RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 R4GN34 69 aa1.99□□□□□ -2.09
UBR3-208ENST00000474426 CNOT1A5YKK6 2376 aaKnown RBP1.99□□□□□ -2.09
UBR3-208ENST00000474426 ZZEF1O43149 2961 aa1.99□□□□□ -2.09
UBR3-208ENST00000474426 SPACA4Q8TDM5 124 aa1.99□□□□□ -2.09
UBR3-208ENST00000474426 AKAP13Q12802 2813 aa1.98□□□□□ -2.09
UBR3-208ENST00000474426 H3BRN7 92 aa1.98□□□□□ -2.09
UBR3-208ENST00000474426 PKD1L2Q7Z442 2459 aa1.98□□□□□ -2.09
UBR3-208ENST00000474426 DEFB131BA0A096LNP1 70 aa1.98□□□□□ -2.09
UBR3-208ENST00000474426 Q8IZM0 81 aa1.98□□□□□ -2.09
UBR3-208ENST00000474426 CRIPTQ9P021 101 aa1.98□□□□□ -2.09
UBR3-208ENST00000474426 DMXL1Q9Y485 3027 aa1.98□□□□□ -2.09
UBR3-208ENST00000474426 KRTAP10-8P60410 259 aa1.98□□□□□ -2.09
UBR3-208ENST00000474426 TPRXLQ17RH7 258 aa1.98□□□□□ -2.09
UBR3-208ENST00000474426 CCL19Q99731 98 aa1.98□□□□□ -2.09
UBR3-208ENST00000474426 KRTAP9-9Q9BYP9 154 aa1.98□□□□□ -2.09
UBR3-208ENST00000474426 KRTAP9-4Q9BYQ2 154 aa1.98□□□□□ -2.09
UBR3-208ENST00000474426 CHD9Q3L8U1 2897 aa1.97□□□□□ -2.09
UBR3-208ENST00000474426 K7EQZ3 153 aa1.97□□□□□ -2.09
UBR3-208ENST00000474426 COX6A2Q02221 97 aa1.97□□□□□ -2.09
UBR3-208ENST00000474426 DMXL2Q8TDJ6 3036 aa1.97□□□□□ -2.09
UBR3-208ENST00000474426 IGLV6-57P01721 117 aa1.97□□□□□ -2.09
UBR3-208ENST00000474426 A0A0G2JQZ4 141 aa1.97□□□□□ -2.09
UBR3-208ENST00000474426 KRTAP29-1A8MX34 341 aaPredicted RBP1.97□□□□□ -2.09
UBR3-208ENST00000474426 FLG2Q5D862 2391 aaPredicted RBP1.97□□□□□ -2.09
UBR3-208ENST00000474426 RPL37AP61513 92 aaKnown RBP1.96□□□□□ -2.09
UBR3-208ENST00000474426 CSMD3Q7Z407 3707 aa1.96□□□□□ -2.1
UBR3-208ENST00000474426 UBR5O95071 2799 aaPredicted RBP1.96□□□□□ -2.1
UBR3-208ENST00000474426 FN1P02751 2386 aaKnown RBP1.96□□□□□ -2.1
UBR3-208ENST00000474426 WT1-ASQ06250 92 aa1.96□□□□□ -2.1
UBR3-208ENST00000474426 SSBP3-AS1Q7Z2R9 100 aa1.96□□□□□ -2.1
UBR3-208ENST00000474426 SRRM2Q9UQ35 2752 aaKnown RBP1.96□□□□□ -2.1
UBR3-208ENST00000474426 A0A1B0GUV1 79 aa1.96□□□□□ -2.1
UBR3-208ENST00000474426 STATHP02808 62 aa1.95□□□□□ -2.1
UBR3-208ENST00000474426 LORP23490 312 aaPredicted RBP1.95□□□□□ -2.1
UBR3-208ENST00000474426 RPL39P5Q59GN2 51 aa1.95□□□□□ -2.1
UBR3-208ENST00000474426 KRTAP1-3Q8IUG1 177 aa1.95□□□□□ -2.1
UBR3-208ENST00000474426 ADGRG4Q8IZF6 3080 aa1.95□□□□□ -2.1
UBR3-208ENST00000474426 COX17Q14061 63 aa1.95□□□□□ -2.1
UBR3-208ENST00000474426 KRTAP3-1Q9BYR8 98 aa1.95□□□□□ -2.1
UBR3-208ENST00000474426 M0QY20 66 aa1.95□□□□□ -2.1
UBR3-208ENST00000474426 CACNA1AO00555 2505 aa1.94□□□□□ -2.1
UBR3-208ENST00000474426 NF1P21359 2839 aa1.94□□□□□ -2.1
UBR3-208ENST00000474426 G3V318 75 aa1.94□□□□□ -2.1
UBR3-208ENST00000474426 CCL26Q9Y258 94 aa1.94□□□□□ -2.1
UBR3-208ENST00000474426 CSMD2Q7Z408 3487 aa1.94□□□□□ -2.1
UBR3-208ENST00000474426 DEFB108AA8MXU0 73 aa1.94□□□□□ -2.1
UBR3-208ENST00000474426 PSORS1C2Q9UIG4 136 aa1.94□□□□□ -2.1
UBR3-208ENST00000474426 CSMD1Q96PZ7 3565 aa1.93□□□□□ -2.1
UBR3-208ENST00000474426 ACYP2P14621 99 aa1.93□□□□□ -2.1
UBR3-208ENST00000474426 DEFB123Q8N688 67 aa1.93□□□□□ -2.1
UBR3-208ENST00000474426 BSNQ9UPA5 3926 aa1.93□□□□□ -2.1
UBR3-208ENST00000474426 KRTAP4-9Q9BYQ8 210 aa1.93□□□□□ -2.1
UBR3-208ENST00000474426 KRTAP4-2Q9BYR5 136 aa1.93□□□□□ -2.1
UBR3-208ENST00000474426 PTPRZ1P23471 2315 aaPredicted RBP1.93□□□□□ -2.1
UBR3-208ENST00000474426 PRR9Q5T870 116 aa1.93□□□□□ -2.1
UBR3-208ENST00000474426 PCOTHQ58A44 107 aa1.92□□□□□ -2.1
UBR3-208ENST00000474426 JMJD1CQ15652 2540 aa1.92□□□□□ -2.1
UBR3-208ENST00000474426 NAV2Q8IVL1 2488 aa1.92□□□□□ -2.1
UBR3-208ENST00000474426 WDR87Q6ZQQ6 2873 aa1.91□□□□□ -2.1
UBR3-208ENST00000474426 A8MTW9 85 aa1.91□□□□□ -2.1
UBR3-208ENST00000474426 CACNA1EQ15878 2313 aa1.91□□□□□ -2.1
UBR3-208ENST00000474426 MRPL33O75394 65 aaKnown RBP1.91□□□□□ -2.1
UBR3-208ENST00000474426 LY6G6CO95867 125 aa1.91□□□□□ -2.1
UBR3-208ENST00000474426 WFDC13Q8IUB5 93 aa1.91□□□□□ -2.1
UBR3-208ENST00000474426 GVINP1Q7Z2Y8 2422 aa1.9□□□□□ -2.1
UBR3-208ENST00000474426 IGLV5-48A0A075B6I7 105 aa1.9□□□□□ -2.1
UBR3-208ENST00000474426 IGKV2-24A0A0C4DH68 120 aa1.9□□□□□ -2.1
UBR3-208ENST00000474426 TMEM167AQ8TBQ9 72 aa1.9□□□□□ -2.1
UBR3-208ENST00000474426 TACC2O95359 2948 aa1.9□□□□□ -2.11
UBR3-208ENST00000474426 H0YAA0 97 aa1.9□□□□□ -2.11
UBR3-208ENST00000474426 ANGP03950 147 aaKnown RBP1.9□□□□□ -2.11
UBR3-208ENST00000474426 EYSQ5T1H1 3165 aa1.9□□□□□ -2.11
UBR3-208ENST00000474426 LRBAP50851 2863 aa1.9□□□□□ -2.11
UBR3-208ENST00000474426 CUBNO60494 3623 aa1.9□□□□□ -2.11
UBR3-208ENST00000474426 C14orf177Q52M58 125 aa1.9□□□□□ -2.11
UBR3-208ENST00000474426 C10orf55Q5SWW7 151 aa1.9□□□□□ -2.11
UBR3-208ENST00000474426 CACNA1BQ00975 2339 aa1.9□□□□□ -2.11
UBR3-208ENST00000474426 WFDC10BQ8IUB3 73 aa1.89□□□□□ -2.11
UBR3-208ENST00000474426 CHD6Q8TD26 2715 aa1.89□□□□□ -2.11
UBR3-208ENST00000474426 LYNX1G3V0Z9 82 aa1.89□□□□□ -2.11
UBR3-208ENST00000474426 DEFB134Q4QY38 66 aa1.89□□□□□ -2.11
UBR3-208ENST00000474426 C4orf3Q8WVX3 66 aa1.89□□□□□ -2.11
UBR3-208ENST00000474426 PDZD2O15018 2839 aa1.88□□□□□ -2.11
UBR3-208ENST00000474426 KRTAP5-3Q6L8H2 238 aa1.88□□□□□ -2.11
UBR3-208ENST00000474426 VWFP04275 2813 aa1.88□□□□□ -2.11
UBR3-208ENST00000474426 KRTAP24-1Q3LI83 254 aa1.88□□□□□ -2.11
UBR3-208ENST00000474426 ANAPC11Q9NYG5 84 aa1.88□□□□□ -2.11
UBR3-208ENST00000474426 SPTY2D1-AS1A0A0U1RR47 76 aa1.87□□□□□ -2.11
UBR3-208ENST00000474426 IGFL1Q6UW32 110 aa1.87□□□□□ -2.11
UBR3-208ENST00000474426 Q6ZRX8 168 aa1.87□□□□□ -2.11
UBR3-208ENST00000474426 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.87□□□□□ -2.11
UBR3-208ENST00000474426 CACNA1GO43497 2377 aa1.87□□□□□ -2.11
UBR3-208ENST00000474426 ZNF292O60281 2723 aa1.87□□□□□ -2.11
UBR3-208ENST00000474426 K7EIM0 57 aa1.86□□□□□ -2.11
UBR3-208ENST00000474426 MINOS1Q5TGZ0 78 aa1.86□□□□□ -2.11
UBR3-208ENST00000474426 C6orf48Q9UBA6 75 aa1.86□□□□□ -2.11
UBR3-208ENST00000474426 GPR179Q6PRD1 2367 aa1.86□□□□□ -2.11
UBR3-208ENST00000474426 NBPF19A0A087WUL8 3843 aa1.86□□□□□ -2.11
UBR3-208ENST00000474426 LY6EQ16553 131 aa1.86□□□□□ -2.11
UBR3-208ENST00000474426 LELP1Q5T871 98 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms