RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 LINC00308Q8TCZ7 52 aa1.51□□□□□ -2.17
VPS50-209ENST00000467326 TP53AIP1Q9HCN2 124 aa1.51□□□□□ -2.17
VPS50-209ENST00000467326 ZNF831Q5JPB2 1677 aa1.51□□□□□ -2.17
VPS50-209ENST00000467326 MYO7AQ13402 2215 aa1.51□□□□□ -2.17
VPS50-209ENST00000467326 C4AP0C0L4 1744 aa1.5□□□□□ -2.17
VPS50-209ENST00000467326 CCL22O00626 93 aa1.5□□□□□ -2.17
VPS50-209ENST00000467326 NDUFA1O15239 70 aa1.5□□□□□ -2.17
VPS50-209ENST00000467326 KRTAP12-1P59990 96 aa1.5□□□□□ -2.17
VPS50-209ENST00000467326 CNFNQ9BYD5 112 aa1.5□□□□□ -2.17
VPS50-209ENST00000467326 PRB1P04280 392 aa1.49□□□□□ -2.17
VPS50-209ENST00000467326 CRIP1P50238 77 aa1.49□□□□□ -2.17
VPS50-209ENST00000467326 PIGYQ3MUY2 71 aa1.49□□□□□ -2.17
VPS50-209ENST00000467326 CDKN2A-AS1Q9UH64 79 aa1.49□□□□□ -2.17
VPS50-209ENST00000467326 DNAJC13O75165 2243 aa1.48□□□□□ -2.17
VPS50-209ENST00000467326 LYNX1G3V0Z9 82 aa1.48□□□□□ -2.17
VPS50-209ENST00000467326 TOGARAM1Q9Y4F4 1720 aa1.48□□□□□ -2.17
VPS50-209ENST00000467326 J3QKU1 62 aa1.47□□□□□ -2.17
VPS50-209ENST00000467326 K7EQZ3 153 aa1.47□□□□□ -2.17
VPS50-209ENST00000467326 NCOA6Q14686 2063 aaPredicted RBP1.47□□□□□ -2.17
VPS50-209ENST00000467326 CACNA1BQ00975 2339 aa1.46□□□□□ -2.18
VPS50-209ENST00000467326 K7EIL1 84 aa1.46□□□□□ -2.18
VPS50-209ENST00000467326 IAPPP10997 89 aa1.46□□□□□ -2.18
VPS50-209ENST00000467326 TFF3Q07654 80 aa1.46□□□□□ -2.18
VPS50-209ENST00000467326 MINOS1Q5TGZ0 78 aa1.46□□□□□ -2.18
VPS50-209ENST00000467326 PRO3102Q9H379 93 aa1.46□□□□□ -2.18
VPS50-209ENST00000467326 FCGBPQ9Y6R7 5405 aaPredicted RBP1.46□□□□□ -2.18
VPS50-209ENST00000467326 ARHGAP5-AS1Q96IT6 56 aa1.45□□□□□ -2.18
VPS50-209ENST00000467326 MED13LQ71F56 2210 aa1.45□□□□□ -2.18
VPS50-209ENST00000467326 ASCC3Q8N3C0 2202 aaKnown RBP1.44□□□□□ -2.18
VPS50-209ENST00000467326 C4BP0C0L5 1744 aa1.44□□□□□ -2.18
VPS50-209ENST00000467326 LYNX1P0DP58 116 aa1.44□□□□□ -2.18
VPS50-209ENST00000467326 MRPL34Q9BQ48 92 aaKnown RBP1.44□□□□□ -2.18
VPS50-209ENST00000467326 C6orf48Q9UBA6 75 aa1.44□□□□□ -2.18
VPS50-209ENST00000467326 ABCA1O95477 2261 aa1.43□□□□□ -2.18
VPS50-209ENST00000467326 F5P12259 2224 aa1.43□□□□□ -2.18
VPS50-209ENST00000467326 PLXNB2O15031 1838 aa1.41□□□□□ -2.18
VPS50-209ENST00000467326 ZFHX3Q15911 3703 aa1.41□□□□□ -2.18
VPS50-209ENST00000467326 SPINK9Q5DT21 86 aa1.41□□□□□ -2.18
VPS50-209ENST00000467326 DEFB123Q8N688 67 aa1.41□□□□□ -2.18
VPS50-209ENST00000467326 TNCP24821 2201 aa1.4□□□□□ -2.19
VPS50-209ENST00000467326 PRB3Q04118 309 aaPredicted RBP1.39□□□□□ -2.19
VPS50-209ENST00000467326 H3BUA1 57 aa1.38□□□□□ -2.19
VPS50-209ENST00000467326 POLR2KP53803 58 aaKnown RBP1.38□□□□□ -2.19
VPS50-209ENST00000467326 TNRC6CQ9HCJ0 1690 aaKnown RBP1.37□□□□□ -2.19
VPS50-209ENST00000467326 DEFB131AP59861 70 aa1.37□□□□□ -2.19
VPS50-209ENST00000467326 Q6ZSA8 131 aa1.37□□□□□ -2.19
VPS50-209ENST00000467326 ANKRD17O75179 2603 aaKnown RBP1.37□□□□□ -2.19
VPS50-209ENST00000467326 IGLV5-48A0A075B6I7 105 aa1.36□□□□□ -2.19
VPS50-209ENST00000467326 I3L2K1 104 aa1.36□□□□□ -2.19
VPS50-209ENST00000467326 TECTAO75443 2155 aa1.36□□□□□ -2.19
VPS50-209ENST00000467326 COX6A2Q02221 97 aa1.36□□□□□ -2.19
VPS50-209ENST00000467326 LINC01590Q5TEZ4 76 aa1.36□□□□□ -2.19
VPS50-209ENST00000467326 WFDC10BQ8IUB3 73 aa1.36□□□□□ -2.19
VPS50-209ENST00000467326 CACNA1CQ13936 2221 aa1.36□□□□□ -2.19
VPS50-209ENST00000467326 MUC6Q6W4X9 2439 aa1.35□□□□□ -2.19
VPS50-209ENST00000467326 KRTAP21-3Q3LHN1 58 aa1.35□□□□□ -2.19
VPS50-209ENST00000467326 RPS27LQ71UM5 84 aaKnown RBP1.35□□□□□ -2.19
VPS50-209ENST00000467326 TTTY10Q9BZA0 68 aa1.35□□□□□ -2.19
VPS50-209ENST00000467326 PRO0255Q9UI72 69 aa1.35□□□□□ -2.19
VPS50-209ENST00000467326 CNTRLQ7Z7A1 2325 aa1.34□□□□□ -2.19
VPS50-209ENST00000467326 FLG2Q5D862 2391 aaPredicted RBP1.34□□□□□ -2.19
VPS50-209ENST00000467326 LOC730098B7Z3J9 87 aa1.34□□□□□ -2.19
VPS50-209ENST00000467326 WFDC13Q8IUB5 93 aa1.34□□□□□ -2.19
VPS50-209ENST00000467326 C10orf95Q9H7T3 257 aa1.34□□□□□ -2.19
VPS50-209ENST00000467326 H0YAA0 97 aa1.33□□□□□ -2.2
VPS50-209ENST00000467326 H1FX-AS1Q4G0G2 97 aa1.33□□□□□ -2.2
VPS50-209ENST00000467326 ASXL3Q9C0F0 2248 aa1.32□□□□□ -2.2
VPS50-209ENST00000467326 RPL39P62891 51 aaKnown RBP1.32□□□□□ -2.2
VPS50-209ENST00000467326 PRCDQ00LT1 54 aa1.32□□□□□ -2.2
VPS50-209ENST00000467326 DEFB109BQ30KR1 87 aa1.32□□□□□ -2.2
VPS50-209ENST00000467326 JMJD1CQ15652 2540 aa1.32□□□□□ -2.2
VPS50-209ENST00000467326 ZDBF2Q9HCK1 2354 aa1.32□□□□□ -2.2
VPS50-209ENST00000467326 FBN3Q75N90 2809 aa1.31□□□□□ -2.2
VPS50-209ENST00000467326 Q5VSD8 79 aa1.31□□□□□ -2.2
VPS50-209ENST00000467326 RPL39LQ96EH5 51 aaKnown RBP1.31□□□□□ -2.2
VPS50-209ENST00000467326 KAAG1Q9UBP8 84 aa1.31□□□□□ -2.2
VPS50-209ENST00000467326 APLNQ9ULZ1 77 aa1.31□□□□□ -2.2
VPS50-209ENST00000467326 CADP27708 2225 aa1.31□□□□□ -2.2
VPS50-209ENST00000467326 DEFB130BP0DP73 79 aa1.3□□□□□ -2.2
VPS50-209ENST00000467326 DEFB130AP0DP74 79 aa1.3□□□□□ -2.2
VPS50-209ENST00000467326 RPS27P42677 84 aaKnown RBP1.3□□□□□ -2.2
VPS50-209ENST00000467326 WT1-ASQ06250 92 aa1.3□□□□□ -2.2
VPS50-209ENST00000467326 KNTC1P50748 2209 aa1.3□□□□□ -2.2
VPS50-209ENST00000467326 DEFB105AQ8NG35 78 aa1.29□□□□□ -2.2
VPS50-209ENST00000467326 NAV3Q8IVL0 2385 aa1.29□□□□□ -2.2
VPS50-209ENST00000467326 FAM208BQ5VWN6 2430 aa1.28□□□□□ -2.2
VPS50-209ENST00000467326 H3BSH0 61 aa1.28□□□□□ -2.2
VPS50-209ENST00000467326 SPRR1AP35321 89 aa1.28□□□□□ -2.2
VPS50-209ENST00000467326 M0QY20 66 aa1.27□□□□□ -2.21
VPS50-209ENST00000467326 NOP10Q9NPE3 64 aaKnown RBP1.27□□□□□ -2.21
VPS50-209ENST00000467326 AHCTF1Q8WYP5 2266 aa1.26□□□□□ -2.21
VPS50-209ENST00000467326 GOLGA4Q13439 2230 aaKnown RBP1.26□□□□□ -2.21
VPS50-209ENST00000467326 A0A0D9SG42 100 aa1.26□□□□□ -2.21
VPS50-209ENST00000467326 URB1O60287 2271 aaKnown RBP1.26□□□□□ -2.21
VPS50-209ENST00000467326 SORL1Q92673 2214 aa1.25□□□□□ -2.21
VPS50-209ENST00000467326 MMP24-AS1A0A0U1RRL7 71 aa1.25□□□□□ -2.21
VPS50-209ENST00000467326 LEAP2Q969E1 77 aa1.25□□□□□ -2.21
VPS50-209ENST00000467326 SPRR1BP22528 89 aa1.24□□□□□ -2.21
VPS50-209ENST00000467326 PRLHP81277 87 aa1.24□□□□□ -2.21
VPS50-209ENST00000467326 TOMM7Q9P0U1 55 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms