RNA–Protein interactions for RNA: ENST00000470944.1

SOD1-203, Transcript of superoxide dismutase 1, humanhuman

TSL 2

Gene SOD1, Length 1,746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-203ENST00000470944 COL5A1-AS1Q5SY13 56 aa17.78■□□□□ 0.44
SOD1-203ENST00000470944 PRYO14603 147 aa17.78■□□□□ 0.44
SOD1-203ENST00000470944 C1orf137Q5JT78 98 aa17.78■□□□□ 0.44
SOD1-203ENST00000470944 A0A1B0GWB2 263 aa17.77■□□□□ 0.44
SOD1-203ENST00000470944 RPL37AP61513 92 aaKnown RBP17.77■□□□□ 0.44
SOD1-203ENST00000470944 H7C2G1 150 aa17.75■□□□□ 0.43
SOD1-203ENST00000470944 SPRR1AP35321 89 aa17.75■□□□□ 0.43
SOD1-203ENST00000470944 PRO1854Q9UHT4 67 aa17.75■□□□□ 0.43
SOD1-203ENST00000470944 KRTAP10-4P60372 401 aaPredicted RBP17.74■□□□□ 0.43
SOD1-203ENST00000470944 BATFQ16520 125 aa17.74■□□□□ 0.43
SOD1-203ENST00000470944 SMIM11BQ8TCY0 68 aa17.74■□□□□ 0.43
SOD1-203ENST00000470944 ZNF73O43830 326 aaPredicted RBP17.73■□□□□ 0.43
SOD1-203ENST00000470944 FAM229AH3BQW9 127 aa17.72■□□□□ 0.43
SOD1-203ENST00000470944 Q5VSD8 79 aa17.72■□□□□ 0.43
SOD1-203ENST00000470944 KRTAP4-16G5E9R7 235 aaPredicted RBP17.72■□□□□ 0.43
SOD1-203ENST00000470944 BCE1O60756 84 aa17.72■□□□□ 0.43
SOD1-203ENST00000470944 Q8N1X5 172 aa17.72■□□□□ 0.43
SOD1-203ENST00000470944 HERC2O95714 4834 aa17.7■□□□□ 0.42
SOD1-203ENST00000470944 C6orf99Q4VX62 202 aa17.69■□□□□ 0.42
SOD1-203ENST00000470944 SRRM2Q9UQ35 2752 aaKnown RBP17.68■□□□□ 0.42
SOD1-203ENST00000470944 FAM19A1Q7Z5A9 133 aa17.67■□□□□ 0.42
SOD1-203ENST00000470944 CBY1Q9Y3M2 126 aa17.67■□□□□ 0.42
SOD1-203ENST00000470944 IGLV7-43P04211 117 aa17.67■□□□□ 0.42
SOD1-203ENST00000470944 PRLHP81277 87 aa17.67■□□□□ 0.42
SOD1-203ENST00000470944 DIRC1Q969H9 104 aa17.66■□□□□ 0.42
SOD1-203ENST00000470944 ETDCA0A1B0GVM5 59 aa17.64■□□□□ 0.41
SOD1-203ENST00000470944 B5MCH6 92 aa17.64■□□□□ 0.41
SOD1-203ENST00000470944 PLA2G1BP04054 148 aaKnown RBP17.64■□□□□ 0.41
SOD1-203ENST00000470944 KRTAP13-1Q8IUC0 172 aa17.64■□□□□ 0.41
SOD1-203ENST00000470944 RPL28P46779 137 aaKnown RBP17.63■□□□□ 0.41
SOD1-203ENST00000470944 Q1RN00 199 aa17.63■□□□□ 0.41
SOD1-203ENST00000470944 UBE2AP49459 152 aa17.61■□□□□ 0.41
SOD1-203ENST00000470944 TSPAN13O95857 204 aa17.61■□□□□ 0.41
SOD1-203ENST00000470944 Q6ZRX8 168 aa17.58■□□□□ 0.41
SOD1-203ENST00000470944 ZNF861PO60384 105 aa17.58■□□□□ 0.4
SOD1-203ENST00000470944 ELOF1P60002 83 aaKnown RBP17.57■□□□□ 0.4
SOD1-203ENST00000470944 KRTAP4-5Q9BYR2 181 aa17.57■□□□□ 0.4
SOD1-203ENST00000470944 COX7BP24311 80 aa17.55■□□□□ 0.4
SOD1-203ENST00000470944 Q9BRP9 147 aa17.55■□□□□ 0.4
SOD1-203ENST00000470944 H0Y9J4 135 aa17.55■□□□□ 0.4
SOD1-203ENST00000470944 TRBV7-6A0A0J9YX20 115 aa17.54■□□□□ 0.4
SOD1-203ENST00000470944 TRIAP1O43715 76 aa17.54■□□□□ 0.4
SOD1-203ENST00000470944 HIGD2AQ9BW72 106 aa17.53■□□□□ 0.4
SOD1-203ENST00000470944 SMCR5Q8TEV8 140 aa17.52■□□□□ 0.39
SOD1-203ENST00000470944 NAA38Q9BRA0 125 aaKnown RBP17.51■□□□□ 0.39
SOD1-203ENST00000470944 PSMB2P49721 201 aa17.5■□□□□ 0.39
SOD1-203ENST00000470944 VAMP3Q15836 100 aa17.49■□□□□ 0.39
SOD1-203ENST00000470944 ERC2-IT1O76042 136 aa17.48■□□□□ 0.39
SOD1-203ENST00000470944 TAX1BP3O14907 124 aa17.46■□□□□ 0.39
SOD1-203ENST00000470944 SPINK6Q6UWN8 80 aa17.46■□□□□ 0.39
SOD1-203ENST00000470944 PKHD1L1Q86WI1 4243 aa17.44■□□□□ 0.38
SOD1-203ENST00000470944 LINC00575Q6W349 94 aa17.43■□□□□ 0.38
SOD1-203ENST00000470944 FAM218AQ96MZ4 157 aa17.42■□□□□ 0.38
SOD1-203ENST00000470944 DHRS4-AS1Q9P1J3 65 aa17.41■□□□□ 0.38
SOD1-203ENST00000470944 H0YGX0 51 aa17.4■□□□□ 0.38
SOD1-203ENST00000470944 CLEC2BQ92478 149 aa17.4■□□□□ 0.38
SOD1-203ENST00000470944 ABCA13Q86UQ4 5058 aa17.4■□□□□ 0.38
SOD1-203ENST00000470944 INAFM2P0DMQ5 153 aa17.39■□□□□ 0.37
SOD1-203ENST00000470944 H3BUT2 72 aa17.38■□□□□ 0.37
SOD1-203ENST00000470944 C9orf118A6NHY6 69 aa17.37■□□□□ 0.37
SOD1-203ENST00000470944 COX6CP09669 75 aa17.37■□□□□ 0.37
SOD1-203ENST00000470944 ST20-AS1Q8NBB2 130 aa17.36■□□□□ 0.37
SOD1-203ENST00000470944 SCGB1C2P0DMR2 95 aa17.35■□□□□ 0.37
SOD1-203ENST00000470944 hADV29S1A0JD25 119 aa17.34■□□□□ 0.37
SOD1-203ENST00000470944 SLC25A20O43772 301 aa17.33■□□□□ 0.37
SOD1-203ENST00000470944 UBE2V1Q13404 147 aa17.3■□□□□ 0.36
SOD1-203ENST00000470944 SPRR4Q96PI1 79 aa17.3■□□□□ 0.36
SOD1-203ENST00000470944 ANAPC11Q9NYG5 84 aa17.3■□□□□ 0.36
SOD1-203ENST00000470944 KRTAP1-4P0C5Y4 121 aa17.29■□□□□ 0.36
SOD1-203ENST00000470944 MYCBP2O75592 4640 aa17.27■□□□□ 0.36
SOD1-203ENST00000470944 LRP1Q07954 4544 aaKnown RBP17.27■□□□□ 0.36
SOD1-203ENST00000470944 Q6ZQY7 126 aa17.27■□□□□ 0.35
SOD1-203ENST00000470944 A0A1W2PPM0 123 aa17.26■□□□□ 0.35
SOD1-203ENST00000470944 GAGE2AQ6NT46 116 aa17.25■□□□□ 0.35
SOD1-203ENST00000470944 FLG2Q5D862 2391 aaPredicted RBP17.24■□□□□ 0.35
SOD1-203ENST00000470944 TCL1BO95988 128 aa17.24■□□□□ 0.35
SOD1-203ENST00000470944 DEFB105AQ8NG35 78 aa17.24■□□□□ 0.35
SOD1-203ENST00000470944 ZNF706Q9Y5V0 76 aaPredicted RBP17.24■□□□□ 0.35
SOD1-203ENST00000470944 LST1O00453 97 aa17.23■□□□□ 0.35
SOD1-203ENST00000470944 A0A1B0GX51 115 aa17.22■□□□□ 0.35
SOD1-203ENST00000470944 LINC01547P58512 204 aaPredicted RBP17.22■□□□□ 0.35
SOD1-203ENST00000470944 FAT3Q8TDW7 4589 aa17.2■□□□□ 0.34
SOD1-203ENST00000470944 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP17.2■□□□□ 0.34
SOD1-203ENST00000470944 SNCGO76070 127 aa17.19■□□□□ 0.34
SOD1-203ENST00000470944 IGLV5-48A0A075B6I7 105 aa17.18■□□□□ 0.34
SOD1-203ENST00000470944 FABP2P12104 132 aa17.18■□□□□ 0.34
SOD1-203ENST00000470944 LINC00483Q53H64 154 aa17.18■□□□□ 0.34
SOD1-203ENST00000470944 LYRM7Q5U5X0 104 aa17.18■□□□□ 0.34
SOD1-203ENST00000470944 Q8N377 158 aa17.16■□□□□ 0.34
SOD1-203ENST00000470944 A0A087X002 238 aa17.16■□□□□ 0.34
SOD1-203ENST00000470944 TRACP01848 142 aa17.16■□□□□ 0.34
SOD1-203ENST00000470944 ATXN8Q156A1 80 aa17.16■□□□□ 0.34
SOD1-203ENST00000470944 DNAL4O96015 105 aa17.14■□□□□ 0.33
SOD1-203ENST00000470944 SPRR1BP22528 89 aa17.14■□□□□ 0.33
SOD1-203ENST00000470944 TEX49A0A1B0GTD5 131 aa17.13■□□□□ 0.33
SOD1-203ENST00000470944 TRBV20-1A0A075B6N2 111 aa17.13■□□□□ 0.33
SOD1-203ENST00000470944 GTF2H5Q6ZYL4 71 aa17.13■□□□□ 0.33
SOD1-203ENST00000470944 C3orf22Q8N5N4 141 aa17.11■□□□□ 0.33
SOD1-203ENST00000470944 PRR26Q8N8Z3 221 aa17.11■□□□□ 0.33
SOD1-203ENST00000470944 PCLOQ9Y6V0 5065 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms