RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 TSPAN13O95857 204 aa6.67□□□□□ -1.34
SMARCD3-208ENST00000472789 FAM19A5Q7Z5A7 132 aaPredicted RBP6.67□□□□□ -1.34
SMARCD3-208ENST00000472789 C22orf24Q9Y442 160 aa6.67□□□□□ -1.34
SMARCD3-208ENST00000472789 SNCGO76070 127 aa6.66□□□□□ -1.34
SMARCD3-208ENST00000472789 IGLV6-57P01721 117 aa6.66□□□□□ -1.34
SMARCD3-208ENST00000472789 FABP2P12104 132 aa6.66□□□□□ -1.34
SMARCD3-208ENST00000472789 RPL28P46779 137 aaKnown RBP6.66□□□□□ -1.34
SMARCD3-208ENST00000472789 MRPL55Q7Z7F7 128 aaKnown RBP6.66□□□□□ -1.34
SMARCD3-208ENST00000472789 FLG2Q5D862 2391 aaPredicted RBP6.66□□□□□ -1.34
SMARCD3-208ENST00000472789 M0QXV9 152 aa6.65□□□□□ -1.34
SMARCD3-208ENST00000472789 PLA2G1BP04054 148 aaKnown RBP6.65□□□□□ -1.34
SMARCD3-208ENST00000472789 SERTAD4-AS1Q5TG53 156 aa6.65□□□□□ -1.34
SMARCD3-208ENST00000472789 C7orf33Q8WU49 177 aa6.65□□□□□ -1.34
SMARCD3-208ENST00000472789 PLAC8Q9NZF1 115 aa6.65□□□□□ -1.34
SMARCD3-208ENST00000472789 UBR4Q5T4S7 5183 aa6.65□□□□□ -1.35
SMARCD3-208ENST00000472789 TRAV23DV6A0A075B6W5 121 aa6.64□□□□□ -1.35
SMARCD3-208ENST00000472789 TRBV10-3A0A0K0K1G6 114 aa6.64□□□□□ -1.35
SMARCD3-208ENST00000472789 A0A1W2PPM0 123 aa6.64□□□□□ -1.35
SMARCD3-208ENST00000472789 FAM168BA1KXE4 195 aa6.64□□□□□ -1.35
SMARCD3-208ENST00000472789 H0YGX0 51 aa6.64□□□□□ -1.35
SMARCD3-208ENST00000472789 RPL37AP61513 92 aaKnown RBP6.64□□□□□ -1.35
SMARCD3-208ENST00000472789 Q8NDZ9 215 aa6.64□□□□□ -1.35
SMARCD3-208ENST00000472789 SMIM11BQ8TCY0 68 aa6.64□□□□□ -1.35
SMARCD3-208ENST00000472789 TRBV20-1A0A075B6N2 111 aa6.63□□□□□ -1.35
SMARCD3-208ENST00000472789 A0A1W2PNN7 141 aa6.63□□□□□ -1.35
SMARCD3-208ENST00000472789 GTF2H5Q6ZYL4 71 aa6.63□□□□□ -1.35
SMARCD3-208ENST00000472789 LINC00167Q96N53 147 aa6.63□□□□□ -1.35
SMARCD3-208ENST00000472789 HMCN2Q8NDA2 5059 aa6.62□□□□□ -1.35
SMARCD3-208ENST00000472789 IGLV1-50A0A075B6I6 118 aa6.62□□□□□ -1.35
SMARCD3-208ENST00000472789 TRBV7-6A0A0J9YX20 115 aa6.62□□□□□ -1.35
SMARCD3-208ENST00000472789 GAGE10A6NGK3 116 aa6.62□□□□□ -1.35
SMARCD3-208ENST00000472789 PRYO14603 147 aa6.62□□□□□ -1.35
SMARCD3-208ENST00000472789 UBE2BP63146 152 aa6.62□□□□□ -1.35
SMARCD3-208ENST00000472789 DIRC1Q969H9 104 aa6.62□□□□□ -1.35
SMARCD3-208ENST00000472789 TRIAP1O43715 76 aa6.61□□□□□ -1.35
SMARCD3-208ENST00000472789 ZNF73O43830 326 aaPredicted RBP6.61□□□□□ -1.35
SMARCD3-208ENST00000472789 NAA38Q9BRA0 125 aaKnown RBP6.61□□□□□ -1.35
SMARCD3-208ENST00000472789 KCNQ1DNQ9H478 68 aa6.61□□□□□ -1.35
SMARCD3-208ENST00000472789 RPL37AP8A6NKH3 93 aa6.6□□□□□ -1.35
SMARCD3-208ENST00000472789 SLC25A20O43772 301 aa6.6□□□□□ -1.35
SMARCD3-208ENST00000472789 INAFM2P0DMQ5 153 aa6.6□□□□□ -1.35
SMARCD3-208ENST00000472789 C6orf99Q4VX62 202 aa6.6□□□□□ -1.35
SMARCD3-208ENST00000472789 PHF5AQ7RTV0 110 aaKnown RBP6.6□□□□□ -1.35
SMARCD3-208ENST00000472789 SPCS1Q9Y6A9 102 aa6.6□□□□□ -1.35
SMARCD3-208ENST00000472789 DNAH8Q96JB1 4490 aa6.6□□□□□ -1.35
SMARCD3-208ENST00000472789 ATXN8Q156A1 80 aa6.59□□□□□ -1.35
SMARCD3-208ENST00000472789 ETDCA0A1B0GVM5 59 aa6.58□□□□□ -1.36
SMARCD3-208ENST00000472789 A0A1B0GX51 115 aa6.58□□□□□ -1.36
SMARCD3-208ENST00000472789 GHRHP01286 108 aa6.58□□□□□ -1.36
SMARCD3-208ENST00000472789 COX7BP24311 80 aa6.58□□□□□ -1.36
SMARCD3-208ENST00000472789 REG3GQ6UW15 175 aa6.58□□□□□ -1.36
SMARCD3-208ENST00000472789 KRTAP7-1Q8IUC3 87 aa6.58□□□□□ -1.36
SMARCD3-208ENST00000472789 A0A1B0GV90 55 aa6.57□□□□□ -1.36
SMARCD3-208ENST00000472789 DNAL4O96015 105 aa6.57□□□□□ -1.36
SMARCD3-208ENST00000472789 K7EP34 96 aa6.56□□□□□ -1.36
SMARCD3-208ENST00000472789 LRP1Q07954 4544 aaKnown RBP6.55□□□□□ -1.36
SMARCD3-208ENST00000472789 SPRR1AP35321 89 aa6.55□□□□□ -1.36
SMARCD3-208ENST00000472789 ELOF1P60002 83 aaKnown RBP6.55□□□□□ -1.36
SMARCD3-208ENST00000472789 DHRS4-AS1Q9P1J3 65 aa6.55□□□□□ -1.36
SMARCD3-208ENST00000472789 hADV29S1A0JD25 119 aa6.54□□□□□ -1.36
SMARCD3-208ENST00000472789 H3BQ85 93 aa6.54□□□□□ -1.36
SMARCD3-208ENST00000472789 LST1O00453 97 aa6.54□□□□□ -1.36
SMARCD3-208ENST00000472789 TCL1BO95988 128 aa6.54□□□□□ -1.36
SMARCD3-208ENST00000472789 TRACP01848 142 aa6.54□□□□□ -1.36
SMARCD3-208ENST00000472789 KRTAP10-4P60372 401 aaPredicted RBP6.53□□□□□ -1.36
SMARCD3-208ENST00000472789 UBE2V1Q13404 147 aa6.53□□□□□ -1.36
SMARCD3-208ENST00000472789 C1orf137Q5JT78 98 aa6.53□□□□□ -1.36
SMARCD3-208ENST00000472789 LINC00575Q6W349 94 aa6.53□□□□□ -1.36
SMARCD3-208ENST00000472789 FAM19A1Q7Z5A9 133 aa6.53□□□□□ -1.36
SMARCD3-208ENST00000472789 CLEC2BQ92478 149 aa6.53□□□□□ -1.36
SMARCD3-208ENST00000472789 PSORS1C2Q9UIG4 136 aa6.53□□□□□ -1.36
SMARCD3-208ENST00000472789 B5MCH6 92 aa6.52□□□□□ -1.37
SMARCD3-208ENST00000472789 H0Y9J4 135 aa6.52□□□□□ -1.37
SMARCD3-208ENST00000472789 H3BMG7 143 aa6.52□□□□□ -1.37
SMARCD3-208ENST00000472789 UBE2AP49459 152 aa6.52□□□□□ -1.37
SMARCD3-208ENST00000472789 OCIAD2Q56VL3 154 aa6.52□□□□□ -1.37
SMARCD3-208ENST00000472789 Q6ZRX8 168 aa6.52□□□□□ -1.37
SMARCD3-208ENST00000472789 FAT3Q8TDW7 4589 aa6.51□□□□□ -1.37
SMARCD3-208ENST00000472789 F8W1H4 67 aa6.51□□□□□ -1.37
SMARCD3-208ENST00000472789 BCE1O60756 84 aa6.51□□□□□ -1.37
SMARCD3-208ENST00000472789 KRTAP11-1Q8IUC1 163 aa6.51□□□□□ -1.37
SMARCD3-208ENST00000472789 KRTAP4-16G5E9R7 235 aaPredicted RBP6.5□□□□□ -1.37
SMARCD3-208ENST00000472789 C9JAW5 83 aa6.49□□□□□ -1.37
SMARCD3-208ENST00000472789 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.49□□□□□ -1.37
SMARCD3-208ENST00000472789 FAM218AQ96MZ4 157 aa6.49□□□□□ -1.37
SMARCD3-208ENST00000472789 ORMDL1Q9P0S3 153 aa6.49□□□□□ -1.37
SMARCD3-208ENST00000472789 TMEM256-PLSCR3K7ERE1 68 aa6.48□□□□□ -1.37
SMARCD3-208ENST00000472789 H3BT86 120 aa6.47□□□□□ -1.37
SMARCD3-208ENST00000472789 IGLV7-43P04211 117 aa6.46□□□□□ -1.38
SMARCD3-208ENST00000472789 BAALC-AS2P0C853 105 aa6.46□□□□□ -1.38
SMARCD3-208ENST00000472789 PRLHP81277 87 aa6.46□□□□□ -1.38
SMARCD3-208ENST00000472789 SPINK6Q6UWN8 80 aa6.46□□□□□ -1.38
SMARCD3-208ENST00000472789 PPDPFLQ8WWR9 84 aa6.46□□□□□ -1.38
SMARCD3-208ENST00000472789 HIGD2AQ9BW72 106 aa6.46□□□□□ -1.38
SMARCD3-208ENST00000472789 J3QL48 77 aa6.45□□□□□ -1.38
SMARCD3-208ENST00000472789 ZNF861PO60384 105 aa6.45□□□□□ -1.38
SMARCD3-208ENST00000472789 Q6ZQY7 126 aa6.45□□□□□ -1.38
SMARCD3-208ENST00000472789 ANKRD29Q8N6D5 301 aa6.45□□□□□ -1.38
SMARCD3-208ENST00000472789 SMCR5Q8TEV8 140 aa6.44□□□□□ -1.38
SMARCD3-208ENST00000472789 Q9BRP9 147 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms