RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 PRLHP81277 87 aa-2.28□□□□□ -2.77
COMMD3-209ENST00000471350 SRCAPQ6ZRS2 3230 aa-2.28□□□□□ -2.77
COMMD3-209ENST00000471350 ALKQ9UM73 1620 aa-2.28□□□□□ -2.77
COMMD3-209ENST00000471350 TRRAPQ9Y4A5 3859 aa-2.28□□□□□ -2.77
COMMD3-209ENST00000471350 BPTFQ12830 3046 aa-2.28□□□□□ -2.78
COMMD3-209ENST00000471350 K7EP13 123 aa-2.29□□□□□ -2.78
COMMD3-209ENST00000471350 CSMD1Q96PZ7 3565 aa-2.29□□□□□ -2.78
COMMD3-209ENST00000471350 RGPD2P0DJD1 1756 aa-2.3□□□□□ -2.78
COMMD3-209ENST00000471350 CFAP46Q8IYW2 2715 aa-2.3□□□□□ -2.78
COMMD3-209ENST00000471350 RPL38P63173 70 aaKnown RBP-2.31□□□□□ -2.78
COMMD3-209ENST00000471350 PMCHL1Q16048 86 aa-2.31□□□□□ -2.78
COMMD3-209ENST00000471350 SAMD9Q5K651 1589 aa-2.32□□□□□ -2.78
COMMD3-209ENST00000471350 C4AP0C0L4 1744 aa-2.32□□□□□ -2.78
COMMD3-209ENST00000471350 C4BP0C0L5 1744 aa-2.32□□□□□ -2.78
COMMD3-209ENST00000471350 SMR3BP02814 79 aaPredicted RBP-2.33□□□□□ -2.78
COMMD3-209ENST00000471350 ASIPP42127 132 aa-2.33□□□□□ -2.78
COMMD3-209ENST00000471350 SVBPQ8N300 66 aa-2.33□□□□□ -2.78
COMMD3-209ENST00000471350 UBE2D4Q9Y2X8 147 aa-2.33□□□□□ -2.78
COMMD3-209ENST00000471350 H3BQ15 152 aa-2.34□□□□□ -2.78
COMMD3-209ENST00000471350 MT1EP04732 61 aa-2.34□□□□□ -2.78
COMMD3-209ENST00000471350 DNAH5Q8TE73 4624 aa-2.34□□□□□ -2.78
COMMD3-209ENST00000471350 SHPRHQ149N8 1683 aa-2.34□□□□□ -2.78
COMMD3-209ENST00000471350 PREX1Q8TCU6 1659 aa-2.34□□□□□ -2.78
COMMD3-209ENST00000471350 SPTAN1Q13813 2472 aaKnown RBP-2.35□□□□□ -2.79
COMMD3-209ENST00000471350 TRBV25-1A0A075B6N4 114 aa-2.35□□□□□ -2.79
COMMD3-209ENST00000471350 CACFD1Q9UGQ2 172 aa-2.35□□□□□ -2.79
COMMD3-209ENST00000471350 DNAH17Q9UFH2 4485 aa-2.35□□□□□ -2.79
COMMD3-209ENST00000471350 TOPAZ1Q8N9V7 1692 aa-2.36□□□□□ -2.79
COMMD3-209ENST00000471350 MAGI2Q86UL8 1455 aa-2.36□□□□□ -2.79
COMMD3-209ENST00000471350 SNAPC5O75971 98 aa-2.36□□□□□ -2.79
COMMD3-209ENST00000471350 ARHGAP5Q13017 1502 aa-2.37□□□□□ -2.79
COMMD3-209ENST00000471350 TMEM218A2RU14 115 aa-2.37□□□□□ -2.79
COMMD3-209ENST00000471350 C3orf79P0CE67 100 aa-2.37□□□□□ -2.79
COMMD3-209ENST00000471350 IGLC2P0DOY2 106 aa-2.37□□□□□ -2.79
COMMD3-209ENST00000471350 IGLC3P0DOY3 106 aa-2.37□□□□□ -2.79
COMMD3-209ENST00000471350 FOCADQ5VW36 1801 aa-2.38□□□□□ -2.79
COMMD3-209ENST00000471350 KIF20BQ96Q89 1820 aa-2.38□□□□□ -2.79
COMMD3-209ENST00000471350 NDUFC1O43677 76 aa-2.38□□□□□ -2.79
COMMD3-209ENST00000471350 COX7BP24311 80 aa-2.38□□□□□ -2.79
COMMD3-209ENST00000471350 CCDC58Q4VC31 144 aa-2.38□□□□□ -2.79
COMMD3-209ENST00000471350 MON2Q7Z3U7 1717 aa-2.38□□□□□ -2.79
COMMD3-209ENST00000471350 ABCC2Q92887 1545 aa-2.38□□□□□ -2.79
COMMD3-209ENST00000471350 EYSQ5T1H1 3165 aa-2.39□□□□□ -2.79
COMMD3-209ENST00000471350 PRO3102Q9H379 93 aa-2.39□□□□□ -2.79
COMMD3-209ENST00000471350 FAM135AQ9P2D6 1515 aa-2.39□□□□□ -2.79
COMMD3-209ENST00000471350 RGPD8O14715 1765 aaPredicted RBP-2.39□□□□□ -2.79
COMMD3-209ENST00000471350 RGPD5Q99666 1765 aa-2.39□□□□□ -2.79
COMMD3-209ENST00000471350 SCN11AQ9UI33 1791 aa-2.39□□□□□ -2.79
COMMD3-209ENST00000471350 LRRC9Q6ZRR7 1453 aa-2.39□□□□□ -2.79
COMMD3-209ENST00000471350 C5P01031 1676 aa-2.4□□□□□ -2.79
COMMD3-209ENST00000471350 UQCRHP07919 91 aa-2.4□□□□□ -2.79
COMMD3-209ENST00000471350 LINC00158P58513 81 aa-2.4□□□□□ -2.79
COMMD3-209ENST00000471350 ALKAL2Q6UX46 152 aa-2.4□□□□□ -2.79
COMMD3-209ENST00000471350 MT1LQ93083 61 aa-2.4□□□□□ -2.79
COMMD3-209ENST00000471350 IER3IP1Q9Y5U9 82 aa-2.4□□□□□ -2.79
COMMD3-209ENST00000471350 MYOM2P54296 1465 aa-2.4□□□□□ -2.79
COMMD3-209ENST00000471350 UBR3Q6ZT12 1888 aa-2.41□□□□□ -2.79
COMMD3-209ENST00000471350 SMG1Q96Q15 3661 aaKnown RBP-2.41□□□□□ -2.79
COMMD3-209ENST00000471350 hADV29S1A0JD25 119 aa-2.42□□□□□ -2.8
COMMD3-209ENST00000471350 MPC2O95563 127 aa-2.42□□□□□ -2.8
COMMD3-209ENST00000471350 HMGN3Q15651 99 aa-2.42□□□□□ -2.8
COMMD3-209ENST00000471350 CLPSL2Q6UWE3 100 aa-2.42□□□□□ -2.8
COMMD3-209ENST00000471350 PLXNC1O60486 1568 aa-2.43□□□□□ -2.8
COMMD3-209ENST00000471350 D6R8Y8 96 aa-2.43□□□□□ -2.8
COMMD3-209ENST00000471350 MUSTN1Q8IVN3 82 aa-2.43□□□□□ -2.8
COMMD3-209ENST00000471350 QSER1Q2KHR3 1735 aa-2.43□□□□□ -2.8
COMMD3-209ENST00000471350 TSC22D3Q99576 134 aa-2.44□□□□□ -2.8
COMMD3-209ENST00000471350 SPTBN5Q9NRC6 3674 aaKnown RBP-2.44□□□□□ -2.8
COMMD3-209ENST00000471350 MLH3Q9UHC1 1453 aa-2.45□□□□□ -2.8
COMMD3-209ENST00000471350 NDUFA2O43678 99 aa-2.45□□□□□ -2.8
COMMD3-209ENST00000471350 MT1GP13640 62 aa-2.45□□□□□ -2.8
COMMD3-209ENST00000471350 TRGV9Q99603 122 aa-2.45□□□□□ -2.8
COMMD3-209ENST00000471350 RAPGEF2Q9Y4G8 1499 aa-2.45□□□□□ -2.8
COMMD3-209ENST00000471350 CUL7Q14999 1698 aa-2.46□□□□□ -2.8
COMMD3-209ENST00000471350 TNRC6CQ9HCJ0 1690 aaKnown RBP-2.46□□□□□ -2.8
COMMD3-209ENST00000471350 LEPROTL1O95214 131 aa-2.46□□□□□ -2.8
COMMD3-209ENST00000471350 GNG4P50150 75 aa-2.46□□□□□ -2.8
COMMD3-209ENST00000471350 DEFB106AQ8N104 65 aa-2.46□□□□□ -2.8
COMMD3-209ENST00000471350 DNAH10Q8IVF4 4471 aa-2.47□□□□□ -2.8
COMMD3-209ENST00000471350 LOC105371267A0A1B0GV96 52 aa-2.47□□□□□ -2.8
COMMD3-209ENST00000471350 PPP3R1P63098 170 aa-2.47□□□□□ -2.8
COMMD3-209ENST00000471350 SERP2Q8N6R1 65 aa-2.47□□□□□ -2.8
COMMD3-209ENST00000471350 ETDBQ3ZM63 59 aa-2.48□□□□□ -2.81
COMMD3-209ENST00000471350 ZNF720Q7Z2F6 126 aa-2.48□□□□□ -2.81
COMMD3-209ENST00000471350 KRTAP8-1Q8IUC2 63 aa-2.48□□□□□ -2.81
COMMD3-209ENST00000471350 ROCK2O75116 1388 aaKnown RBP-2.49□□□□□ -2.81
COMMD3-209ENST00000471350 NRKQ7Z2Y5 1582 aa-2.49□□□□□ -2.81
COMMD3-209ENST00000471350 USP32Q8NFA0 1604 aa-2.49□□□□□ -2.81
COMMD3-209ENST00000471350 WIZO95785 1651 aa-2.49□□□□□ -2.81
COMMD3-209ENST00000471350 DEFB130BP0DP73 79 aa-2.49□□□□□ -2.81
COMMD3-209ENST00000471350 DEFB130AP0DP74 79 aa-2.49□□□□□ -2.81
COMMD3-209ENST00000471350 KRTAP20-1Q3LI63 56 aa-2.49□□□□□ -2.81
COMMD3-209ENST00000471350 CHD1O14646 1710 aa-2.5□□□□□ -2.81
COMMD3-209ENST00000471350 MT1MQ8N339 61 aa-2.5□□□□□ -2.81
COMMD3-209ENST00000471350 GAFA1Q96PS6 74 aa-2.5□□□□□ -2.81
COMMD3-209ENST00000471350 ADGRG4Q8IZF6 3080 aa-2.5□□□□□ -2.81
COMMD3-209ENST00000471350 SPENQ96T58 3664 aaKnown RBP-2.51□□□□□ -2.81
COMMD3-209ENST00000471350 ITPR2Q14571 2701 aa-2.51□□□□□ -2.81
COMMD3-209ENST00000471350 ANKRD36BQ8N2N9 1353 aa-2.51□□□□□ -2.81
COMMD3-209ENST00000471350 TIAM2Q8IVF5 1701 aa-2.51□□□□□ -2.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms