RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 SPTY2D1-AS1A0A0U1RR47 76 aa1.41□□□□□ -2.18
HMGXB4-205ENST00000464480 M0QY20 66 aa1.41□□□□□ -2.18
HMGXB4-205ENST00000464480 ANGP03950 147 aaKnown RBP1.41□□□□□ -2.18
HMGXB4-205ENST00000464480 RPL37AP61513 92 aaKnown RBP1.41□□□□□ -2.18
HMGXB4-205ENST00000464480 PRB3Q04118 309 aaPredicted RBP1.41□□□□□ -2.18
HMGXB4-205ENST00000464480 WT1-ASQ06250 92 aa1.41□□□□□ -2.18
HMGXB4-205ENST00000464480 LEAP2Q969E1 77 aa1.41□□□□□ -2.18
HMGXB4-205ENST00000464480 F5P12259 2224 aa1.41□□□□□ -2.18
HMGXB4-205ENST00000464480 CADP27708 2225 aa1.4□□□□□ -2.18
HMGXB4-205ENST00000464480 MED13LQ71F56 2210 aa1.4□□□□□ -2.18
HMGXB4-205ENST00000464480 OTOGLQ3ZCN5 2332 aa1.4□□□□□ -2.18
HMGXB4-205ENST00000464480 A0A087WTM6 91 aa1.4□□□□□ -2.19
HMGXB4-205ENST00000464480 DEFB108AA8MXU0 73 aa1.4□□□□□ -2.19
HMGXB4-205ENST00000464480 M0R2N4 97 aa1.4□□□□□ -2.19
HMGXB4-205ENST00000464480 CCL19Q99731 98 aa1.4□□□□□ -2.19
HMGXB4-205ENST00000464480 LINC00472Q9H8W2 130 aa1.4□□□□□ -2.19
HMGXB4-205ENST00000464480 NBDYA0A0U1RRE5 68 aa1.39□□□□□ -2.19
HMGXB4-205ENST00000464480 H0YGG7 62 aa1.39□□□□□ -2.19
HMGXB4-205ENST00000464480 I3L2K1 104 aa1.39□□□□□ -2.19
HMGXB4-205ENST00000464480 K7EIM0 57 aa1.39□□□□□ -2.19
HMGXB4-205ENST00000464480 LY6G6CO95867 125 aa1.39□□□□□ -2.19
HMGXB4-205ENST00000464480 STATHP02808 62 aa1.39□□□□□ -2.19
HMGXB4-205ENST00000464480 C5orf56Q8N8D9 126 aa1.39□□□□□ -2.19
HMGXB4-205ENST00000464480 KMT2BQ9UMN6 2715 aaPredicted RBP1.39□□□□□ -2.19
HMGXB4-205ENST00000464480 RP1P56715 2156 aa1.38□□□□□ -2.19
HMGXB4-205ENST00000464480 ZFHX3Q15911 3703 aa1.38□□□□□ -2.19
HMGXB4-205ENST00000464480 SORL1Q92673 2214 aa1.38□□□□□ -2.19
HMGXB4-205ENST00000464480 IGLV5-48A0A075B6I7 105 aa1.38□□□□□ -2.19
HMGXB4-205ENST00000464480 A0A096LNT2 108 aa1.38□□□□□ -2.19
HMGXB4-205ENST00000464480 K7EQZ3 153 aa1.38□□□□□ -2.19
HMGXB4-205ENST00000464480 TPRXLQ17RH7 258 aa1.38□□□□□ -2.19
HMGXB4-205ENST00000464480 MINOS1Q5TGZ0 78 aa1.38□□□□□ -2.19
HMGXB4-205ENST00000464480 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.38□□□□□ -2.19
HMGXB4-205ENST00000464480 SSBP3-AS1Q7Z2R9 100 aa1.38□□□□□ -2.19
HMGXB4-205ENST00000464480 COX14Q96I36 57 aa1.38□□□□□ -2.19
HMGXB4-205ENST00000464480 Q96NJ1 140 aa1.38□□□□□ -2.19
HMGXB4-205ENST00000464480 TOMM7Q9P0U1 55 aa1.38□□□□□ -2.19
HMGXB4-205ENST00000464480 URB1O60287 2271 aaKnown RBP1.37□□□□□ -2.19
HMGXB4-205ENST00000464480 CNTRLQ7Z7A1 2325 aa1.37□□□□□ -2.19
HMGXB4-205ENST00000464480 KNL1Q8NG31 2342 aa1.37□□□□□ -2.19
HMGXB4-205ENST00000464480 PTPRQQ9UMZ3 2332 aa1.37□□□□□ -2.19
HMGXB4-205ENST00000464480 LYNX1G3V0Z9 82 aa1.37□□□□□ -2.19
HMGXB4-205ENST00000464480 KRTAP21-3Q3LHN1 58 aa1.37□□□□□ -2.19
HMGXB4-205ENST00000464480 C10orf55Q5SWW7 151 aa1.37□□□□□ -2.19
HMGXB4-205ENST00000464480 C6orf48Q9UBA6 75 aa1.37□□□□□ -2.19
HMGXB4-205ENST00000464480 COL4A5P29400 1685 aa1.36□□□□□ -2.19
HMGXB4-205ENST00000464480 COX6A2Q02221 97 aa1.36□□□□□ -2.19
HMGXB4-205ENST00000464480 WFDC10BQ8IUB3 73 aa1.36□□□□□ -2.19
HMGXB4-205ENST00000464480 WFDC13Q8IUB5 93 aa1.36□□□□□ -2.19
HMGXB4-205ENST00000464480 RTTNQ86VV8 2226 aa1.36□□□□□ -2.19
HMGXB4-205ENST00000464480 DEFB131AP59861 70 aa1.35□□□□□ -2.19
HMGXB4-205ENST00000464480 PRO3102Q9H379 93 aa1.35□□□□□ -2.19
HMGXB4-205ENST00000464480 COX6B2Q6YFQ2 88 aa1.34□□□□□ -2.19
HMGXB4-205ENST00000464480 CRIPTQ9P021 101 aa1.34□□□□□ -2.19
HMGXB4-205ENST00000464480 PLCE1Q9P212 2302 aa1.34□□□□□ -2.2
HMGXB4-205ENST00000464480 Q6ZRX8 168 aa1.33□□□□□ -2.2
HMGXB4-205ENST00000464480 ASCC3Q8N3C0 2202 aaKnown RBP1.33□□□□□ -2.2
HMGXB4-205ENST00000464480 ASXL3Q9C0F0 2248 aa1.32□□□□□ -2.2
HMGXB4-205ENST00000464480 DOPEY2Q9Y3R5 2298 aa1.32□□□□□ -2.2
HMGXB4-205ENST00000464480 INE1O15225 51 aa1.32□□□□□ -2.2
HMGXB4-205ENST00000464480 KLK9Q2XQG4 91 aa1.32□□□□□ -2.2
HMGXB4-205ENST00000464480 Q6ZRN7 208 aaPredicted RBP1.32□□□□□ -2.2
HMGXB4-205ENST00000464480 DEFB123Q8N688 67 aa1.32□□□□□ -2.2
HMGXB4-205ENST00000464480 DEFB119Q8N690 84 aa1.32□□□□□ -2.2
HMGXB4-205ENST00000464480 SPACA4Q8TDM5 124 aa1.32□□□□□ -2.2
HMGXB4-205ENST00000464480 DEFB104AQ8WTQ1 72 aa1.32□□□□□ -2.2
HMGXB4-205ENST00000464480 PLAC4Q8WY50 150 aa1.32□□□□□ -2.2
HMGXB4-205ENST00000464480 USMG5Q96IX5 58 aa1.32□□□□□ -2.2
HMGXB4-205ENST00000464480 MRPL34Q9BQ48 92 aaKnown RBP1.32□□□□□ -2.2
HMGXB4-205ENST00000464480 KAAG1Q9UBP8 84 aa1.32□□□□□ -2.2
HMGXB4-205ENST00000464480 EP400Q96L91 3159 aa1.32□□□□□ -2.2
HMGXB4-205ENST00000464480 BPTFQ12830 3046 aa1.31□□□□□ -2.2
HMGXB4-205ENST00000464480 BRWD1Q9NSI6 2320 aa1.31□□□□□ -2.2
HMGXB4-205ENST00000464480 GVQW2A0A096LPI5 108 aaPredicted RBP1.31□□□□□ -2.2
HMGXB4-205ENST00000464480 Q9Y3F1 56 aa1.31□□□□□ -2.2
HMGXB4-205ENST00000464480 AHCTF1Q8WYP5 2266 aa1.31□□□□□ -2.2
HMGXB4-205ENST00000464480 MMP24-AS1A0A0U1RRL7 71 aa1.3□□□□□ -2.2
HMGXB4-205ENST00000464480 G3V318 75 aa1.3□□□□□ -2.2
HMGXB4-205ENST00000464480 APELAP0DMC3 54 aa1.3□□□□□ -2.2
HMGXB4-205ENST00000464480 KRTAP21-2Q3LI59 83 aa1.3□□□□□ -2.2
HMGXB4-205ENST00000464480 NAV3Q8IVL0 2385 aa1.3□□□□□ -2.2
HMGXB4-205ENST00000464480 ZFHX2Q9C0A1 2572 aaPredicted RBP1.3□□□□□ -2.2
HMGXB4-205ENST00000464480 ANKRD17O75179 2603 aaKnown RBP1.3□□□□□ -2.2
HMGXB4-205ENST00000464480 TECTAO75443 2155 aa1.3□□□□□ -2.2
HMGXB4-205ENST00000464480 CNOT1A5YKK6 2376 aaKnown RBP1.29□□□□□ -2.2
HMGXB4-205ENST00000464480 DEFB110Q30KQ9 67 aa1.29□□□□□ -2.2
HMGXB4-205ENST00000464480 C10orf99Q6UWK7 81 aa1.29□□□□□ -2.2
HMGXB4-205ENST00000464480 UBE2DNLQ8IWF7 75 aa1.29□□□□□ -2.2
HMGXB4-205ENST00000464480 SRCAPQ6ZRS2 3230 aa1.29□□□□□ -2.2
HMGXB4-205ENST00000464480 CACNA1BQ00975 2339 aa1.29□□□□□ -2.2
HMGXB4-205ENST00000464480 FN1P02751 2386 aaKnown RBP1.28□□□□□ -2.2
HMGXB4-205ENST00000464480 A8MTW9 85 aa1.28□□□□□ -2.2
HMGXB4-205ENST00000464480 H3BUA1 57 aa1.28□□□□□ -2.2
HMGXB4-205ENST00000464480 SPINK13Q1W4C9 94 aa1.28□□□□□ -2.2
HMGXB4-205ENST00000464480 DEFB109BQ30KR1 87 aa1.28□□□□□ -2.2
HMGXB4-205ENST00000464480 DEFB105AQ8NG35 78 aa1.28□□□□□ -2.2
HMGXB4-205ENST00000464480 CACNA1EQ15878 2313 aa1.28□□□□□ -2.2
HMGXB4-205ENST00000464480 MUC6Q6W4X9 2439 aa1.28□□□□□ -2.2
HMGXB4-205ENST00000464480 AHNAKQ09666 5890 aaKnown RBP1.27□□□□□ -2.21
HMGXB4-205ENST00000464480 ABCA1O95477 2261 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms