RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 SNHG12Q9BXW3 62 aa6.93□□□□□ -1.3
SREBF1-209ENST00000470247 PRO1854Q9UHT4 67 aa6.93□□□□□ -1.3
SREBF1-209ENST00000470247 RAB37Q96AX2 223 aa6.92□□□□□ -1.3
SREBF1-209ENST00000470247 TRAV23DV6A0A075B6W5 121 aa6.91□□□□□ -1.3
SREBF1-209ENST00000470247 REG3GQ6UW15 175 aa6.91□□□□□ -1.3
SREBF1-209ENST00000470247 VPS13BQ7Z7G8 4022 aa6.9□□□□□ -1.3
SREBF1-209ENST00000470247 KIAA1109Q2LD37 5005 aa6.9□□□□□ -1.3
SREBF1-209ENST00000470247 ZNF73O43830 326 aaPredicted RBP6.9□□□□□ -1.3
SREBF1-209ENST00000470247 BATFQ16520 125 aa6.9□□□□□ -1.3
SREBF1-209ENST00000470247 KRTAP13-1Q8IUC0 172 aa6.9□□□□□ -1.3
SREBF1-209ENST00000470247 RYR1P21817 5038 aa6.89□□□□□ -1.31
SREBF1-209ENST00000470247 H7C2G1 150 aa6.89□□□□□ -1.31
SREBF1-209ENST00000470247 BCE1O60756 84 aa6.89□□□□□ -1.31
SREBF1-209ENST00000470247 RPL28P46779 137 aaKnown RBP6.89□□□□□ -1.31
SREBF1-209ENST00000470247 C6orf99Q4VX62 202 aa6.89□□□□□ -1.31
SREBF1-209ENST00000470247 C1orf137Q5JT78 98 aa6.89□□□□□ -1.31
SREBF1-209ENST00000470247 BIRC6Q9NR09 4857 aa6.88□□□□□ -1.31
SREBF1-209ENST00000470247 B5MCH6 92 aa6.88□□□□□ -1.31
SREBF1-209ENST00000470247 TSPAN13O95857 204 aa6.88□□□□□ -1.31
SREBF1-209ENST00000470247 RPL37AP61513 92 aaKnown RBP6.88□□□□□ -1.31
SREBF1-209ENST00000470247 C4orf48Q5BLP8 95 aa6.88□□□□□ -1.31
SREBF1-209ENST00000470247 IGLV7-43P04211 117 aa6.87□□□□□ -1.31
SREBF1-209ENST00000470247 Q8N1X5 172 aa6.87□□□□□ -1.31
SREBF1-209ENST00000470247 DIRC1Q969H9 104 aa6.87□□□□□ -1.31
SREBF1-209ENST00000470247 CBY1Q9Y3M2 126 aa6.87□□□□□ -1.31
SREBF1-209ENST00000470247 TRBV7-6A0A0J9YX20 115 aa6.86□□□□□ -1.31
SREBF1-209ENST00000470247 FAM19A1Q7Z5A9 133 aa6.86□□□□□ -1.31
SREBF1-209ENST00000470247 H0Y9J4 135 aa6.85□□□□□ -1.31
SREBF1-209ENST00000470247 TAX1BP3O14907 124 aa6.85□□□□□ -1.31
SREBF1-209ENST00000470247 ZNF861PO60384 105 aa6.85□□□□□ -1.31
SREBF1-209ENST00000470247 ELOF1P60002 83 aaKnown RBP6.85□□□□□ -1.31
SREBF1-209ENST00000470247 PRLHP81277 87 aa6.85□□□□□ -1.31
SREBF1-209ENST00000470247 Q5VSD8 79 aa6.85□□□□□ -1.31
SREBF1-209ENST00000470247 Q6ZRX8 168 aa6.85□□□□□ -1.31
SREBF1-209ENST00000470247 Q9BRP9 147 aa6.85□□□□□ -1.31
SREBF1-209ENST00000470247 ETDCA0A1B0GVM5 59 aa6.84□□□□□ -1.31
SREBF1-209ENST00000470247 FAM229AH3BQW9 127 aa6.84□□□□□ -1.31
SREBF1-209ENST00000470247 TRIAP1O43715 76 aa6.84□□□□□ -1.31
SREBF1-209ENST00000470247 KRTAP4-5Q9BYR2 181 aa6.84□□□□□ -1.31
SREBF1-209ENST00000470247 COX7BP24311 80 aa6.83□□□□□ -1.32
SREBF1-209ENST00000470247 Q1RN00 199 aa6.83□□□□□ -1.32
SREBF1-209ENST00000470247 SMCR5Q8TEV8 140 aa6.83□□□□□ -1.32
SREBF1-209ENST00000470247 NAA38Q9BRA0 125 aaKnown RBP6.83□□□□□ -1.32
SREBF1-209ENST00000470247 ERC2-IT1O76042 136 aa6.82□□□□□ -1.32
SREBF1-209ENST00000470247 PLA2G1BP04054 148 aaKnown RBP6.82□□□□□ -1.32
SREBF1-209ENST00000470247 UBE2AP49459 152 aa6.82□□□□□ -1.32
SREBF1-209ENST00000470247 C9orf118A6NHY6 69 aa6.81□□□□□ -1.32
SREBF1-209ENST00000470247 INAFM2P0DMQ5 153 aa6.81□□□□□ -1.32
SREBF1-209ENST00000470247 COL5A1-AS1Q5SY13 56 aa6.81□□□□□ -1.32
SREBF1-209ENST00000470247 LINC00575Q6W349 94 aa6.81□□□□□ -1.32
SREBF1-209ENST00000470247 FAM218AQ96MZ4 157 aa6.81□□□□□ -1.32
SREBF1-209ENST00000470247 VAMP3Q15836 100 aa6.8□□□□□ -1.32
SREBF1-209ENST00000470247 H0YGX0 51 aa6.79□□□□□ -1.32
SREBF1-209ENST00000470247 H3BUT2 72 aa6.79□□□□□ -1.32
SREBF1-209ENST00000470247 PSMB2P49721 201 aa6.79□□□□□ -1.32
SREBF1-209ENST00000470247 HIGD2AQ9BW72 106 aa6.79□□□□□ -1.32
SREBF1-209ENST00000470247 SPINK6Q6UWN8 80 aa6.78□□□□□ -1.32
SREBF1-209ENST00000470247 CLEC2BQ92478 149 aa6.78□□□□□ -1.32
SREBF1-209ENST00000470247 DHRS4-AS1Q9P1J3 65 aa6.78□□□□□ -1.32
SREBF1-209ENST00000470247 COX6CP09669 75 aa6.77□□□□□ -1.33
SREBF1-209ENST00000470247 hADV29S1A0JD25 119 aa6.76□□□□□ -1.33
SREBF1-209ENST00000470247 SCGB1C2P0DMR2 95 aa6.76□□□□□ -1.33
SREBF1-209ENST00000470247 ST20-AS1Q8NBB2 130 aa6.76□□□□□ -1.33
SREBF1-209ENST00000470247 SRRM2Q9UQ35 2752 aaKnown RBP6.76□□□□□ -1.33
SREBF1-209ENST00000470247 HERC2O95714 4834 aa6.76□□□□□ -1.33
SREBF1-209ENST00000470247 A0A1W2PPM0 123 aa6.75□□□□□ -1.33
SREBF1-209ENST00000470247 KRTAP1-4P0C5Y4 121 aa6.75□□□□□ -1.33
SREBF1-209ENST00000470247 LINC01547P58512 204 aaPredicted RBP6.75□□□□□ -1.33
SREBF1-209ENST00000470247 PKHD1L1Q86WI1 4243 aa6.74□□□□□ -1.33
SREBF1-209ENST00000470247 A0A1B0GX51 115 aa6.74□□□□□ -1.33
SREBF1-209ENST00000470247 LST1O00453 97 aa6.74□□□□□ -1.33
SREBF1-209ENST00000470247 TCL1BO95988 128 aa6.74□□□□□ -1.33
SREBF1-209ENST00000470247 SPRR4Q96PI1 79 aa6.74□□□□□ -1.33
SREBF1-209ENST00000470247 FLG2Q5D862 2391 aaPredicted RBP6.74□□□□□ -1.33
SREBF1-209ENST00000470247 SLC25A20O43772 301 aa6.73□□□□□ -1.33
SREBF1-209ENST00000470247 IGLV5-48A0A075B6I7 105 aa6.72□□□□□ -1.33
SREBF1-209ENST00000470247 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.72□□□□□ -1.33
SREBF1-209ENST00000470247 Q6ZQY7 126 aa6.72□□□□□ -1.33
SREBF1-209ENST00000470247 ANAPC11Q9NYG5 84 aa6.72□□□□□ -1.33
SREBF1-209ENST00000470247 TRACP01848 142 aa6.71□□□□□ -1.34
SREBF1-209ENST00000470247 SPRR1BP22528 89 aa6.71□□□□□ -1.34
SREBF1-209ENST00000470247 LINC00483Q53H64 154 aa6.71□□□□□ -1.34
SREBF1-209ENST00000470247 Q8N377 158 aa6.71□□□□□ -1.34
SREBF1-209ENST00000470247 FABP2P12104 132 aa6.7□□□□□ -1.34
SREBF1-209ENST00000470247 LYRM7Q5U5X0 104 aa6.7□□□□□ -1.34
SREBF1-209ENST00000470247 GAGE2AQ6NT46 116 aa6.7□□□□□ -1.34
SREBF1-209ENST00000470247 TRBV20-1A0A075B6N2 111 aa6.69□□□□□ -1.34
SREBF1-209ENST00000470247 ATXN8Q156A1 80 aa6.69□□□□□ -1.34
SREBF1-209ENST00000470247 SMIM29Q86T20 159 aa6.69□□□□□ -1.34
SREBF1-209ENST00000470247 ZNF706Q9Y5V0 76 aaPredicted RBP6.69□□□□□ -1.34
SREBF1-209ENST00000470247 DEFB105AQ8NG35 78 aa6.68□□□□□ -1.34
SREBF1-209ENST00000470247 A0A087X002 238 aa6.67□□□□□ -1.34
SREBF1-209ENST00000470247 TEX49A0A1B0GTD5 131 aa6.67□□□□□ -1.34
SREBF1-209ENST00000470247 SNCGO76070 127 aa6.67□□□□□ -1.34
SREBF1-209ENST00000470247 SPCS1Q9Y6A9 102 aa6.67□□□□□ -1.34
SREBF1-209ENST00000470247 LRP1Q07954 4544 aaKnown RBP6.66□□□□□ -1.34
SREBF1-209ENST00000470247 FAM229BQ4G0N7 80 aa6.66□□□□□ -1.34
SREBF1-209ENST00000470247 H3BMG7 143 aa6.65□□□□□ -1.34
SREBF1-209ENST00000470247 K7EP34 96 aa6.65□□□□□ -1.34
SREBF1-209ENST00000470247 KRTAP13-2Q52LG2 175 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 402.9 ms