RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 PSORS1C2Q9UIG4 136 aa8.21□□□□□ -1.1
PDCD11-202ENST00000466959 CBY1Q9Y3M2 126 aa8.21□□□□□ -1.1
PDCD11-202ENST00000466959 RAB37Q96AX2 223 aa8.2□□□□□ -1.1
PDCD11-202ENST00000466959 NHP2Q9NX24 153 aaKnown RBP8.2□□□□□ -1.1
PDCD11-202ENST00000466959 TRAV23DV6A0A075B6W5 121 aa8.19□□□□□ -1.1
PDCD11-202ENST00000466959 A0A1B0GWB2 263 aa8.19□□□□□ -1.1
PDCD11-202ENST00000466959 RPL13AP40429 203 aaKnown RBP8.19□□□□□ -1.1
PDCD11-202ENST00000466959 RPL37AP61513 92 aaKnown RBP8.19□□□□□ -1.1
PDCD11-202ENST00000466959 REG3GQ6UW15 175 aa8.19□□□□□ -1.1
PDCD11-202ENST00000466959 FAM229AH3BQW9 127 aa8.18□□□□□ -1.1
PDCD11-202ENST00000466959 SPRR1AP35321 89 aa8.17□□□□□ -1.1
PDCD11-202ENST00000466959 C1orf137Q5JT78 98 aa8.17□□□□□ -1.1
PDCD11-202ENST00000466959 PRO1854Q9UHT4 67 aa8.17□□□□□ -1.1
PDCD11-202ENST00000466959 BCE1O60756 84 aa8.16□□□□□ -1.1
PDCD11-202ENST00000466959 PCP4L1A6NKN8 68 aa8.15□□□□□ -1.1
PDCD11-202ENST00000466959 KRTAP4-16G5E9R7 235 aaPredicted RBP8.15□□□□□ -1.1
PDCD11-202ENST00000466959 K7ERJ3 54 aa8.15□□□□□ -1.1
PDCD11-202ENST00000466959 ZNF73O43830 326 aaPredicted RBP8.15□□□□□ -1.1
PDCD11-202ENST00000466959 PLA2G1BP04054 148 aaKnown RBP8.15□□□□□ -1.1
PDCD11-202ENST00000466959 SMIM11BQ8TCY0 68 aa8.15□□□□□ -1.1
PDCD11-202ENST00000466959 FLG2Q5D862 2391 aaPredicted RBP8.14□□□□□ -1.11
PDCD11-202ENST00000466959 ETDCA0A1B0GVM5 59 aa8.14□□□□□ -1.11
PDCD11-202ENST00000466959 KRTAP10-4P60372 401 aaPredicted RBP8.14□□□□□ -1.11
PDCD11-202ENST00000466959 DIRC1Q969H9 104 aa8.14□□□□□ -1.11
PDCD11-202ENST00000466959 H7C2G1 150 aa8.13□□□□□ -1.11
PDCD11-202ENST00000466959 IGLV7-43P04211 117 aa8.13□□□□□ -1.11
PDCD11-202ENST00000466959 BATFQ16520 125 aa8.13□□□□□ -1.11
PDCD11-202ENST00000466959 C6orf99Q4VX62 202 aa8.13□□□□□ -1.11
PDCD11-202ENST00000466959 FAM19A1Q7Z5A9 133 aa8.13□□□□□ -1.11
PDCD11-202ENST00000466959 RPL28P46779 137 aaKnown RBP8.12□□□□□ -1.11
PDCD11-202ENST00000466959 UBE2AP49459 152 aa8.12□□□□□ -1.11
PDCD11-202ENST00000466959 MYCBP2O75592 4640 aa8.12□□□□□ -1.11
PDCD11-202ENST00000466959 VPS13BQ7Z7G8 4022 aa8.11□□□□□ -1.11
PDCD11-202ENST00000466959 TRBV7-6A0A0J9YX20 115 aa8.11□□□□□ -1.11
PDCD11-202ENST00000466959 B5MCH6 92 aa8.11□□□□□ -1.11
PDCD11-202ENST00000466959 Q1RN00 199 aa8.11□□□□□ -1.11
PDCD11-202ENST00000466959 KRTAP13-1Q8IUC0 172 aa8.11□□□□□ -1.11
PDCD11-202ENST00000466959 FAT1Q14517 4588 aa8.1□□□□□ -1.11
PDCD11-202ENST00000466959 H0Y9J4 135 aa8.1□□□□□ -1.11
PDCD11-202ENST00000466959 UBR4Q5T4S7 5183 aa8.09□□□□□ -1.11
PDCD11-202ENST00000466959 ZNF861PO60384 105 aa8.09□□□□□ -1.11
PDCD11-202ENST00000466959 TSPAN13O95857 204 aa8.09□□□□□ -1.11
PDCD11-202ENST00000466959 COX7BP24311 80 aa8.09□□□□□ -1.11
PDCD11-202ENST00000466959 ELOF1P60002 83 aaKnown RBP8.09□□□□□ -1.11
PDCD11-202ENST00000466959 PRLHP81277 87 aa8.09□□□□□ -1.11
PDCD11-202ENST00000466959 Q6ZRX8 168 aa8.09□□□□□ -1.11
PDCD11-202ENST00000466959 SNHG12Q9BXW3 62 aa8.09□□□□□ -1.11
PDCD11-202ENST00000466959 VAMP3Q15836 100 aa8.08□□□□□ -1.12
PDCD11-202ENST00000466959 TRIAP1O43715 76 aa8.06□□□□□ -1.12
PDCD11-202ENST00000466959 PSMB2P49721 201 aa8.05□□□□□ -1.12
PDCD11-202ENST00000466959 SPINK6Q6UWN8 80 aa8.05□□□□□ -1.12
PDCD11-202ENST00000466959 SMCR5Q8TEV8 140 aa8.05□□□□□ -1.12
PDCD11-202ENST00000466959 Q9BRP9 147 aa8.05□□□□□ -1.12
PDCD11-202ENST00000466959 HIGD2AQ9BW72 106 aa8.05□□□□□ -1.12
PDCD11-202ENST00000466959 H0YGX0 51 aa8.04□□□□□ -1.12
PDCD11-202ENST00000466959 DHRS4-AS1Q9P1J3 65 aa8.04□□□□□ -1.12
PDCD11-202ENST00000466959 PKHD1L1Q86WI1 4243 aa8.04□□□□□ -1.12
PDCD11-202ENST00000466959 COL5A1-AS1Q5SY13 56 aa8.03□□□□□ -1.12
PDCD11-202ENST00000466959 TAX1BP3O14907 124 aa8.02□□□□□ -1.13
PDCD11-202ENST00000466959 COX6CP09669 75 aa8.02□□□□□ -1.13
PDCD11-202ENST00000466959 LINC00575Q6W349 94 aa8.02□□□□□ -1.13
PDCD11-202ENST00000466959 SLC25A20O43772 301 aa8.01□□□□□ -1.13
PDCD11-202ENST00000466959 ERC2-IT1O76042 136 aa8.01□□□□□ -1.13
PDCD11-202ENST00000466959 NAA38Q9BRA0 125 aaKnown RBP8.01□□□□□ -1.13
PDCD11-202ENST00000466959 C9orf118A6NHY6 69 aa8□□□□□ -1.13
PDCD11-202ENST00000466959 KRTAP29-1A8MX34 341 aaPredicted RBP8□□□□□ -1.13
PDCD11-202ENST00000466959 hADV29S1A0JD25 119 aa7.99□□□□□ -1.13
PDCD11-202ENST00000466959 H3BUT2 72 aa7.98□□□□□ -1.13
PDCD11-202ENST00000466959 SCGB1C2P0DMR2 95 aa7.98□□□□□ -1.13
PDCD11-202ENST00000466959 CLEC2BQ92478 149 aa7.98□□□□□ -1.13
PDCD11-202ENST00000466959 FAM218AQ96MZ4 157 aa7.98□□□□□ -1.13
PDCD11-202ENST00000466959 ZNF706Q9Y5V0 76 aaPredicted RBP7.98□□□□□ -1.13
PDCD11-202ENST00000466959 A0A1B0GX51 115 aa7.97□□□□□ -1.13
PDCD11-202ENST00000466959 SNCGO76070 127 aa7.97□□□□□ -1.13
PDCD11-202ENST00000466959 LYRM7Q5U5X0 104 aa7.97□□□□□ -1.13
PDCD11-202ENST00000466959 SPRR4Q96PI1 79 aa7.97□□□□□ -1.13
PDCD11-202ENST00000466959 ST20-AS1Q8NBB2 130 aa7.95□□□□□ -1.14
PDCD11-202ENST00000466959 A0A1W2PPM0 123 aa7.94□□□□□ -1.14
PDCD11-202ENST00000466959 LST1O00453 97 aa7.94□□□□□ -1.14
PDCD11-202ENST00000466959 KRTAP1-4P0C5Y4 121 aa7.94□□□□□ -1.14
PDCD11-202ENST00000466959 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.94□□□□□ -1.14
PDCD11-202ENST00000466959 LINC00483Q53H64 154 aa7.93□□□□□ -1.14
PDCD11-202ENST00000466959 Q6ZQY7 126 aa7.93□□□□□ -1.14
PDCD11-202ENST00000466959 IGLV5-48A0A075B6I7 105 aa7.92□□□□□ -1.14
PDCD11-202ENST00000466959 TCL1BO95988 128 aa7.92□□□□□ -1.14
PDCD11-202ENST00000466959 TRACP01848 142 aa7.92□□□□□ -1.14
PDCD11-202ENST00000466959 FABP2P12104 132 aa7.92□□□□□ -1.14
PDCD11-202ENST00000466959 GAGE2AQ6NT46 116 aa7.92□□□□□ -1.14
PDCD11-202ENST00000466959 TRBV20-1A0A075B6N2 111 aa7.91□□□□□ -1.14
PDCD11-202ENST00000466959 DNAL4O96015 105 aa7.91□□□□□ -1.14
PDCD11-202ENST00000466959 SPRR1BP22528 89 aa7.91□□□□□ -1.14
PDCD11-202ENST00000466959 LINC01547P58512 204 aaPredicted RBP7.91□□□□□ -1.14
PDCD11-202ENST00000466959 ATXN8Q156A1 80 aa7.91□□□□□ -1.14
PDCD11-202ENST00000466959 FAM229BQ4G0N7 80 aa7.91□□□□□ -1.14
PDCD11-202ENST00000466959 TEX49A0A1B0GTD5 131 aa7.9□□□□□ -1.14
PDCD11-202ENST00000466959 OCIAD2Q56VL3 154 aa7.9□□□□□ -1.14
PDCD11-202ENST00000466959 DEFB105AQ8NG35 78 aa7.9□□□□□ -1.14
PDCD11-202ENST00000466959 ANAPC11Q9NYG5 84 aa7.9□□□□□ -1.14
PDCD11-202ENST00000466959 OXTP01178 125 aa7.88□□□□□ -1.15
PDCD11-202ENST00000466959 Q8N377 158 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms