RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 PRB1P04280 392 aa2□□□□□ -2.09
SDHB-205ENST00000475506 PRB3Q04118 309 aaPredicted RBP2□□□□□ -2.09
SDHB-205ENST00000475506 DEFB119Q8N690 84 aa2□□□□□ -2.09
SDHB-205ENST00000475506 LINC01558Q9Y6Z2 57 aa2□□□□□ -2.09
SDHB-205ENST00000475506 SPAG11AQ6PDA7 123 aa1.99□□□□□ -2.09
SDHB-205ENST00000475506 Q6ZQY7 126 aa1.99□□□□□ -2.09
SDHB-205ENST00000475506 Q8IZM0 81 aa1.99□□□□□ -2.09
SDHB-205ENST00000475506 RHPN1-AS1Q9BWJ2 59 aa1.99□□□□□ -2.09
SDHB-205ENST00000475506 ASCC3Q8N3C0 2202 aaKnown RBP1.99□□□□□ -2.09
SDHB-205ENST00000475506 PDE4DIPQ5VU43 2346 aa1.99□□□□□ -2.09
SDHB-205ENST00000475506 IGKV3-7A0A075B6H7 116 aa1.98□□□□□ -2.09
SDHB-205ENST00000475506 DEFB112Q30KQ8 113 aa1.98□□□□□ -2.09
SDHB-205ENST00000475506 KCNQ1DNQ9H478 68 aa1.98□□□□□ -2.09
SDHB-205ENST00000475506 NAV3Q8IVL0 2385 aa1.98□□□□□ -2.09
SDHB-205ENST00000475506 MUC4Q99102 2169 aa1.98□□□□□ -2.09
SDHB-205ENST00000475506 H0Y9P7 68 aa1.97□□□□□ -2.09
SDHB-205ENST00000475506 HTN1P15515 57 aa1.97□□□□□ -2.09
SDHB-205ENST00000475506 SPINK13Q1W4C9 94 aa1.97□□□□□ -2.09
SDHB-205ENST00000475506 CNTRLQ7Z7A1 2325 aa1.96□□□□□ -2.1
SDHB-205ENST00000475506 A0A096LNT2 108 aa1.96□□□□□ -2.1
SDHB-205ENST00000475506 IGKV3OR2-268A0A0C4DH90 116 aa1.96□□□□□ -2.1
SDHB-205ENST00000475506 F5P12259 2224 aa1.96□□□□□ -2.1
SDHB-205ENST00000475506 A0A087WSZ3 146 aa1.95□□□□□ -2.1
SDHB-205ENST00000475506 M0R2N4 97 aa1.95□□□□□ -2.1
SDHB-205ENST00000475506 KRTAP26-1Q6PEX3 210 aa1.95□□□□□ -2.1
SDHB-205ENST00000475506 LINC00959A0A1B0GUT2 108 aa1.94□□□□□ -2.1
SDHB-205ENST00000475506 G3V318 75 aa1.94□□□□□ -2.1
SDHB-205ENST00000475506 DEFB1P60022 68 aa1.94□□□□□ -2.1
SDHB-205ENST00000475506 C4orf3Q8WVX3 66 aa1.94□□□□□ -2.1
SDHB-205ENST00000475506 RP1L1Q8IWN7 2480 aaPredicted RBP1.93□□□□□ -2.1
SDHB-205ENST00000475506 DNAJC13O75165 2243 aa1.93□□□□□ -2.1
SDHB-205ENST00000475506 CADP27708 2225 aa1.93□□□□□ -2.1
SDHB-205ENST00000475506 TRGV1A0A0A0MS02 117 aa1.93□□□□□ -2.1
SDHB-205ENST00000475506 C5orf56Q8N8D9 126 aa1.93□□□□□ -2.1
SDHB-205ENST00000475506 TP53AIP1Q9HCN2 124 aa1.93□□□□□ -2.1
SDHB-205ENST00000475506 PLAC8Q9NZF1 115 aa1.93□□□□□ -2.1
SDHB-205ENST00000475506 U3KQA8 63 aa1.93□□□□□ -2.1
SDHB-205ENST00000475506 IGLV5-48A0A075B6I7 105 aa1.92□□□□□ -2.1
SDHB-205ENST00000475506 A8MTW9 85 aa1.92□□□□□ -2.1
SDHB-205ENST00000475506 UQCR11O14957 56 aa1.92□□□□□ -2.1
SDHB-205ENST00000475506 SPINK7P58062 85 aa1.92□□□□□ -2.1
SDHB-205ENST00000475506 KRTAP5-7Q6L8G8 165 aa1.92□□□□□ -2.1
SDHB-205ENST00000475506 KIAA0100Q14667 2235 aaKnown RBP1.92□□□□□ -2.1
SDHB-205ENST00000475506 CACNA1BQ00975 2339 aa1.91□□□□□ -2.1
SDHB-205ENST00000475506 DEFB131BA0A096LNP1 70 aa1.91□□□□□ -2.1
SDHB-205ENST00000475506 K7EQZ3 153 aa1.91□□□□□ -2.1
SDHB-205ENST00000475506 DEFB131AP59861 70 aa1.91□□□□□ -2.1
SDHB-205ENST00000475506 CSAG1Q6PB30 78 aa1.91□□□□□ -2.1
SDHB-205ENST00000475506 SPATA8Q6RVD6 105 aa1.91□□□□□ -2.1
SDHB-205ENST00000475506 WFDC10BQ8IUB3 73 aa1.91□□□□□ -2.1
SDHB-205ENST00000475506 WFDC13Q8IUB5 93 aa1.91□□□□□ -2.1
SDHB-205ENST00000475506 DEFB105AQ8NG35 78 aa1.91□□□□□ -2.1
SDHB-205ENST00000475506 SPRR4Q96PI1 79 aa1.91□□□□□ -2.1
SDHB-205ENST00000475506 MUC6Q6W4X9 2439 aa1.9□□□□□ -2.1
SDHB-205ENST00000475506 GVQW2A0A096LPI5 108 aaPredicted RBP1.9□□□□□ -2.11
SDHB-205ENST00000475506 A0A1B0GU69 56 aa1.9□□□□□ -2.11
SDHB-205ENST00000475506 ACYP2P14621 99 aa1.9□□□□□ -2.11
SDHB-205ENST00000475506 MIR22HGQ0VDD5 57 aa1.9□□□□□ -2.11
SDHB-205ENST00000475506 URB1O60287 2271 aaKnown RBP1.89□□□□□ -2.11
SDHB-205ENST00000475506 ABCA1O95477 2261 aa1.89□□□□□ -2.11
SDHB-205ENST00000475506 LYNX1G3V0Z9 82 aa1.89□□□□□ -2.11
SDHB-205ENST00000475506 LYNX1P0DP58 116 aa1.89□□□□□ -2.11
SDHB-205ENST00000475506 TECTAO75443 2155 aa1.89□□□□□ -2.11
SDHB-205ENST00000475506 PTPRQQ9UMZ3 2332 aa1.89□□□□□ -2.11
SDHB-205ENST00000475506 ASXL3Q9C0F0 2248 aa1.89□□□□□ -2.11
SDHB-205ENST00000475506 A0A0C4DFX4 3053 aa1.88□□□□□ -2.11
SDHB-205ENST00000475506 ANGP03950 147 aaKnown RBP1.88□□□□□ -2.11
SDHB-205ENST00000475506 Q6ZSA8 131 aa1.88□□□□□ -2.11
SDHB-205ENST00000475506 NOP10Q9NPE3 64 aaKnown RBP1.88□□□□□ -2.11
SDHB-205ENST00000475506 H3BUX3 64 aa1.87□□□□□ -2.11
SDHB-205ENST00000475506 INE1O15225 51 aa1.87□□□□□ -2.11
SDHB-205ENST00000475506 DMAC1Q96GE9 116 aa1.87□□□□□ -2.11
SDHB-205ENST00000475506 COL6A6A6NMZ7 2263 aa1.87□□□□□ -2.11
SDHB-205ENST00000475506 DEFB109BQ30KR1 87 aa1.85□□□□□ -2.11
SDHB-205ENST00000475506 CLPSL2Q6UWE3 100 aa1.85□□□□□ -2.11
SDHB-205ENST00000475506 C6orf48Q9UBA6 75 aa1.85□□□□□ -2.11
SDHB-205ENST00000475506 PRO0255Q9UI72 69 aa1.85□□□□□ -2.11
SDHB-205ENST00000475506 KNL1Q8NG31 2342 aa1.85□□□□□ -2.11
SDHB-205ENST00000475506 ABCA4P78363 2273 aa1.84□□□□□ -2.11
SDHB-205ENST00000475506 PLCE1Q9P212 2302 aa1.84□□□□□ -2.11
SDHB-205ENST00000475506 HELZ2Q9BYK8 2649 aaKnown RBP1.84□□□□□ -2.11
SDHB-205ENST00000475506 Q6ZRX8 168 aa1.84□□□□□ -2.11
SDHB-205ENST00000475506 MED13LQ71F56 2210 aa1.84□□□□□ -2.11
SDHB-205ENST00000475506 WNK2Q9Y3S1 2297 aa1.84□□□□□ -2.12
SDHB-205ENST00000475506 DEFB132Q7Z7B7 95 aa1.83□□□□□ -2.12
SDHB-205ENST00000475506 PRO3102Q9H379 93 aa1.83□□□□□ -2.12
SDHB-205ENST00000475506 NUPR2A6NF83 97 aa1.82□□□□□ -2.12
SDHB-205ENST00000475506 LELP1Q5T871 98 aa1.82□□□□□ -2.12
SDHB-205ENST00000475506 WDR87Q6ZQQ6 2873 aa1.82□□□□□ -2.12
SDHB-205ENST00000475506 MMP24-AS1A0A0U1RRL7 71 aa1.81□□□□□ -2.12
SDHB-205ENST00000475506 DEFB130BP0DP73 79 aa1.81□□□□□ -2.12
SDHB-205ENST00000475506 DEFB130AP0DP74 79 aa1.81□□□□□ -2.12
SDHB-205ENST00000475506 RPL37AP61513 92 aaKnown RBP1.81□□□□□ -2.12
SDHB-205ENST00000475506 KRTAP21-3Q3LHN1 58 aa1.81□□□□□ -2.12
SDHB-205ENST00000475506 OTOGLQ3ZCN5 2332 aa1.81□□□□□ -2.12
SDHB-205ENST00000475506 DOPEY2Q9Y3R5 2298 aa1.8□□□□□ -2.12
SDHB-205ENST00000475506 FLG2Q5D862 2391 aaPredicted RBP1.8□□□□□ -2.12
SDHB-205ENST00000475506 SPRR1AP35321 89 aa1.8□□□□□ -2.12
SDHB-205ENST00000475506 MRPL34Q9BQ48 92 aaKnown RBP1.8□□□□□ -2.12
SDHB-205ENST00000475506 LINC00472Q9H8W2 130 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms