RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 SAMD9Q5K651 1589 aa-0.99□□□□□ -2.57
SMC4-205ENST00000465563 S100PP25815 95 aa-0.99□□□□□ -2.57
SMC4-205ENST00000465563 CRYBG1Q9Y4K1 1723 aa-0.99□□□□□ -2.57
SMC4-205ENST00000465563 RAPGEF2Q9Y4G8 1499 aa-0.99□□□□□ -2.57
SMC4-205ENST00000465563 COL12A1Q99715 3063 aa-1□□□□□ -2.57
SMC4-205ENST00000465563 PEG3Q9GZU2 1588 aa-1□□□□□ -2.57
SMC4-205ENST00000465563 BCORQ6W2J9 1755 aa-1□□□□□ -2.57
SMC4-205ENST00000465563 ZZEF1O43149 2961 aa-1□□□□□ -2.57
SMC4-205ENST00000465563 TMEM218A2RU14 115 aa-1□□□□□ -2.57
SMC4-205ENST00000465563 GNGT1P63211 74 aa-1□□□□□ -2.57
SMC4-205ENST00000465563 LELP1Q5T871 98 aa-1□□□□□ -2.57
SMC4-205ENST00000465563 PMCHL2Q9BQD1 86 aa-1□□□□□ -2.57
SMC4-205ENST00000465563 DNAH11Q96DT5 4516 aa-1□□□□□ -2.57
SMC4-205ENST00000465563 ABCC2Q92887 1545 aa-1□□□□□ -2.57
SMC4-205ENST00000465563 GCN1Q92616 2671 aaKnown RBP-1.01□□□□□ -2.57
SMC4-205ENST00000465563 TRAV30A0A087WSZ9 112 aa-1.01□□□□□ -2.57
SMC4-205ENST00000465563 K7EP34 96 aa-1.01□□□□□ -2.57
SMC4-205ENST00000465563 UQCRHP07919 91 aa-1.01□□□□□ -2.57
SMC4-205ENST00000465563 SERP2Q8N6R1 65 aa-1.01□□□□□ -2.57
SMC4-205ENST00000465563 APOBP04114 4563 aaKnown RBP-1.01□□□□□ -2.57
SMC4-205ENST00000465563 PDE4DIPQ5VU43 2346 aa-1.01□□□□□ -2.57
SMC4-205ENST00000465563 PKD1L2Q7Z442 2459 aa-1.01□□□□□ -2.57
SMC4-205ENST00000465563 DNAH1Q9P2D7 4330 aa-1.02□□□□□ -2.57
SMC4-205ENST00000465563 C9orf92A6NGG3 77 aa-1.02□□□□□ -2.57
SMC4-205ENST00000465563 H0YAA0 97 aa-1.02□□□□□ -2.57
SMC4-205ENST00000465563 DEFB1P60022 68 aa-1.02□□□□□ -2.57
SMC4-205ENST00000465563 A0A0C4DFX4 3053 aa-1.02□□□□□ -2.57
SMC4-205ENST00000465563 MTORP42345 2549 aa-1.03□□□□□ -2.57
SMC4-205ENST00000465563 CCDC168Q8NDH2 2452 aa-1.03□□□□□ -2.57
SMC4-205ENST00000465563 QSER1Q2KHR3 1735 aa-1.03□□□□□ -2.57
SMC4-205ENST00000465563 TEX14Q8IWB6 1497 aa-1.03□□□□□ -2.57
SMC4-205ENST00000465563 ANKRD50Q9ULJ7 1429 aa-1.03□□□□□ -2.57
SMC4-205ENST00000465563 ATOX1O00244 68 aa-1.03□□□□□ -2.57
SMC4-205ENST00000465563 ITPR1Q14643 2758 aa-1.03□□□□□ -2.57
SMC4-205ENST00000465563 RELNP78509 3460 aa-1.03□□□□□ -2.58
SMC4-205ENST00000465563 PTPN23Q9H3S7 1636 aa-1.04□□□□□ -2.58
SMC4-205ENST00000465563 TRIOO75962 3097 aa-1.04□□□□□ -2.58
SMC4-205ENST00000465563 TRANK1O15050 2925 aa-1.04□□□□□ -2.58
SMC4-205ENST00000465563 CMYA5Q8N3K9 4069 aa-1.04□□□□□ -2.58
SMC4-205ENST00000465563 DYNC1H1Q14204 4646 aaKnown RBP-1.04□□□□□ -2.58
SMC4-205ENST00000465563 S100A10P60903 97 aa-1.04□□□□□ -2.58
SMC4-205ENST00000465563 HEPN1Q6WQI6 88 aa-1.04□□□□□ -2.58
SMC4-205ENST00000465563 SACSQ9NZJ4 4579 aa-1.04□□□□□ -2.58
SMC4-205ENST00000465563 ADAMTS12P58397 1594 aa-1.04□□□□□ -2.58
SMC4-205ENST00000465563 FYCO1Q9BQS8 1478 aa-1.05□□□□□ -2.58
SMC4-205ENST00000465563 PKD1L3Q7Z443 1732 aa-1.05□□□□□ -2.58
SMC4-205ENST00000465563 CLTCQ00610 1675 aaKnown RBP-1.05□□□□□ -2.58
SMC4-205ENST00000465563 CHD7Q9P2D1 2997 aa-1.05□□□□□ -2.58
SMC4-205ENST00000465563 TRBV7-7A0A0K0K1E9 115 aa-1.06□□□□□ -2.58
SMC4-205ENST00000465563 CCL22O00626 93 aa-1.06□□□□□ -2.58
SMC4-205ENST00000465563 PSENENQ9NZ42 101 aa-1.06□□□□□ -2.58
SMC4-205ENST00000465563 FRYQ5TBA9 3013 aa-1.07□□□□□ -2.58
SMC4-205ENST00000465563 UBR3Q6ZT12 1888 aa-1.07□□□□□ -2.58
SMC4-205ENST00000465563 CEP295Q9C0D2 2601 aa-1.07□□□□□ -2.58
SMC4-205ENST00000465563 ATP6V1G2-DDX39BF2Z307 99 aa-1.07□□□□□ -2.58
SMC4-205ENST00000465563 MT1HL1P0DM35 61 aa-1.07□□□□□ -2.58
SMC4-205ENST00000465563 MT1XP80297 61 aa-1.07□□□□□ -2.58
SMC4-205ENST00000465563 HMGN3Q15651 99 aa-1.07□□□□□ -2.58
SMC4-205ENST00000465563 DEFB110Q30KQ9 67 aa-1.07□□□□□ -2.58
SMC4-205ENST00000465563 TCEAL7Q9BRU2 100 aa-1.07□□□□□ -2.58
SMC4-205ENST00000465563 CLIP1P30622 1438 aa-1.07□□□□□ -2.58
SMC4-205ENST00000465563 NBEAL2Q6ZNJ1 2754 aa-1.08□□□□□ -2.58
SMC4-205ENST00000465563 SPTY2D1-AS1A0A0U1RR47 76 aa-1.08□□□□□ -2.58
SMC4-205ENST00000465563 WFDC13Q8IUB5 93 aa-1.08□□□□□ -2.58
SMC4-205ENST00000465563 CDKN2A-AS1Q9UH64 79 aa-1.08□□□□□ -2.58
SMC4-205ENST00000465563 S4R3F8 94 aa-1.08□□□□□ -2.58
SMC4-205ENST00000465563 CNTLNQ9NXG0 1405 aa-1.08□□□□□ -2.58
SMC4-205ENST00000465563 F8WEM9 126 aa-1.09□□□□□ -2.58
SMC4-205ENST00000465563 IGLC2P0DOY2 106 aa-1.09□□□□□ -2.58
SMC4-205ENST00000465563 IGLC3P0DOY3 106 aa-1.09□□□□□ -2.58
SMC4-205ENST00000465563 RBP2P50120 134 aa-1.09□□□□□ -2.58
SMC4-205ENST00000465563 ALKAL2Q6UX46 152 aa-1.09□□□□□ -2.58
SMC4-205ENST00000465563 AP4S1Q9Y587 144 aa-1.09□□□□□ -2.58
SMC4-205ENST00000465563 COL6A5A8TX70 2615 aa-1.09□□□□□ -2.58
SMC4-205ENST00000465563 ANKRD26Q9UPS8 1709 aa-1.09□□□□□ -2.58
SMC4-205ENST00000465563 DNAH7Q8WXX0 4024 aa-1.1□□□□□ -2.59
SMC4-205ENST00000465563 ETDBQ3ZM63 59 aa-1.1□□□□□ -2.59
SMC4-205ENST00000465563 HIGD1BQ9P298 99 aa-1.1□□□□□ -2.59
SMC4-205ENST00000465563 C5orf42Q9H799 3197 aa-1.1□□□□□ -2.59
SMC4-205ENST00000465563 EPRSP07814 1512 aaKnown RBP-1.1□□□□□ -2.59
SMC4-205ENST00000465563 CEP290O15078 2479 aa-1.11□□□□□ -2.59
SMC4-205ENST00000465563 LINC00032P0C843 101 aa-1.11□□□□□ -2.59
SMC4-205ENST00000465563 ACBD7Q8N6N7 88 aa-1.11□□□□□ -2.59
SMC4-205ENST00000465563 DPY30Q9C005 99 aa-1.11□□□□□ -2.59
SMC4-205ENST00000465563 FAM186AA6NE01 2351 aa-1.11□□□□□ -2.59
SMC4-205ENST00000465563 CICQ96RK0 1608 aaPredicted RBP-1.11□□□□□ -2.59
SMC4-205ENST00000465563 ALKQ9UM73 1620 aa-1.11□□□□□ -2.59
SMC4-205ENST00000465563 EYSQ5T1H1 3165 aa-1.12□□□□□ -2.59
SMC4-205ENST00000465563 ACACBO00763 2458 aa-1.12□□□□□ -2.59
SMC4-205ENST00000465563 SRCAPQ6ZRS2 3230 aa-1.12□□□□□ -2.59
SMC4-205ENST00000465563 CSMD1Q96PZ7 3565 aa-1.12□□□□□ -2.59
SMC4-205ENST00000465563 D6R8Y8 96 aa-1.12□□□□□ -2.59
SMC4-205ENST00000465563 MUSTN1Q8IVN3 82 aa-1.12□□□□□ -2.59
SMC4-205ENST00000465563 RGPD1P0DJD0 1748 aa-1.12□□□□□ -2.59
SMC4-205ENST00000465563 UBR1Q8IWV7 1749 aa-1.12□□□□□ -2.59
SMC4-205ENST00000465563 FANCAO15360 1455 aa-1.12□□□□□ -2.59
SMC4-205ENST00000465563 MAGI2Q86UL8 1455 aa-1.12□□□□□ -2.59
SMC4-205ENST00000465563 PREX1Q8TCU6 1659 aa-1.13□□□□□ -2.59
SMC4-205ENST00000465563 CFAP46Q8IYW2 2715 aa-1.13□□□□□ -2.59
SMC4-205ENST00000465563 KRTAP19-5Q3LI72 72 aa-1.13□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms