2.8□□□□□ -1.96
VPS13D-206ENST00000476045 LINC00158P58513 81 aa2.8□□□□□ -1.96
VPS13D-206ENST00000476045 HERV-K104P63124 156 aa2.8□□□□□ -1.96
VPS13D-206ENST00000476045 FAM19A3Q7Z5A8 133 aa2.8□□□□□ -1.96
VPS13D-206ENST00000476045 C5orf38Q86SI9 138 aa2.8□□□□□ -1.96
VPS13D-206ENST00000476045 LINC01600Q96MT4 127 aa2.8□□□□□ -1.96
VPS13D-206ENST00000476045 ANAPC13Q9BS18 74 aa2.8□□□□□ -1.96
VPS13D-206ENST00000476045 IBA57-AS1B1ANH7 110 aa2.79□□□□□ -1.96
VPS13D-206ENST00000476045 BAALC-AS2P0C853 105 aa2.79□□□□□ -1.96
VPS13D-206ENST00000476045 PFN2P35080 140 aa2.79□□□□□ -1.96
VPS13D-206ENST00000476045 C14orf177Q52M58 125 aa2.79□□□□□ -1.96
VPS13D-206ENST00000476045 Q5VSD8 79 aa2.79□□□□□ -1.96
VPS13D-206ENST00000476045 CLPSL2Q6UWE3 100 aa2.79□□□□□ -1.96
VPS13D-206ENST00000476045 MIR7-3HGQ8N6C7 128 aa2.79□□□□□ -1.96
VPS13D-206ENST00000476045 COPS9Q8WXC6 57 aa2.79□□□□□ -1.96
VPS13D-206ENST00000476045 FAM218AQ96MZ4 157 aa2.79□□□□□ -1.96
VPS13D-206ENST00000476045 Q9HAA7 133 aa2.79□□□□□ -1.96
VPS13D-206ENST00000476045 CSDC2Q9Y534 153 aaKnown RBP2.79□□□□□ -1.96
VPS13D-206ENST00000476045 DNAH8Q96JB1 4490 aa2.78□□□□□ -1.96
VPS13D-206ENST00000476045 TRBV6-8A0A0A6YYG3 113 aa2.78□□□□□ -1.96
VPS13D-206ENST00000476045 TRAV13-2A0A0B4J235 113 aa2.78□□□□□ -1.96
VPS13D-206ENST00000476045 CRPP02741 224 aa2.78□□□□□ -1.96
VPS13D-206ENST00000476045 XCL1P47992 114 aa2.78□□□□□ -1.96
VPS13D-206ENST00000476045 NDUFV3P56181 108 aaKnown RBP2.78□□□□□ -1.96
VPS13D-206ENST00000476045 Q8N814 137 aa2.78□□□□□ -1.96
VPS13D-206ENST00000476045 OR13C6PQ8NH95 151 aa2.78□□□□□ -1.96
VPS13D-206ENST00000476045 SND1-IT1Q9HBX3 110 aa2.78□□□□□ -1.96
VPS13D-206ENST00000476045 IGKV2-28A0A075B6P5 120 aa2.77□□□□□ -1.97
VPS13D-206ENST00000476045 LINC00959A0A1B0GUT2 108 aa2.77□□□□□ -1.97
VPS13D-206ENST00000476045 LRCOL1A6NCL2 159 aa2.77□□□□□ -1.97
VPS13D-206ENST00000476045 CCDC179H3BU77 68 aa2.77□□□□□ -1.97
VPS13D-206ENST00000476045 IGKV2D-28P01615 120 aa2.77□□□□□ -1.97
VPS13D-206ENST00000476045 TRACP01848 142 aa2.77□□□□□ -1.97
VPS13D-206ENST00000476045 INAFM2P0DMQ5 153 aa2.77□□□□□ -1.97
VPS13D-206ENST00000476045 SS18Q15532 418 aa2.77□□□□□ -1.97
VPS13D-206ENST00000476045 Q6ZSA8 131 aa2.77□□□□□ -1.97
VPS13D-206ENST00000476045 LINC00337Q8N6G1 96 aa2.77□□□□□ -1.97
VPS13D-206ENST00000476045 SMIM11BQ8TCY0 68 aa2.77□□□□□ -1.97
VPS13D-206ENST00000476045 SS18L2Q9UHA2 77 aa2.77□□□□□ -1.97
VPS13D-206ENST00000476045 A0A087WZ39 114 aa2.76□□□□□ -1.97
VPS13D-206ENST00000476045 IGHV3OR16-9A0A0B4J2B5 98 aa2.76□□□□□ -1.97
VPS13D-206ENST00000476045 RPL28P46779 137 aaKnown RBP2.76□□□□□ -1.97
VPS13D-206ENST00000476045 KRTAP10-1P60331 282 aa2.76□□□□□ -1.97
VPS13D-206ENST00000476045 C6orf226Q5I0X4 101 aa2.76□□□□□ -1.97
VPS13D-206ENST00000476045 Q6Q795 121 aa2.76□□□□□ -1.97
VPS13D-206ENST00000476045 C22orf24Q9Y442 160 aa2.76□□□□□ -1.97
VPS13D-206ENST00000476045 IGLV10-54A0A075B6I4 117 aa2.75□□□□□ -1.97
VPS13D-206ENST00000476045 FAM240AA0A1B0GVK7 77 aa2.75□□□□□ -1.97
VPS13D-206ENST00000476045 LECT2O14960 151 aa2.75□□□□□ -1.97
VPS13D-206ENST00000476045 PRR3P79522 188 aaKnown RBP2.75□□□□□ -1.97
VPS13D-206ENST00000476045 SMCR5Q8TEV8 140 aa2.75□□□□□ -1.97
VPS13D-206ENST00000476045 PKHD1L1Q86WI1 4243 aa2.75□□□□□ -1.97
VPS13D-206ENST00000476045 IGKV2D-24A0A075B6R9 120 aa2.74□□□□□ -1.97
VPS13D-206ENST00000476045 FAM236AA0A1B0GUQ0 79 aa2.74□□□□□ -1.97
VPS13D-206ENST00000476045 FAM236BA0A1B0GV22 79 aa2.74□□□□□ -1.97
VPS13D-206ENST00000476045 H0YGX0 51 aa2.74□□□□□ -1.97
VPS13D-206ENST00000476045 NCR3O14931 201 aa2.74□□□□□ -1.97
VPS13D-206ENST00000476045 DNAL4O96015 105 aa2.74□□□□□ -1.97
VPS13D-206ENST00000476045 ANGP03950 147 aaKnown RBP2.74□□□□□ -1.97
VPS13D-206ENST00000476045 ACYP1P07311 99 aa2.74□□□□□ -1.97
VPS13D-206ENST00000476045 C9orf129Q5T035 196 aaKnown RBP2.74□□□□□ -1.97
VPS13D-206ENST00000476045 LINC00269Q8N2A0 174 aa2.74□□□□□ -1.97
VPS13D-206ENST00000476045 CHCHD10Q8WYQ3 142 aaPredicted RBP2.74□□□□□ -1.97
VPS13D-206ENST00000476045 PPDPFQ9H3Y8 114 aa2.74□□□□□ -1.97
VPS13D-206ENST00000476045 C14orf132Q9NPU4 83 aa2.74□□□□□ -1.97
VPS13D-206ENST00000476045 PKIGQ9Y2B9 76 aa2.74□□□□□ -1.97
VPS13D-206ENST00000476045 IGLV9-49A0A0B4J1Y8 123 aa2.73□□□□□ -1.97
VPS13D-206ENST00000476045 IGKV3D-7A0A0C4DH55 119 aa2.73□□□□□ -1.97
VPS13D-206ENST00000476045 TRBV7-7A0A0K0K1E9 115 aa2.73□□□□□ -1.97
VPS13D-206ENST00000476045 C9orf116Q5BN46 136 aaPredicted RBP2.73□□□□□ -1.97
VPS13D-206ENST00000476045 LINC00643Q86TS7 51 aa2.73□□□□□ -1.97
VPS13D-206ENST00000476045 Q8IZM0 81 aa2.73□□□□□ -1.97
VPS13D-206ENST00000476045 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.72□□□□□ -1.97
VPS13D-206ENST00000476045 REG3AQ06141 175 aa2.72□□□□□ -1.97
VPS13D-206ENST00000476045 SPAG11BQ08648 103 aa2.72□□□□□ -1.97
VPS13D-206ENST00000476045 KIAA0087Q14695 138 aa2.72□□□□□ -1.97
VPS13D-206ENST00000476045 UNQ6190/PRO20217Q6UXQ8 127 aa2.72□□□□□ -1.97
VPS13D-206ENST00000476045 SDIM1Q6ZPB5 146 aa2.72□□□□□ -1.97
VPS13D-206ENST00000476045 SCXQ7RTU7 201 aa2.72□□□□□ -1.97
VPS13D-206ENST00000476045 SMIM29Q86T20 159 aa2.72□□□□□ -1.97
VPS13D-206ENST00000476045 LINC01561Q8N1V8 128 aa2.72□□□□□ -1.97
VPS13D-206ENST00000476045 LINC00526Q96FQ7 95 aa2.72□□□□□ -1.97
VPS13D-206ENST00000476045 PRR34Q9NV39 138 aa2.72□□□□□ -1.97
VPS13D-206ENST00000476045 KLK12Q9UKR0 248 aa2.72□□□□□ -1.97
VPS13D-206ENST00000476045 FAT3Q8TDW7 4589 aa2.72□□□□□ -1.97
VPS13D-206ENST00000476045 HMCN2Q8NDA2 5059 aa2.72□□□□□ -1.97
VPS13D-206ENST00000476045 OXTP01178 125 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms