RNA–Protein interactions for RNA: ENST00000470951.5

SRGAP3-204, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-204ENST00000470951 NIPBLQ6KC79 2804 aaeCLIP7.64□□□□□ -1.19
SRGAP3-204ENST00000470951 FN1P02751 2386 aaKnown RBP7.64□□□□□ -1.19
SRGAP3-204ENST00000470951 DIRC1Q969H9 104 aa7.64□□□□□ -1.19
SRGAP3-204ENST00000470951 GVQW2A0A096LPI5 108 aaPredicted RBP7.63□□□□□ -1.19
SRGAP3-204ENST00000470951 SPAG11BQ08648 103 aa7.63□□□□□ -1.19
SRGAP3-204ENST00000470951 LINC01006Q8NI28 216 aa7.63□□□□□ -1.19
SRGAP3-204ENST00000470951 JMJD1CQ15652 2540 aa7.63□□□□□ -1.19
SRGAP3-204ENST00000470951 NDUFS5O43920 106 aa7.63□□□□□ -1.19
SRGAP3-204ENST00000470951 Q6ZRP5 223 aa7.63□□□□□ -1.19
SRGAP3-204ENST00000470951 TMEM254Q8TBM7 123 aa7.63□□□□□ -1.19
SRGAP3-204ENST00000470951 IGLV10-54A0A075B6I4 117 aa7.62□□□□□ -1.19
SRGAP3-204ENST00000470951 ANK3Q12955 4377 aaKnown RBP7.62□□□□□ -1.19
SRGAP3-204ENST00000470951 SETD2Q9BYW2 2564 aaPredicted RBP7.62□□□□□ -1.19
SRGAP3-204ENST00000470951 hDV103S1A0JD37 113 aa7.62□□□□□ -1.19
SRGAP3-204ENST00000470951 UNQ6190/PRO20217Q6UXQ8 127 aa7.62□□□□□ -1.19
SRGAP3-204ENST00000470951 FUSP35637 526 aaKnown RBP eCLIP7.61□□□□□ -1.19
SRGAP3-204ENST00000470951 UBE2BP63146 152 aa7.61□□□□□ -1.19
SRGAP3-204ENST00000470951 C10orf25Q5T742 122 aa7.61□□□□□ -1.19
SRGAP3-204ENST00000470951 A0A096LPF7 62 aa7.6□□□□□ -1.19
SRGAP3-204ENST00000470951 INAFM1C9JVW0 142 aa7.6□□□□□ -1.19
SRGAP3-204ENST00000470951 COX7BP24311 80 aa7.6□□□□□ -1.19
SRGAP3-204ENST00000470951 PHF5AQ7RTV0 110 aaKnown RBP7.6□□□□□ -1.19
SRGAP3-204ENST00000470951 ESM1Q9NQ30 184 aa7.6□□□□□ -1.19
SRGAP3-204ENST00000470951 C8orf87E5RJ46 101 aa7.6□□□□□ -1.19
SRGAP3-204ENST00000470951 ELOF1P60002 83 aaKnown RBP7.6□□□□□ -1.19
SRGAP3-204ENST00000470951 NREPQ16612 68 aa7.6□□□□□ -1.19
SRGAP3-204ENST00000470951 ZNF73O43830 326 aaPredicted RBP7.59□□□□□ -1.19
SRGAP3-204ENST00000470951 BPY2O14599 106 aa7.58□□□□□ -1.2
SRGAP3-204ENST00000470951 PRR34Q9NV39 138 aa7.57□□□□□ -1.2
SRGAP3-204ENST00000470951 NF1P21359 2839 aa7.57□□□□□ -1.2
SRGAP3-204ENST00000470951 LELP1Q5T871 98 aa7.56□□□□□ -1.2
SRGAP3-204ENST00000470951 TRAV22A0A0B4J277 110 aa7.55□□□□□ -1.2
SRGAP3-204ENST00000470951 SYCNQ0VAF6 134 aa7.55□□□□□ -1.2
SRGAP3-204ENST00000470951 SCXQ7RTU7 201 aa7.54□□□□□ -1.2
SRGAP3-204ENST00000470951 C6orf48Q9UBA6 75 aa7.54□□□□□ -1.2
SRGAP3-204ENST00000470951 CELA1Q9UNI1 258 aa7.54□□□□□ -1.2
SRGAP3-204ENST00000470951 FAM229AH3BQW9 127 aa7.53□□□□□ -1.2
SRGAP3-204ENST00000470951 OCR1Q9BZK8 76 aa7.52□□□□□ -1.2
SRGAP3-204ENST00000470951 IGKV4-1P06312 121 aa7.52□□□□□ -1.21
SRGAP3-204ENST00000470951 XAGE1AQ9HD64 81 aa7.52□□□□□ -1.21
SRGAP3-204ENST00000470951 A6NN06 94 aa7.51□□□□□ -1.21
SRGAP3-204ENST00000470951 ATP11AUNQ6ZP68 121 aa7.51□□□□□ -1.21
SRGAP3-204ENST00000470951 KLK12Q9UKR0 248 aa7.51□□□□□ -1.21
SRGAP3-204ENST00000470951 A0A1B0GW54 56 aa7.5□□□□□ -1.21
SRGAP3-204ENST00000470951 PSPHP1O15172 72 aa7.5□□□□□ -1.21
SRGAP3-204ENST00000470951 EGFEM1PQ0D2K5 195 aa7.5□□□□□ -1.21
SRGAP3-204ENST00000470951 ATRQ13535 2644 aa7.5□□□□□ -1.21
SRGAP3-204ENST00000470951 UBE2AP49459 152 aa7.49□□□□□ -1.21
SRGAP3-204ENST00000470951 HIGD2BQ4VC39 106 aa7.49□□□□□ -1.21
SRGAP3-204ENST00000470951 LCA10Q71F78 164 aa7.48□□□□□ -1.21
SRGAP3-204ENST00000470951 A8MU10 97 aa7.47□□□□□ -1.21
SRGAP3-204ENST00000470951 C16orf90A8MZG2 172 aa7.47□□□□□ -1.21
SRGAP3-204ENST00000470951 Q5VV11 94 aa7.47□□□□□ -1.21
SRGAP3-204ENST00000470951 C7orf65Q6ZTY9 151 aa7.47□□□□□ -1.21
SRGAP3-204ENST00000470951 C1orf64Q8NEQ6 169 aa7.47□□□□□ -1.21
SRGAP3-204ENST00000470951 CAMK2N2Q96S95 79 aa7.47□□□□□ -1.21
SRGAP3-204ENST00000470951 DEFB135Q30KP9 77 aa7.46□□□□□ -1.21
SRGAP3-204ENST00000470951 SPART-AS1P0CW21 52 aa7.46□□□□□ -1.22
SRGAP3-204ENST00000470951 IGLV5-48A0A075B6I7 105 aa7.45□□□□□ -1.22
SRGAP3-204ENST00000470951 A8MUN3 132 aa7.45□□□□□ -1.22
SRGAP3-204ENST00000470951 DEFB4AO15263 64 aa7.45□□□□□ -1.22
SRGAP3-204ENST00000470951 Q8N9L7 120 aa7.45□□□□□ -1.22
SRGAP3-204ENST00000470951 Q8NAQ8 132 aa7.45□□□□□ -1.22
SRGAP3-204ENST00000470951 CYP4F30PQ9H0H9 118 aa7.44□□□□□ -1.22
SRGAP3-204ENST00000470951 PSCAO43653 123 aa7.44□□□□□ -1.22
SRGAP3-204ENST00000470951 FBN1P35555 2871 aaKnown RBP7.43□□□□□ -1.22
SRGAP3-204ENST00000470951 LCE6AA0A183 80 aa7.43□□□□□ -1.22
SRGAP3-204ENST00000470951 SEC61BP60468 96 aaKnown RBP7.43□□□□□ -1.22
SRGAP3-204ENST00000470951 KCNQ1DNQ9H478 68 aa7.42□□□□□ -1.22
SRGAP3-204ENST00000470951 COL6A5A8TX70 2615 aa7.41□□□□□ -1.22
SRGAP3-204ENST00000470951 LRCOL1A6NCL2 159 aa7.41□□□□□ -1.22
SRGAP3-204ENST00000470951 HTN3P15516 51 aa7.41□□□□□ -1.22
SRGAP3-204ENST00000470951 KPRPQ5T749 579 aaPredicted RBP7.41□□□□□ -1.22
SRGAP3-204ENST00000470951 KRTAP26-1Q6PEX3 210 aa7.41□□□□□ -1.22
SRGAP3-204ENST00000470951 HIGD2AQ9BW72 106 aa7.41□□□□□ -1.22
SRGAP3-204ENST00000470951 C3orf84H3BNL1 204 aa7.4□□□□□ -1.22
SRGAP3-204ENST00000470951 TENM1Q9UKZ4 2725 aa7.4□□□□□ -1.22
SRGAP3-204ENST00000470951 DHRS4-AS1Q9P1J3 65 aa7.4□□□□□ -1.23
SRGAP3-204ENST00000470951 Q8N377 158 aa7.39□□□□□ -1.23
SRGAP3-204ENST00000470951 HCG22E2RYF7 251 aa7.39□□□□□ -1.23
SRGAP3-204ENST00000470951 H3BNG1 76 aa7.39□□□□□ -1.23
SRGAP3-204ENST00000470951 KRTAP10-3P60369 221 aa7.39□□□□□ -1.23
SRGAP3-204ENST00000470951 C15orf56Q8N910 161 aa7.39□□□□□ -1.23
SRGAP3-204ENST00000470951 SMIM29Q86T20 159 aa7.38□□□□□ -1.23
SRGAP3-204ENST00000470951 NKAPP1Q8N9T2 125 aa7.38□□□□□ -1.23
SRGAP3-204ENST00000470951 ZCCHC13Q8WW36 166 aaKnown RBP7.38□□□□□ -1.23
SRGAP3-204ENST00000470951 STAB1Q9NY15 2570 aa7.37□□□□□ -1.23
SRGAP3-204ENST00000470951 KRTAP24-1Q3LI83 254 aa7.37□□□□□ -1.23
SRGAP3-204ENST00000470951 LIMD2Q9BT23 127 aa7.36□□□□□ -1.23
SRGAP3-204ENST00000470951 SPTSSBQ8NFR3 76 aa7.36□□□□□ -1.23
SRGAP3-204ENST00000470951 CHKB-CPT1BH3BT56 60 aa7.35□□□□□ -1.23
SRGAP3-204ENST00000470951 Q8NBF4 154 aa7.35□□□□□ -1.23
SRGAP3-204ENST00000470951 NBEAL2Q6ZNJ1 2754 aa7.35□□□□□ -1.23
SRGAP3-204ENST00000470951 A0A1W2PNM2 257 aa7.35□□□□□ -1.23
SRGAP3-204ENST00000470951 WFDC10BQ8IUB3 73 aa7.35□□□□□ -1.23
SRGAP3-204ENST00000470951 DEFB105AQ8NG35 78 aa7.35□□□□□ -1.23
SRGAP3-204ENST00000470951 SPRR4Q96PI1 79 aa7.35□□□□□ -1.23
SRGAP3-204ENST00000470951 ETDCA0A1B0GVM5 59 aa7.34□□□□□ -1.23
SRGAP3-204ENST00000470951 Q6ZRX8 168 aa7.34□□□□□ -1.23
SRGAP3-204ENST00000470951 C7orf33Q8WU49 177 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms