RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 PCOTHQ58A44 107 aa1.7□□□□□ -2.14
CDHR3-208ENST00000471910 C10orf55Q5SWW7 151 aa1.7□□□□□ -2.14
CDHR3-208ENST00000471910 MYO9AB2RTY4 2548 aa1.69□□□□□ -2.14
CDHR3-208ENST00000471910 MGAQ8IWI9 3026 aa1.69□□□□□ -2.14
CDHR3-208ENST00000471910 TRAV10A0A0B4J240 114 aa1.69□□□□□ -2.14
CDHR3-208ENST00000471910 TRBV10-1A0A0K0K1A3 114 aa1.69□□□□□ -2.14
CDHR3-208ENST00000471910 CNBPP62633 177 aaKnown RBP1.69□□□□□ -2.14
CDHR3-208ENST00000471910 C9orf116Q5BN46 136 aaPredicted RBP1.69□□□□□ -2.14
CDHR3-208ENST00000471910 CASC2Q6XLA1 102 aa1.69□□□□□ -2.14
CDHR3-208ENST00000471910 LINC00467Q9BRT7 94 aa1.69□□□□□ -2.14
CDHR3-208ENST00000471910 TTTY12Q9BZ98 90 aa1.69□□□□□ -2.14
CDHR3-208ENST00000471910 CDKN2A-AS1Q9UH64 79 aa1.69□□□□□ -2.14
CDHR3-208ENST00000471910 PSORS1C2Q9UIG4 136 aa1.69□□□□□ -2.14
CDHR3-208ENST00000471910 ASH1LQ9NR48 2969 aaKnown RBP1.69□□□□□ -2.14
CDHR3-208ENST00000471910 ETDCA0A1B0GVM5 59 aa1.68□□□□□ -2.14
CDHR3-208ENST00000471910 ODF3BA8MYP8 253 aa1.68□□□□□ -2.14
CDHR3-208ENST00000471910 CHKB-CPT1BH3BT56 60 aa1.68□□□□□ -2.14
CDHR3-208ENST00000471910 H3BUA1 57 aa1.68□□□□□ -2.14
CDHR3-208ENST00000471910 NDUFA4O00483 81 aa1.68□□□□□ -2.14
CDHR3-208ENST00000471910 COX7BP24311 80 aa1.68□□□□□ -2.14
CDHR3-208ENST00000471910 HAMPP81172 84 aa1.68□□□□□ -2.14
CDHR3-208ENST00000471910 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.68□□□□□ -2.14
CDHR3-208ENST00000471910 LEAP2Q969E1 77 aa1.68□□□□□ -2.14
CDHR3-208ENST00000471910 KCNQ1DNQ9H478 68 aa1.68□□□□□ -2.14
CDHR3-208ENST00000471910 XAGE1AQ9HD64 81 aa1.68□□□□□ -2.14
CDHR3-208ENST00000471910 LINC01558Q9Y6Z2 57 aa1.68□□□□□ -2.14
CDHR3-208ENST00000471910 MINOS1-NBL1R4GNA1 71 aa1.68□□□□□ -2.14
CDHR3-208ENST00000471910 MED13LQ71F56 2210 aa1.68□□□□□ -2.14
CDHR3-208ENST00000471910 APC2O95996 2303 aa1.68□□□□□ -2.14
CDHR3-208ENST00000471910 GCN1Q92616 2671 aaKnown RBP1.68□□□□□ -2.14
CDHR3-208ENST00000471910 CEP250Q9BV73 2442 aa1.68□□□□□ -2.14
CDHR3-208ENST00000471910 SPTBN2O15020 2390 aa1.67□□□□□ -2.14
CDHR3-208ENST00000471910 IGHV3-64A0A075B6Q5 118 aa1.67□□□□□ -2.14
CDHR3-208ENST00000471910 IGHV3-73A0A0B4J1V6 119 aa1.67□□□□□ -2.14
CDHR3-208ENST00000471910 CLPSL1A2RUU4 121 aa1.67□□□□□ -2.14
CDHR3-208ENST00000471910 CCL18P55774 89 aa1.67□□□□□ -2.14
CDHR3-208ENST00000471910 MINOS1Q5TGZ0 78 aa1.67□□□□□ -2.14
CDHR3-208ENST00000471910 LINC00575Q6W349 94 aa1.67□□□□□ -2.14
CDHR3-208ENST00000471910 COX7B2Q8TF08 81 aa1.67□□□□□ -2.14
CDHR3-208ENST00000471910 LINC00208Q96KT6 92 aa1.67□□□□□ -2.14
CDHR3-208ENST00000471910 PLAC8Q9NZF1 115 aa1.67□□□□□ -2.14
CDHR3-208ENST00000471910 EYSQ5T1H1 3165 aa1.67□□□□□ -2.14
CDHR3-208ENST00000471910 RANBP2P49792 3224 aaKnown RBP1.66□□□□□ -2.14
CDHR3-208ENST00000471910 TRGV2A0A075B6R0 118 aa1.66□□□□□ -2.14
CDHR3-208ENST00000471910 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.66□□□□□ -2.14
CDHR3-208ENST00000471910 A8MTW9 85 aa1.66□□□□□ -2.14
CDHR3-208ENST00000471910 KRTAP21-3Q3LHN1 58 aa1.66□□□□□ -2.14
CDHR3-208ENST00000471910 Q8IZM0 81 aa1.66□□□□□ -2.14
CDHR3-208ENST00000471910 WFDC9Q8NEX5 89 aa1.66□□□□□ -2.14
CDHR3-208ENST00000471910 PKDREJQ9NTG1 2253 aa1.66□□□□□ -2.14
CDHR3-208ENST00000471910 C2CD3Q4AC94 2353 aa1.66□□□□□ -2.14
CDHR3-208ENST00000471910 ZDBF2Q9HCK1 2354 aa1.66□□□□□ -2.14
CDHR3-208ENST00000471910 MAP1BP46821 2468 aaKnown RBP1.66□□□□□ -2.14
CDHR3-208ENST00000471910 COL6A3P12111 3177 aa1.66□□□□□ -2.14
CDHR3-208ENST00000471910 UTRNP46939 3433 aa1.66□□□□□ -2.14
CDHR3-208ENST00000471910 NBEAQ8NFP9 2946 aa1.66□□□□□ -2.14
CDHR3-208ENST00000471910 EP400Q96L91 3159 aa1.65□□□□□ -2.14
CDHR3-208ENST00000471910 PCNX1Q96RV3 2341 aa1.65□□□□□ -2.15
CDHR3-208ENST00000471910 SDK1Q7Z5N4 2213 aa1.65□□□□□ -2.15
CDHR3-208ENST00000471910 LINC00158P58513 81 aa1.65□□□□□ -2.15
CDHR3-208ENST00000471910 Q6ZTI0 123 aa1.65□□□□□ -2.15
CDHR3-208ENST00000471910 CNEP1R1Q8N9A8 125 aa1.65□□□□□ -2.15
CDHR3-208ENST00000471910 SPTSSBQ8NFR3 76 aa1.65□□□□□ -2.15
CDHR3-208ENST00000471910 USMG5Q96IX5 58 aa1.65□□□□□ -2.15
CDHR3-208ENST00000471910 RETNLBQ9BQ08 111 aa1.65□□□□□ -2.15
CDHR3-208ENST00000471910 TTC28Q96AY4 2481 aa1.65□□□□□ -2.15
CDHR3-208ENST00000471910 COL6A6A6NMZ7 2263 aa1.65□□□□□ -2.15
CDHR3-208ENST00000471910 JMJD1CQ15652 2540 aa1.64□□□□□ -2.15
CDHR3-208ENST00000471910 SPG11Q96JI7 2443 aa1.64□□□□□ -2.15
CDHR3-208ENST00000471910 A0A096LNT2 108 aa1.64□□□□□ -2.15
CDHR3-208ENST00000471910 CCL3L1P16619 93 aa1.64□□□□□ -2.15
CDHR3-208ENST00000471910 DEFB133Q30KQ1 61 aa1.64□□□□□ -2.15
CDHR3-208ENST00000471910 PRR15LQ9BU68 103 aa1.64□□□□□ -2.15
CDHR3-208ENST00000471910 WFDC10AQ9H1F0 79 aa1.64□□□□□ -2.15
CDHR3-208ENST00000471910 ROS1P08922 2347 aa1.64□□□□□ -2.15
CDHR3-208ENST00000471910 HELZ2Q9BYK8 2649 aaKnown RBP1.64□□□□□ -2.15
CDHR3-208ENST00000471910 FRYQ5TBA9 3013 aa1.63□□□□□ -2.15
CDHR3-208ENST00000471910 IGLV5-48A0A075B6I7 105 aa1.63□□□□□ -2.15
CDHR3-208ENST00000471910 TFF1P04155 84 aa1.63□□□□□ -2.15
CDHR3-208ENST00000471910 COX6A2Q02221 97 aa1.63□□□□□ -2.15
CDHR3-208ENST00000471910 AKAP6Q13023 2319 aa1.63□□□□□ -2.15
CDHR3-208ENST00000471910 LAMA2P24043 3122 aaKnown RBP1.63□□□□□ -2.15
CDHR3-208ENST00000471910 CNOT1A5YKK6 2376 aaKnown RBP1.63□□□□□ -2.15
CDHR3-208ENST00000471910 CACNA1HO95180 2353 aa1.63□□□□□ -2.15
CDHR3-208ENST00000471910 VPS13AQ96RL7 3174 aa1.63□□□□□ -2.15
CDHR3-208ENST00000471910 CFAP47Q6ZTR5 3102 aa1.62□□□□□ -2.15
CDHR3-208ENST00000471910 SZT2Q5T011 3432 aa1.62□□□□□ -2.15
CDHR3-208ENST00000471910 WNK1Q9H4A3 2382 aa1.62□□□□□ -2.15
CDHR3-208ENST00000471910 GVQW2A0A096LPI5 108 aaPredicted RBP1.62□□□□□ -2.15
CDHR3-208ENST00000471910 SPAG11BQ08648 103 aa1.62□□□□□ -2.15
CDHR3-208ENST00000471910 C9orf163Q8N9P6 203 aa1.62□□□□□ -2.15
CDHR3-208ENST00000471910 DEFB108BQ8NET1 73 aa1.62□□□□□ -2.15
CDHR3-208ENST00000471910 SPRR4Q96PI1 79 aa1.62□□□□□ -2.15
CDHR3-208ENST00000471910 ZZEF1O43149 2961 aa1.62□□□□□ -2.15
CDHR3-208ENST00000471910 FAM208BQ5VWN6 2430 aa1.61□□□□□ -2.15
CDHR3-208ENST00000471910 VCANP13611 3396 aa1.61□□□□□ -2.15
CDHR3-208ENST00000471910 PIEZO2Q9H5I5 2752 aa1.61□□□□□ -2.15
CDHR3-208ENST00000471910 ACACAQ13085 2346 aa1.61□□□□□ -2.15
CDHR3-208ENST00000471910 UNC80Q8N2C7 3258 aa1.61□□□□□ -2.15
CDHR3-208ENST00000471910 DEFB131BA0A096LNP1 70 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms