RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 GTF2H5Q6ZYL4 71 aa4.53□□□□□ -1.68
SHQ1-207ENST00000475558 NKAPP1Q8N9T2 125 aa4.53□□□□□ -1.68
SHQ1-207ENST00000475558 OR13C6PQ8NH95 151 aa4.53□□□□□ -1.68
SHQ1-207ENST00000475558 DPH3Q96FX2 82 aa4.53□□□□□ -1.68
SHQ1-207ENST00000475558 GAGE2DQ9UEU5 116 aa4.53□□□□□ -1.68
SHQ1-207ENST00000475558 FLG2Q5D862 2391 aaPredicted RBP4.53□□□□□ -1.68
SHQ1-207ENST00000475558 FAT1Q14517 4588 aa4.52□□□□□ -1.69
SHQ1-207ENST00000475558 IGLV5-37A0A075B6J1 123 aa4.52□□□□□ -1.69
SHQ1-207ENST00000475558 TRBV7-6A0A0J9YX20 115 aa4.52□□□□□ -1.69
SHQ1-207ENST00000475558 RPL28P46779 137 aaKnown RBP4.52□□□□□ -1.69
SHQ1-207ENST00000475558 NPC2P61916 151 aa4.52□□□□□ -1.69
SHQ1-207ENST00000475558 GAGE2BQ13066 116 aa4.52□□□□□ -1.69
SHQ1-207ENST00000475558 Q1RN00 199 aa4.52□□□□□ -1.69
SHQ1-207ENST00000475558 SOSTDC1Q6X4U4 206 aa4.52□□□□□ -1.69
SHQ1-207ENST00000475558 SDIM1Q6ZPB5 146 aa4.52□□□□□ -1.69
SHQ1-207ENST00000475558 SRRM2Q9UQ35 2752 aaKnown RBP4.51□□□□□ -1.69
SHQ1-207ENST00000475558 IGLV5-52A0A0A0MRZ9 124 aa4.51□□□□□ -1.69
SHQ1-207ENST00000475558 H3BQ85 93 aa4.51□□□□□ -1.69
SHQ1-207ENST00000475558 Q5VSD8 79 aa4.51□□□□□ -1.69
SHQ1-207ENST00000475558 XAGE1AQ9HD64 81 aa4.51□□□□□ -1.69
SHQ1-207ENST00000475558 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.5□□□□□ -1.69
SHQ1-207ENST00000475558 IGKV2-28A0A075B6P5 120 aa4.5□□□□□ -1.69
SHQ1-207ENST00000475558 A0A1B0GX51 115 aa4.5□□□□□ -1.69
SHQ1-207ENST00000475558 A0A1W2PPM0 123 aa4.5□□□□□ -1.69
SHQ1-207ENST00000475558 H3BUT2 72 aa4.5□□□□□ -1.69
SHQ1-207ENST00000475558 IGKV2D-28P01615 120 aa4.5□□□□□ -1.69
SHQ1-207ENST00000475558 IGLV6-57P01721 117 aa4.5□□□□□ -1.69
SHQ1-207ENST00000475558 VPREB1P12018 145 aa4.5□□□□□ -1.69
SHQ1-207ENST00000475558 XGP55808 180 aa4.5□□□□□ -1.69
SHQ1-207ENST00000475558 KRTAP9-8Q9BYQ0 159 aa4.5□□□□□ -1.69
SHQ1-207ENST00000475558 MYCBP2O75592 4640 aa4.5□□□□□ -1.69
SHQ1-207ENST00000475558 RPL13AP40429 203 aaKnown RBP4.49□□□□□ -1.69
SHQ1-207ENST00000475558 WFDC2Q14508 124 aa4.49□□□□□ -1.69
SHQ1-207ENST00000475558 C9orf129Q5T035 196 aaKnown RBP4.49□□□□□ -1.69
SHQ1-207ENST00000475558 H7C2G1 150 aa4.48□□□□□ -1.69
SHQ1-207ENST00000475558 SLC25A20O43772 301 aa4.48□□□□□ -1.69
SHQ1-207ENST00000475558 TSPAN13O95857 204 aa4.48□□□□□ -1.69
SHQ1-207ENST00000475558 ATXN8Q156A1 80 aa4.48□□□□□ -1.69
SHQ1-207ENST00000475558 MRPL55Q7Z7F7 128 aaKnown RBP4.48□□□□□ -1.69
SHQ1-207ENST00000475558 LINC00337Q8N6G1 96 aa4.48□□□□□ -1.69
SHQ1-207ENST00000475558 KCNQ1DNQ9H478 68 aa4.48□□□□□ -1.69
SHQ1-207ENST00000475558 C22orf24Q9Y442 160 aa4.48□□□□□ -1.69
SHQ1-207ENST00000475558 K7ERJ3 54 aa4.47□□□□□ -1.69
SHQ1-207ENST00000475558 SMIM11BQ8TCY0 68 aa4.47□□□□□ -1.69
SHQ1-207ENST00000475558 SPCS1Q9Y6A9 102 aa4.47□□□□□ -1.69
SHQ1-207ENST00000475558 IGLV1-50A0A075B6I6 118 aa4.46□□□□□ -1.7
SHQ1-207ENST00000475558 TRAV23DV6A0A075B6W5 121 aa4.46□□□□□ -1.7
SHQ1-207ENST00000475558 A0A096LNI7 61 aa4.46□□□□□ -1.7
SHQ1-207ENST00000475558 F8W1H4 67 aa4.46□□□□□ -1.7
SHQ1-207ENST00000475558 PRYO14603 147 aa4.46□□□□□ -1.7
SHQ1-207ENST00000475558 TRACP01848 142 aa4.46□□□□□ -1.7
SHQ1-207ENST00000475558 SMR3BP02814 79 aaPredicted RBP4.46□□□□□ -1.7
SHQ1-207ENST00000475558 PRR3P79522 188 aaKnown RBP4.46□□□□□ -1.7
SHQ1-207ENST00000475558 UBE2V1Q13404 147 aa4.46□□□□□ -1.7
SHQ1-207ENST00000475558 OCIAD2Q56VL3 154 aa4.46□□□□□ -1.7
SHQ1-207ENST00000475558 DIRC1Q969H9 104 aa4.46□□□□□ -1.7
SHQ1-207ENST00000475558 IGKV2-24A0A0C4DH68 120 aa4.45□□□□□ -1.7
SHQ1-207ENST00000475558 TRBV10-3A0A0K0K1G6 114 aa4.45□□□□□ -1.7
SHQ1-207ENST00000475558 K7EP34 96 aa4.45□□□□□ -1.7
SHQ1-207ENST00000475558 NCR3O14931 201 aa4.45□□□□□ -1.7
SHQ1-207ENST00000475558 TRIAP1O43715 76 aa4.45□□□□□ -1.7
SHQ1-207ENST00000475558 ZNF73O43830 326 aaPredicted RBP4.45□□□□□ -1.7
SHQ1-207ENST00000475558 FUSP35637 526 aaKnown RBP eCLIP4.45□□□□□ -1.7
SHQ1-207ENST00000475558 KRTAP10-1P60331 282 aa4.45□□□□□ -1.7
SHQ1-207ENST00000475558 C7orf33Q8WU49 177 aa4.45□□□□□ -1.7
SHQ1-207ENST00000475558 LINC00167Q96N53 147 aa4.45□□□□□ -1.7
SHQ1-207ENST00000475558 DNAL4O96015 105 aa4.44□□□□□ -1.7
SHQ1-207ENST00000475558 COX7BP24311 80 aa4.44□□□□□ -1.7
SHQ1-207ENST00000475558 SERTAD4-AS1Q5TG53 156 aa4.44□□□□□ -1.7
SHQ1-207ENST00000475558 SPACA4Q8TDM5 124 aa4.44□□□□□ -1.7
SHQ1-207ENST00000475558 PLAC8Q9NZF1 115 aa4.44□□□□□ -1.7
SHQ1-207ENST00000475558 DHRS4-AS1Q9P1J3 65 aa4.44□□□□□ -1.7
SHQ1-207ENST00000475558 UBR4Q5T4S7 5183 aa4.44□□□□□ -1.7
SHQ1-207ENST00000475558 A0A1B0GV90 55 aa4.43□□□□□ -1.7
SHQ1-207ENST00000475558 ETDCA0A1B0GVM5 59 aa4.43□□□□□ -1.7
SHQ1-207ENST00000475558 A0A1W2PNN7 141 aa4.43□□□□□ -1.7
SHQ1-207ENST00000475558 hADV29S1A0JD25 119 aa4.43□□□□□ -1.7
SHQ1-207ENST00000475558 H0Y9J4 135 aa4.43□□□□□ -1.7
SHQ1-207ENST00000475558 M0QXV9 152 aa4.43□□□□□ -1.7
SHQ1-207ENST00000475558 LST1O00453 97 aa4.43□□□□□ -1.7
SHQ1-207ENST00000475558 UBE2BP63146 152 aa4.43□□□□□ -1.7
SHQ1-207ENST00000475558 C6orf99Q4VX62 202 aa4.43□□□□□ -1.7
SHQ1-207ENST00000475558 REG3GQ6UW15 175 aa4.43□□□□□ -1.7
SHQ1-207ENST00000475558 A0A087WYN8 130 aa4.42□□□□□ -1.7
SHQ1-207ENST00000475558 KRTAP29-1A8MX34 341 aaPredicted RBP4.42□□□□□ -1.7
SHQ1-207ENST00000475558 TMEM256-PLSCR3K7ERE1 68 aa4.42□□□□□ -1.7
SHQ1-207ENST00000475558 SPRR1AP35321 89 aa4.42□□□□□ -1.7
SHQ1-207ENST00000475558 PCP4P48539 62 aa4.42□□□□□ -1.7
SHQ1-207ENST00000475558 ELOF1P60002 83 aaKnown RBP4.42□□□□□ -1.7
SHQ1-207ENST00000475558 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.42□□□□□ -1.7
SHQ1-207ENST00000475558 LINC00575Q6W349 94 aa4.42□□□□□ -1.7
SHQ1-207ENST00000475558 FAM19A5Q7Z5A7 132 aaPredicted RBP4.42□□□□□ -1.7
SHQ1-207ENST00000475558 PPDPFLQ8WWR9 84 aa4.42□□□□□ -1.7
SHQ1-207ENST00000475558 LINC01600Q96MT4 127 aa4.42□□□□□ -1.7
SHQ1-207ENST00000475558 H3BT86 120 aa4.41□□□□□ -1.7
SHQ1-207ENST00000475558 TCL1BO95988 128 aa4.41□□□□□ -1.7
SHQ1-207ENST00000475558 PLA2G1BP04054 148 aaKnown RBP4.41□□□□□ -1.7
SHQ1-207ENST00000475558 Q8NDZ9 215 aa4.41□□□□□ -1.7
SHQ1-207ENST00000475558 HMCN2Q8NDA2 5059 aa4.41□□□□□ -1.7
SHQ1-207ENST00000475558 FAM168BA1KXE4 195 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms