RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 NAA60Q9H7X0 242 aa1.29□□□□□ -2.2
CNOT4-209ENST00000473470 NHP2Q9NX24 153 aaKnown RBP1.29□□□□□ -2.2
CNOT4-209ENST00000473470 C6orf48Q9UBA6 75 aa1.29□□□□□ -2.2
CNOT4-209ENST00000473470 EPDR1Q9UM22 224 aa1.29□□□□□ -2.2
CNOT4-209ENST00000473470 TRBV19A0A075B6N1 114 aa1.28□□□□□ -2.2
CNOT4-209ENST00000473470 A8MWV9 139 aa1.28□□□□□ -2.2
CNOT4-209ENST00000473470 TMEM238C9JI98 176 aa1.28□□□□□ -2.2
CNOT4-209ENST00000473470 BAALC-AS2P0C853 105 aa1.28□□□□□ -2.2
CNOT4-209ENST00000473470 SMIM17P0DL12 118 aa1.28□□□□□ -2.2
CNOT4-209ENST00000473470 SPAG11BQ08648 103 aa1.28□□□□□ -2.2
CNOT4-209ENST00000473470 PDE6HQ13956 83 aa1.28□□□□□ -2.2
CNOT4-209ENST00000473470 LCA10Q71F78 164 aa1.28□□□□□ -2.2
CNOT4-209ENST00000473470 TRAV21A0A0B4J279 112 aa1.27□□□□□ -2.21
CNOT4-209ENST00000473470 C3orf85A0A1B0GTC6 90 aa1.27□□□□□ -2.21
CNOT4-209ENST00000473470 GNG5P63218 68 aa1.27□□□□□ -2.21
CNOT4-209ENST00000473470 C10orf113Q5VZT2 155 aa1.27□□□□□ -2.21
CNOT4-209ENST00000473470 C2orf82Q6UX34 121 aa1.27□□□□□ -2.21
CNOT4-209ENST00000473470 SCN3BQ9NY72 215 aa1.27□□□□□ -2.21
CNOT4-209ENST00000473470 LINC00959A0A1B0GUT2 108 aa1.26□□□□□ -2.21
CNOT4-209ENST00000473470 NMBP08949 121 aa1.26□□□□□ -2.21
CNOT4-209ENST00000473470 PKIAP61925 76 aa1.26□□□□□ -2.21
CNOT4-209ENST00000473470 IQCJQ1A5X6 159 aa1.26□□□□□ -2.21
CNOT4-209ENST00000473470 MIC13Q5XKP0 118 aa1.26□□□□□ -2.21
CNOT4-209ENST00000473470 TMEM91Q6ZNR0 172 aa1.26□□□□□ -2.21
CNOT4-209ENST00000473470 ATP11AUNQ6ZP68 121 aa1.26□□□□□ -2.21
CNOT4-209ENST00000473470 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.26□□□□□ -2.21
CNOT4-209ENST00000473470 AP3S1Q92572 193 aa1.26□□□□□ -2.21
CNOT4-209ENST00000473470 SPRR4Q96PI1 79 aa1.26□□□□□ -2.21
CNOT4-209ENST00000473470 NMES1Q9C002 83 aa1.26□□□□□ -2.21
CNOT4-209ENST00000473470 U3KQ87 197 aa1.26□□□□□ -2.21
CNOT4-209ENST00000473470 CFDP00746 253 aaPredicted RBP1.25□□□□□ -2.21
CNOT4-209ENST00000473470 ARMS2P0C7Q2 107 aa1.25□□□□□ -2.21
CNOT4-209ENST00000473470 VBP1P61758 197 aa1.25□□□□□ -2.21
CNOT4-209ENST00000473470 GOLT1AQ6ZVE7 132 aa1.25□□□□□ -2.21
CNOT4-209ENST00000473470 OR5H6Q8NGV6 325 aa1.25□□□□□ -2.21
CNOT4-209ENST00000473470 HIST1H2BLQ99880 126 aa1.25□□□□□ -2.21
CNOT4-209ENST00000473470 C9orf16Q9BUW7 83 aa1.25□□□□□ -2.21
CNOT4-209ENST00000473470 SNURFQ9Y675 71 aa1.25□□□□□ -2.21
CNOT4-209ENST00000473470 MGPP08493 103 aa1.24□□□□□ -2.21
CNOT4-209ENST00000473470 FGF7P21781 194 aa1.24□□□□□ -2.21
CNOT4-209ENST00000473470 S100GP29377 79 aa1.24□□□□□ -2.21
CNOT4-209ENST00000473470 KRTAP20-2Q3LI61 65 aa1.24□□□□□ -2.21
CNOT4-209ENST00000473470 C9orf153Q5TBE3 101 aa1.24□□□□□ -2.21
CNOT4-209ENST00000473470 LYRM7Q5U5X0 104 aa1.24□□□□□ -2.21
CNOT4-209ENST00000473470 NDUFA1O15239 70 aa1.23□□□□□ -2.21
CNOT4-209ENST00000473470 HMGB3O15347 200 aaKnown RBP1.23□□□□□ -2.21
CNOT4-209ENST00000473470 PFDN1O60925 122 aa1.23□□□□□ -2.21
CNOT4-209ENST00000473470 CST7O76096 145 aa1.23□□□□□ -2.21
CNOT4-209ENST00000473470 TRIQKQ629K1 86 aa1.23□□□□□ -2.21
CNOT4-209ENST00000473470 OR13C6PQ8NH95 151 aa1.23□□□□□ -2.21
CNOT4-209ENST00000473470 BORCS5Q969J3 196 aa1.23□□□□□ -2.21
CNOT4-209ENST00000473470 MGST2Q99735 147 aa1.23□□□□□ -2.21
CNOT4-209ENST00000473470 TRAV13-1A0A0B4J241 112 aa1.22□□□□□ -2.21
CNOT4-209ENST00000473470 TRAV12-1A0A0B4J245 112 aa1.22□□□□□ -2.21
CNOT4-209ENST00000473470 IFITM5A6NNB3 132 aa1.22□□□□□ -2.21
CNOT4-209ENST00000473470 C1orf196B1AJZ1 125 aa1.22□□□□□ -2.21
CNOT4-209ENST00000473470 IFNA1P01562 189 aa1.22□□□□□ -2.21
CNOT4-209ENST00000473470 RAB4BP61018 213 aa1.22□□□□□ -2.21
CNOT4-209ENST00000473470 KRTAP19-8Q3LI54 63 aa1.22□□□□□ -2.21
CNOT4-209ENST00000473470 RNASE10Q5GAN6 216 aaKnown RBP1.22□□□□□ -2.21
CNOT4-209ENST00000473470 CIB3Q96Q77 187 aaPredicted RBP1.22□□□□□ -2.21
CNOT4-209ENST00000473470 PRRT1Q99946 306 aa1.22□□□□□ -2.21
CNOT4-209ENST00000473470 MRPL35Q9NZE8 188 aaKnown RBP1.22□□□□□ -2.21
CNOT4-209ENST00000473470 COPZ2Q9P299 210 aa1.22□□□□□ -2.21
CNOT4-209ENST00000473470 LOC110117498A0A087WWA1 95 aa1.21□□□□□ -2.22
CNOT4-209ENST00000473470 LOC107984156A0A0G2JMH3 177 aa1.21□□□□□ -2.22
CNOT4-209ENST00000473470 A0A1B0GV72 72 aa1.21□□□□□ -2.22
CNOT4-209ENST00000473470 NDUFC2O95298 119 aa1.21□□□□□ -2.22
CNOT4-209ENST00000473470 NBEAP1P0C6P0 100 aa1.21□□□□□ -2.22
CNOT4-209ENST00000473470 SCGB2B2Q4G0G5 96 aa1.21□□□□□ -2.22
CNOT4-209ENST00000473470 S100A7AQ86SG5 101 aa1.21□□□□□ -2.22
CNOT4-209ENST00000473470 ARL17AQ8IVW1 177 aa1.21□□□□□ -2.22
CNOT4-209ENST00000473470 OR10AG1Q8NH19 301 aa1.21□□□□□ -2.22
CNOT4-209ENST00000473470 SFT2D1Q8WV19 159 aa1.21□□□□□ -2.22
CNOT4-209ENST00000473470 BIN3Q9NQY0 253 aa1.21□□□□□ -2.22
CNOT4-209ENST00000473470 EFCAB10A6NFE3 127 aa1.2□□□□□ -2.22
CNOT4-209ENST00000473470 TPT1P13693 172 aaKnown RBP1.2□□□□□ -2.22
CNOT4-209ENST00000473470 FOXA3P55318 350 aaPredicted RBP1.2□□□□□ -2.22
CNOT4-209ENST00000473470 SMCO1Q147U7 214 aa1.2□□□□□ -2.22
CNOT4-209ENST00000473470 AKR1C8PQ5T2L2 129 aa1.2□□□□□ -2.22
CNOT4-209ENST00000473470 SMIM15Q7Z3B0 74 aa1.2□□□□□ -2.22
CNOT4-209ENST00000473470 CROCCP2Q86T23 111 aa1.2□□□□□ -2.22
CNOT4-209ENST00000473470 CCDC32Q9BV29 185 aa1.2□□□□□ -2.22
CNOT4-209ENST00000473470 TMEM126AQ9H061 195 aa1.2□□□□□ -2.22
CNOT4-209ENST00000473470 FAM107BQ9H098 131 aa1.2□□□□□ -2.22
CNOT4-209ENST00000473470 LYRM2Q9NU23 88 aaPredicted RBP1.2□□□□□ -2.22
CNOT4-209ENST00000473470 FAM236AA0A1B0GUQ0 79 aa1.19□□□□□ -2.22
CNOT4-209ENST00000473470 FAM236BA0A1B0GV22 79 aa1.19□□□□□ -2.22
CNOT4-209ENST00000473470 ZNF727A8MUV8 499 aa1.19□□□□□ -2.22
CNOT4-209ENST00000473470 M0R378 163 aa1.19□□□□□ -2.22
CNOT4-209ENST00000473470 ERC2-IT1O76042 136 aa1.19□□□□□ -2.22
CNOT4-209ENST00000473470 G0S2P27469 103 aa1.19□□□□□ -2.22
CNOT4-209ENST00000473470 FAM167A-AS1Q96KT0 104 aa1.19□□□□□ -2.22
CNOT4-209ENST00000473470 TCRBV3S1A0A5B6 114 aa1.18□□□□□ -2.22
CNOT4-209ENST00000473470 C9orf170A2RU37 121 aa1.18□□□□□ -2.22
CNOT4-209ENST00000473470 RPS29P62273 56 aaKnown RBP1.18□□□□□ -2.22
CNOT4-209ENST00000473470 MT1XP80297 61 aa1.18□□□□□ -2.22
CNOT4-209ENST00000473470 SNX29P2Q8IUI4 249 aa1.18□□□□□ -2.22
CNOT4-209ENST00000473470 C14orf132Q9NPU4 83 aa1.18□□□□□ -2.22
CNOT4-209ENST00000473470 PSENENQ9NZ42 101 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms