RNA–Protein interactions for RNA: ENST00000472278.1

LRRTM3-202, Transcript of leucine rich repeat transmembrane neuronal 3, humanhuman

TSL 2

Gene LRRTM3, Length 264 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3-202ENST00000472278 TGP01266 2768 aa-0.36□□□□□ -2.47
LRRTM3-202ENST00000472278 RGPD8O14715 1765 aaPredicted RBP-0.36□□□□□ -2.47
LRRTM3-202ENST00000472278 RGPD5Q99666 1765 aa-0.36□□□□□ -2.47
LRRTM3-202ENST00000472278 NEXMIFQ5QGS0 1516 aa-0.36□□□□□ -2.47
LRRTM3-202ENST00000472278 KRTAP6-2Q3LI66 62 aa-0.36□□□□□ -2.47
LRRTM3-202ENST00000472278 V9GYS6 101 aa-0.36□□□□□ -2.47
LRRTM3-202ENST00000472278 MYO3AQ8NEV4 1616 aa-0.36□□□□□ -2.47
LRRTM3-202ENST00000472278 PTPN23Q9H3S7 1636 aa-0.36□□□□□ -2.47
LRRTM3-202ENST00000472278 SETD2Q9BYW2 2564 aaPredicted RBP-0.36□□□□□ -2.47
LRRTM3-202ENST00000472278 PLIN4Q96Q06 1357 aa-0.36□□□□□ -2.47
LRRTM3-202ENST00000472278 KMT2CQ8NEZ4 4911 aaKnown RBP-0.37□□□□□ -2.47
LRRTM3-202ENST00000472278 NF1P21359 2839 aa-0.37□□□□□ -2.47
LRRTM3-202ENST00000472278 RGPD2P0DJD1 1756 aa-0.37□□□□□ -2.47
LRRTM3-202ENST00000472278 LAMA5O15230 3695 aa-0.37□□□□□ -2.47
LRRTM3-202ENST00000472278 LRRC7Q96NW7 1537 aa-0.37□□□□□ -2.47
LRRTM3-202ENST00000472278 CICQ96RK0 1608 aaPredicted RBP-0.37□□□□□ -2.47
LRRTM3-202ENST00000472278 MYMXA0A1B0GTQ4 84 aa-0.37□□□□□ -2.47
LRRTM3-202ENST00000472278 SNRPFP62306 86 aaKnown RBP-0.37□□□□□ -2.47
LRRTM3-202ENST00000472278 PKD1P98161 4303 aa-0.37□□□□□ -2.47
LRRTM3-202ENST00000472278 ADAMTS12P58397 1594 aa-0.37□□□□□ -2.47
LRRTM3-202ENST00000472278 PREX1Q8TCU6 1659 aa-0.37□□□□□ -2.47
LRRTM3-202ENST00000472278 PVALEFA0A1B0GWK0 134 aa-0.38□□□□□ -2.47
LRRTM3-202ENST00000472278 SPRR2EP22531 72 aa-0.38□□□□□ -2.47
LRRTM3-202ENST00000472278 RABAC1Q9UI14 185 aa-0.38□□□□□ -2.47
LRRTM3-202ENST00000472278 AKAP13Q12802 2813 aa-0.39□□□□□ -2.47
LRRTM3-202ENST00000472278 TRAV21A0A0B4J279 112 aa-0.39□□□□□ -2.47
LRRTM3-202ENST00000472278 K7EP34 96 aa-0.39□□□□□ -2.47
LRRTM3-202ENST00000472278 NDUFB1O75438 58 aa-0.39□□□□□ -2.47
LRRTM3-202ENST00000472278 NDUFA3O95167 84 aa-0.39□□□□□ -2.47
LRRTM3-202ENST00000472278 LINC00643Q86TS7 51 aa-0.39□□□□□ -2.47
LRRTM3-202ENST00000472278 S100A16Q96FQ6 103 aaKnown RBP-0.39□□□□□ -2.47
LRRTM3-202ENST00000472278 PRRC2CQ9Y520 2896 aaKnown RBP-0.39□□□□□ -2.47
LRRTM3-202ENST00000472278 MXRA5Q9NR99 2828 aa-0.4□□□□□ -2.47
LRRTM3-202ENST00000472278 NBASA2RRP1 2371 aa-0.4□□□□□ -2.47
LRRTM3-202ENST00000472278 CEBPZOSA8MTT3 80 aa-0.4□□□□□ -2.47
LRRTM3-202ENST00000472278 ACYP1P07311 99 aa-0.4□□□□□ -2.47
LRRTM3-202ENST00000472278 WFDC9Q8NEX5 89 aa-0.4□□□□□ -2.47
LRRTM3-202ENST00000472278 LYSTQ99698 3801 aa-0.4□□□□□ -2.47
LRRTM3-202ENST00000472278 HERC1Q15751 4861 aa-0.4□□□□□ -2.47
LRRTM3-202ENST00000472278 PDE4DIPQ5VU43 2346 aa-0.4□□□□□ -2.47
LRRTM3-202ENST00000472278 ABCC3O15438 1527 aa-0.4□□□□□ -2.47
LRRTM3-202ENST00000472278 RGPD4Q7Z3J3 1758 aa-0.4□□□□□ -2.47
LRRTM3-202ENST00000472278 RGPD1P0DJD0 1748 aa-0.41□□□□□ -2.47
LRRTM3-202ENST00000472278 PCLOQ9Y6V0 5065 aa-0.41□□□□□ -2.47
LRRTM3-202ENST00000472278 C3orf79P0CE67 100 aa-0.41□□□□□ -2.48
LRRTM3-202ENST00000472278 UBR1Q8IWV7 1749 aa-0.41□□□□□ -2.48
LRRTM3-202ENST00000472278 SPTBN4Q9H254 2564 aa-0.42□□□□□ -2.48
LRRTM3-202ENST00000472278 RGPD3A6NKT7 1758 aaPredicted RBP-0.42□□□□□ -2.48
LRRTM3-202ENST00000472278 FAT1Q14517 4588 aa-0.42□□□□□ -2.48
LRRTM3-202ENST00000472278 FAT3Q8TDW7 4589 aa-0.42□□□□□ -2.48
LRRTM3-202ENST00000472278 NBPF19A0A087WUL8 3843 aa-0.42□□□□□ -2.48
LRRTM3-202ENST00000472278 TNRC18O15417 2968 aaPredicted RBP-0.42□□□□□ -2.48
LRRTM3-202ENST00000472278 HTTP42858 3142 aa-0.42□□□□□ -2.48
LRRTM3-202ENST00000472278 TTC37Q6PGP7 1564 aa-0.42□□□□□ -2.48
LRRTM3-202ENST00000472278 TIAM2Q8IVF5 1701 aa-0.42□□□□□ -2.48
LRRTM3-202ENST00000472278 SONP18583 2426 aaKnown RBP-0.43□□□□□ -2.48
LRRTM3-202ENST00000472278 DNAH6Q9C0G6 4158 aa-0.43□□□□□ -2.48
LRRTM3-202ENST00000472278 SUPT6HQ7KZ85 1726 aaKnown RBP-0.43□□□□□ -2.48
LRRTM3-202ENST00000472278 AKAP9Q99996 3911 aa-0.43□□□□□ -2.48
LRRTM3-202ENST00000472278 KRTAP19-8Q3LI54 63 aa-0.43□□□□□ -2.48
LRRTM3-202ENST00000472278 PRO3102Q9H379 93 aa-0.43□□□□□ -2.48
LRRTM3-202ENST00000472278 HECTD1Q9ULT8 2610 aa-0.43□□□□□ -2.48
LRRTM3-202ENST00000472278 DSTQ03001 7570 aaKnown RBP-0.43□□□□□ -2.48
LRRTM3-202ENST00000472278 URB2Q14146 1524 aaKnown RBP-0.43□□□□□ -2.48
LRRTM3-202ENST00000472278 KANTRA0A1W2PQU2 76 aa-0.44□□□□□ -2.48
LRRTM3-202ENST00000472278 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.44□□□□□ -2.48
LRRTM3-202ENST00000472278 DNAH9Q9NYC9 4486 aa-0.44□□□□□ -2.48
LRRTM3-202ENST00000472278 CREBBPQ92793 2442 aa-0.44□□□□□ -2.48
LRRTM3-202ENST00000472278 SPG11Q96JI7 2443 aa-0.44□□□□□ -2.48
LRRTM3-202ENST00000472278 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.45□□□□□ -2.48
LRRTM3-202ENST00000472278 LTN1O94822 1766 aa-0.45□□□□□ -2.48
LRRTM3-202ENST00000472278 POLR1AO95602 1720 aaPredicted RBP-0.45□□□□□ -2.48
LRRTM3-202ENST00000472278 C4AP0C0L4 1744 aa-0.45□□□□□ -2.48
LRRTM3-202ENST00000472278 C4BP0C0L5 1744 aa-0.45□□□□□ -2.48
LRRTM3-202ENST00000472278 NWD1Q149M9 1564 aa-0.45□□□□□ -2.48
LRRTM3-202ENST00000472278 USP32Q8NFA0 1604 aa-0.46□□□□□ -2.48
LRRTM3-202ENST00000472278 TACC2O95359 2948 aa-0.46□□□□□ -2.48
LRRTM3-202ENST00000472278 NCOA2Q15596 1464 aa-0.46□□□□□ -2.48
LRRTM3-202ENST00000472278 ZZEF1O43149 2961 aa-0.46□□□□□ -2.48
LRRTM3-202ENST00000472278 C9orf92A6NGG3 77 aa-0.46□□□□□ -2.48
LRRTM3-202ENST00000472278 IFI27P40305 119 aaPredicted RBP-0.46□□□□□ -2.48
LRRTM3-202ENST00000472278 LINC00158P58513 81 aa-0.46□□□□□ -2.48
LRRTM3-202ENST00000472278 TMEM131LA2VDJ0 1609 aa-0.46□□□□□ -2.48
LRRTM3-202ENST00000472278 MAP3K4Q9Y6R4 1608 aa-0.46□□□□□ -2.48
LRRTM3-202ENST00000472278 HIVEP1P15822 2718 aa-0.46□□□□□ -2.48
LRRTM3-202ENST00000472278 STARD9Q9P2P6 4700 aa-0.46□□□□□ -2.48
LRRTM3-202ENST00000472278 UACAQ9BZF9 1416 aa-0.47□□□□□ -2.48
LRRTM3-202ENST00000472278 EPG5Q9HCE0 2579 aa-0.47□□□□□ -2.48
LRRTM3-202ENST00000472278 UMAD1C9J7I0 102 aa-0.47□□□□□ -2.48
LRRTM3-202ENST00000472278 MT1AP04731 61 aa-0.47□□□□□ -2.48
LRRTM3-202ENST00000472278 KIF14Q15058 1648 aa-0.47□□□□□ -2.48
LRRTM3-202ENST00000472278 PPLO60437 1756 aa-0.47□□□□□ -2.49
LRRTM3-202ENST00000472278 CCDC88BA6NC98 1476 aa-0.48□□□□□ -2.49
LRRTM3-202ENST00000472278 PLXNC1O60486 1568 aa-0.48□□□□□ -2.49
LRRTM3-202ENST00000472278 NESP48681 1621 aa-0.48□□□□□ -2.49
LRRTM3-202ENST00000472278 LCE6AA0A183 80 aa-0.48□□□□□ -2.49
LRRTM3-202ENST00000472278 H3BNG1 76 aa-0.48□□□□□ -2.49
LRRTM3-202ENST00000472278 HMGA1P17096 107 aaKnown RBP-0.48□□□□□ -2.49
LRRTM3-202ENST00000472278 CUBNO60494 3623 aa-0.48□□□□□ -2.49
LRRTM3-202ENST00000472278 VPS13DQ5THJ4 4388 aa-0.48□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 214.4 ms