RNA–Protein interactions for RNA: ENST00000472278.1

LRRTM3-202, Transcript of leucine rich repeat transmembrane neuronal 3, humanhuman

TSL 2

Gene LRRTM3, Length 264 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3-202ENST00000472278 AEBP2Q6ZN18 517 aaPredicted RBP12.65□□□□□ -0.38
LRRTM3-202ENST00000472278 CHIC1Q5VXU3 224 aa11.57□□□□□ -0.56
LRRTM3-202ENST00000472278 SENP3Q9H4L4 574 aaPredicted RBP10.65□□□□□ -0.7
LRRTM3-202ENST00000472278 PHF23Q9BUL5 403 aaPredicted RBP10.55□□□□□ -0.72
LRRTM3-202ENST00000472278 POTEDQ86YR6 584 aa10.24□□□□□ -0.77
LRRTM3-202ENST00000472278 FOXD1Q16676 465 aa10.14□□□□□ -0.79
LRRTM3-202ENST00000472278 MSH5O43196 834 aa9.48□□□□□ -0.89
LRRTM3-202ENST00000472278 PIAS4Q8N2W9 510 aaPredicted RBP9.29□□□□□ -0.92
LRRTM3-202ENST00000472278 PPP6R1Q9UPN7 881 aa9.19□□□□□ -0.94
LRRTM3-202ENST00000472278 ADRA2BP18089 450 aa9.1□□□□□ -0.95
LRRTM3-202ENST00000472278 PLPPR3Q6T4P5 718 aa8.81□□□□□ -1
LRRTM3-202ENST00000472278 MAPK8IP2Q13387 824 aaPredicted RBP8.55□□□□□ -1.04
LRRTM3-202ENST00000472278 CACNB1Q02641 598 aaPredicted RBP8.51□□□□□ -1.05
LRRTM3-202ENST00000472278 DMRT2Q9Y5R5 561 aa8.42□□□□□ -1.06
LRRTM3-202ENST00000472278 RNF39Q9H2S5 420 aa8.15□□□□□ -1.1
LRRTM3-202ENST00000472278 DCAF8L1A6NGE4 600 aa8.13□□□□□ -1.11
LRRTM3-202ENST00000472278 SCAF1Q9H7N4 1312 aaKnown RBP8.06□□□□□ -1.12
LRRTM3-202ENST00000472278 HOXD11P31277 338 aaPredicted RBP7.91□□□□□ -1.14
LRRTM3-202ENST00000472278 C1QBPQ07021 282 aaKnown RBP7.91□□□□□ -1.14
LRRTM3-202ENST00000472278 POTEHQ6S545 545 aa7.88□□□□□ -1.15
LRRTM3-202ENST00000472278 PPP4R3CPQ6ZMV5 832 aa7.75□□□□□ -1.17
LRRTM3-202ENST00000472278 RNF216Q9NWF9 866 aaPredicted RBP7.69□□□□□ -1.18
LRRTM3-202ENST00000472278 CNKSR2Q8WXI2 1034 aa7.64□□□□□ -1.19
LRRTM3-202ENST00000472278 DNAJC5BQ9UF47 199 aa7.6□□□□□ -1.19
LRRTM3-202ENST00000472278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.52□□□□□ -1.21
LRRTM3-202ENST00000472278 DSG3P32926 999 aa7.49□□□□□ -1.21
LRRTM3-202ENST00000472278 SPINK5Q9NQ38 1064 aaPredicted RBP7.49□□□□□ -1.21
LRRTM3-202ENST00000472278 U3KPZ7 1027 aaPredicted RBP7.39□□□□□ -1.23
LRRTM3-202ENST00000472278 CAPN15O75808 1086 aa7.38□□□□□ -1.23
LRRTM3-202ENST00000472278 ABCB7O75027 752 aa7.26□□□□□ -1.25
LRRTM3-202ENST00000472278 NPM3O75607 178 aaKnown RBP7.23□□□□□ -1.25
LRRTM3-202ENST00000472278 TRHP20396 242 aaPredicted RBP7.18□□□□□ -1.26
LRRTM3-202ENST00000472278 CHRDL2Q6WN34 429 aa7.16□□□□□ -1.26
LRRTM3-202ENST00000472278 NCBP3Q53F19 620 aaKnown RBP7.15□□□□□ -1.26
LRRTM3-202ENST00000472278 SP7Q8TDD2 431 aaPredicted RBP7.15□□□□□ -1.26
LRRTM3-202ENST00000472278 SLC4A2P04920 1241 aa7.08□□□□□ -1.28
LRRTM3-202ENST00000472278 ZNF219Q9P2Y4 722 aaPredicted RBP7.01□□□□□ -1.29
LRRTM3-202ENST00000472278 RBM42Q9BTD8 480 aaKnown RBP6.99□□□□□ -1.29
LRRTM3-202ENST00000472278 EVX2Q03828 476 aa6.94□□□□□ -1.3
LRRTM3-202ENST00000472278 PIP4P2Q8N4L2 257 aa6.93□□□□□ -1.3
LRRTM3-202ENST00000472278 HAX1O00165 279 aa6.9□□□□□ -1.3
LRRTM3-202ENST00000472278 POLA2Q14181 598 aa6.88□□□□□ -1.31
LRRTM3-202ENST00000472278 APLP2Q06481 763 aa6.85□□□□□ -1.31
LRRTM3-202ENST00000472278 REM2Q8IYK8 340 aaPredicted RBP6.82□□□□□ -1.32
LRRTM3-202ENST00000472278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.79□□□□□ -1.32
LRRTM3-202ENST00000472278 HNRNPUL2Q1KMD3 747 aaKnown RBP6.79□□□□□ -1.32
LRRTM3-202ENST00000472278 SAMD1Q6SPF0 538 aaPredicted RBP6.79□□□□□ -1.32
LRRTM3-202ENST00000472278 AKT1S1Q96B36 256 aa6.79□□□□□ -1.32
LRRTM3-202ENST00000472278 PITPNM1O00562 1244 aa6.77□□□□□ -1.33
LRRTM3-202ENST00000472278 FXR2P51116 673 aaKnown RBP eCLIP6.77□□□□□ -1.33
LRRTM3-202ENST00000472278 KCNA4P22459 653 aa6.72□□□□□ -1.33
LRRTM3-202ENST00000472278 PLSCR2Q9NRY7 297 aa6.72□□□□□ -1.33
LRRTM3-202ENST00000472278 LHX8Q68G74 356 aa6.71□□□□□ -1.34
LRRTM3-202ENST00000472278 OSCARQ8IYS5 282 aa6.71□□□□□ -1.34
LRRTM3-202ENST00000472278 ATF5Q9Y2D1 282 aaPredicted RBP6.69□□□□□ -1.34
LRRTM3-202ENST00000472278 GABBR2O75899 941 aa6.63□□□□□ -1.35
LRRTM3-202ENST00000472278 MYCNP04198 464 aaPredicted RBP6.59□□□□□ -1.35
LRRTM3-202ENST00000472278 C19orf67A6NJJ6 358 aa6.57□□□□□ -1.36
LRRTM3-202ENST00000472278 POTEIP0CG38 1075 aa6.57□□□□□ -1.36
LRRTM3-202ENST00000472278 PRKAR2AP13861 404 aaKnown RBP6.57□□□□□ -1.36
LRRTM3-202ENST00000472278 ZBTB12Q9Y330 459 aaPredicted RBP6.51□□□□□ -1.37
LRRTM3-202ENST00000472278 CHADLQ6NUI6 762 aa6.47□□□□□ -1.37
LRRTM3-202ENST00000472278 CLEC11AQ9Y240 323 aa6.46□□□□□ -1.38
LRRTM3-202ENST00000472278 POTEB2H3BUK9 544 aa6.37□□□□□ -1.39
LRRTM3-202ENST00000472278 OTUD5Q96G74 571 aa6.37□□□□□ -1.39
LRRTM3-202ENST00000472278 POTEMA6NI47 508 aa6.36□□□□□ -1.39
LRRTM3-202ENST00000472278 EHMT2Q96KQ7 1210 aa6.36□□□□□ -1.39
LRRTM3-202ENST00000472278 SPDYE2BA6NHP3 402 aa6.35□□□□□ -1.39
LRRTM3-202ENST00000472278 SPDYE6P0CI01 402 aa6.35□□□□□ -1.39
LRRTM3-202ENST00000472278 SPDYE2Q495Y8 402 aa6.35□□□□□ -1.39
LRRTM3-202ENST00000472278 SPDYE1Q8NFV5 336 aaPredicted RBP6.35□□□□□ -1.39
LRRTM3-202ENST00000472278 SLC4A1APQ9BWU0 796 aaKnown RBP6.35□□□□□ -1.39
LRRTM3-202ENST00000472278 POTEGQ6S5H5 508 aa6.32□□□□□ -1.4
LRRTM3-202ENST00000472278 CD44P16070 742 aaKnown RBP6.31□□□□□ -1.4
LRRTM3-202ENST00000472278 MKRN4PQ13434 485 aaPredicted RBP6.31□□□□□ -1.4
LRRTM3-202ENST00000472278 SSUH2Q9Y2M2 353 aa6.29□□□□□ -1.4
LRRTM3-202ENST00000472278 FOXD4L1Q9NU39 408 aa6.28□□□□□ -1.4
LRRTM3-202ENST00000472278 DCBLD2Q96PD2 775 aa6.26□□□□□ -1.41
LRRTM3-202ENST00000472278 ZNF692Q9BU19 519 aaPredicted RBP6.26□□□□□ -1.41
LRRTM3-202ENST00000472278 FARP1Q9Y4F1 1045 aaPredicted RBP6.24□□□□□ -1.41
LRRTM3-202ENST00000472278 ZBTB22O15209 634 aa6.23□□□□□ -1.41
LRRTM3-202ENST00000472278 GALR2O43603 387 aaPredicted RBP6.23□□□□□ -1.41
LRRTM3-202ENST00000472278 PRR29P0C7W0 189 aa6.23□□□□□ -1.41
LRRTM3-202ENST00000472278 LCE2DQ5TA82 110 aaPredicted RBP6.23□□□□□ -1.41
LRRTM3-202ENST00000472278 POTEJP0CG39 1038 aa6.21□□□□□ -1.42
LRRTM3-202ENST00000472278 FBLN2P98095 1184 aa6.21□□□□□ -1.42
LRRTM3-202ENST00000472278 PELP1Q8IZL8 1130 aaKnown RBP6.21□□□□□ -1.42
LRRTM3-202ENST00000472278 CSRNP3Q8WYN3 585 aa6.2□□□□□ -1.42
LRRTM3-202ENST00000472278 PABPN1Q86U42 306 aaKnown RBP eCLIP6.19□□□□□ -1.42
LRRTM3-202ENST00000472278 ZNF579Q8NAF0 562 aaKnown RBP6.17□□□□□ -1.42
LRRTM3-202ENST00000472278 ZRANB1Q9UGI0 708 aa6.16□□□□□ -1.42
LRRTM3-202ENST00000472278 CLCN6P51797 869 aa6.11□□□□□ -1.43
LRRTM3-202ENST00000472278 PHF12Q96QT6 1004 aa6.11□□□□□ -1.43
LRRTM3-202ENST00000472278 FAM163AQ96GL9 167 aaPredicted RBP6.1□□□□□ -1.43
LRRTM3-202ENST00000472278 PCDH10Q9P2E7 1040 aa6.1□□□□□ -1.43
LRRTM3-202ENST00000472278 ATXN8OSP0DMR3 200 aa6.06□□□□□ -1.44
LRRTM3-202ENST00000472278 CREBZFQ9NS37 354 aa6.06□□□□□ -1.44
LRRTM3-202ENST00000472278 METRNQ9UJH8 293 aa6.04□□□□□ -1.44
LRRTM3-202ENST00000472278 POTEFA5A3E0 1075 aa5.99□□□□□ -1.45
LRRTM3-202ENST00000472278 ATMINO43313 823 aaPredicted RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms